Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_F23
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 119 2e-27
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 119 2e-27
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 119 2e-27
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 119 2e-27
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 119 2e-27
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 71 8e-13
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 68 4e-12
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 68 4e-12
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 54 9e-08
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 48 3e-06
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 45 3e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.004
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 38 0.005
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 35 0.035
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 33 0.14
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 33 0.14
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 33 0.14
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 30 0.99
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.3
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 2.3
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 2.3
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 2.3
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 2.3
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 4.0
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 7.0
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 391 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 141
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 391 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 543 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 695 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 771 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 239 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 315 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 391 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 467 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 543 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 619 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 695 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 118 bits (283), Expect = 4e-27
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK+STLHLV
Sbjct: 771 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 119 bits (286), Expect = 2e-27
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+ I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 11 KEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 70.5 bits (165), Expect = 8e-13
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TI + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 171 KTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 43 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 207
+ VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL L
Sbjct: 103 ITVEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTLRL 153
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 68.1 bits (159), Expect = 4e-12
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +2
Query: 314 FTRXDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMV 448
+ + DENGKI RLR+EC CG GVFMA +RHYCG+CH T+V
Sbjct: 99 YYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLV 143
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/97 (36%), Positives = 52/97 (53%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
RT+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I E+T+++
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVN 64
Query: 211 XXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYK 321
Y+TP LAVL++YK
Sbjct: 65 LELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYK 101
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 68.1 bits (159), Expect = 4e-12
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +2
Query: 314 FTRXDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMV 448
+ + DENGKI RLR+EC CG GVFMA +RHYCG+CH T+V
Sbjct: 99 YYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLV 143
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/97 (36%), Positives = 52/97 (53%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
RT+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I E+T+++
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVN 64
Query: 211 XXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYK 321
Y+TP LAVL++YK
Sbjct: 65 LELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYK 101
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 53.6 bits (123), Expect = 9e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIP 111
+TITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 11 KTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +1
Query: 46 EVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 201
++ DT+ ++K I+ + IP + L F+GK+LED ++ DYNIQK ST+
Sbjct: 168 KIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 45.2 bits (102), Expect = 3e-05
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLSDYNIQKESTL 201
RT TL+ SDT+ +VKAKI +K I PN Q+L+ L+ D TL D + + STL
Sbjct: 112 RTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGSTL 171
Query: 202 HL 207
L
Sbjct: 172 RL 173
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +1
Query: 43 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 207
L V SDTI VK I + + R++ K LED TL+ YNIQ+ STL L
Sbjct: 187 LWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 43 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 207
L V SDTI ++K +I + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 43 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 201
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 144
RT+ LEV ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 9 RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 35.1 bits (77), Expect = 0.035
Identities = 15/58 (25%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 201
+ I +E++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I ++ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 177
R ++ +++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 153 RLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/57 (22%), Positives = 33/57 (57%)
Frame = +1
Query: 37 ITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 207
+ ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 589 VQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/57 (22%), Positives = 33/57 (57%)
Frame = +1
Query: 37 ITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 207
+ ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 589 VQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 30.3 bits (65), Expect = 0.99
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 37 ITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 201
I +E++ DTI V + G+ ++QRL+ K+L+ +TL + I+ S +
Sbjct: 194 IPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = +3
Query: 270 DQAQEEEGQTSRPQVLQGSTRTVRSTVCGASARASSAAPECSWR*WRTVTTAGSVTARWS 449
DQ+ +T+R +G+T ++ G++ R+SS P + T T + + S
Sbjct: 155 DQSSTSPHETTRDTTTEGTTSEDSTSTYGSTERSSSPKPTSE---FSTSTESDFTESTRS 211
Query: 450 SKTTTNK*VPSSL*ETLATAVYD 518
S+TT++ SS T YD
Sbjct: 212 SETTSSIETNSSTSPVSTTPEYD 234
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 214 STPGGGWIPSGYCSPRGYVHLPAAFQQ 134
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 214 STPGGGWIPSGYCSPRGYVHLPAAFQQ 134
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 214 STPGGGWIPSGYCSPRGYVHLPAAFQQ 134
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 214 STPGGGWIPSGYCSPRGYVHLPAAFQQ 134
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 214 STPGGGWIPSGYCSPRGYVHLPAAFQQ 134
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 214 STPGGGWIPSGYCSPRGYVHLPAAFQQ 134
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 214 STPGGGWIPSGYCSPRGYVHLPAAFQQ 134
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 214 STPGGGWIPSGYCSPRGYVHLPAAFQQ 134
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -2
Query: 553 APTLCQDFI*NPSYTAVASVSYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 407
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -2
Query: 553 APTLCQDFI*NPSYTAVASVSYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 407
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 214 STPGGGWIPSGYCSPRGYVHLPAAFQQ 134
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -2
Query: 553 APTLCQDFI*NPSYTAVASVSYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 407
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 321 GSTRTVRSTVCGASARASSAAPECSWR*WRTV--TTAGSVTARWSSKTTTNK*VPSSL*E 494
GST T STV G++A SS + S TV ++A +VT+ S T+ V S
Sbjct: 1021 GSTVTGESTVSGSTASTSSGSTGSSTEAGSTVSGSSASTVTSSTGSSTSGESTVSGSTVS 1080
Query: 495 TLA 503
T++
Sbjct: 1081 TVS 1083
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 7.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 127 LIFAGKQLEDGRTLSDYNIQKESTLHL 207
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,229,508
Number of Sequences: 27780
Number of extensions: 238889
Number of successful extensions: 776
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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