Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_F23
(560 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 2.8
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 22 4.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 4.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.4
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 6.4
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L G+Y ++F +V L +V + HHR
Sbjct: 256 LLGSYFNCIMFMVASSVVLTVLVLIFHHR 284
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L G+Y ++F +V L +V + HHR
Sbjct: 256 LLGSYFNCIMFMVASSVVLTVLVLIFHHR 284
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L G+Y ++F +V L +V + HHR
Sbjct: 256 LLGSYFNCIMFMVASSVVLTVLVLIFHHR 284
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L G+Y ++F +V L +V + HHR
Sbjct: 256 LIGSYFNCIMFMVASSVVLTVLVLIFHHR 284
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L G+Y ++F +V L +V + HHR
Sbjct: 256 LIGSYFNCIMFMVASSVVLTVLVLIFHHR 284
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L G+Y ++F +V L +V + HHR
Sbjct: 256 LIGSYFNCIMFMVASSVVLTVLVLIFHHR 284
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 444 WSSKTTTNK*VPSSL*ETLATAVYD 518
WSSKT TN V S+ + + YD
Sbjct: 222 WSSKTETNATVLHSINKVIIHPKYD 246
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 205 GGGWIPSGYCSPRGYVHLPA 146
GG P GY +G+VHL A
Sbjct: 77 GGLEEPKGYTLFKGFVHLGA 96
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 388 SGAALLARALAPQTV 344
+GAA+ AR +AP T+
Sbjct: 1268 TGAAVYARVIAPTTI 1282
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L G+Y ++F +V L +V HHR
Sbjct: 324 LLGSYFNCIMFMVASSVVLTVLVLNFHHR 352
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L G+Y ++F +V L +V HHR
Sbjct: 324 LIGSYFNCIMFMVASSVVLTVLVLNFHHR 352
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 6.4
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +1
Query: 22 SRARTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 201
SR+ + + + DT E K +Q KEG Q+ F G L + + T+
Sbjct: 921 SRSINVKWQHKSQDTTEVTKYILQYKEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTI 980
Query: 202 HLV 210
++
Sbjct: 981 RVI 983
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 6.4
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +1
Query: 22 SRARTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 201
SR+ + + + DT E K +Q KEG Q+ F G L + + T+
Sbjct: 917 SRSINVKWQHKSQDTTEVTKYILQYKEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTI 976
Query: 202 HLV 210
++
Sbjct: 977 RVI 979
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -1
Query: 551 SDTVSRFYLKSIIHSSRERFLQARGDLFICRRL 453
++ +SR + S + R F+ R L IC L
Sbjct: 743 TNRISRIFNASKHSAKRPSFISPRSQLIICSGL 775
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,416
Number of Sequences: 438
Number of extensions: 2736
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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