Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_F22
         (480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    22   9.5  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    22   9.5  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    22   9.5  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    22   9.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   9.5  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    22   9.5  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 163 PWDLLGLFYILINQAASPV 107
           PW+++ L Y+++  A   V
Sbjct: 208 PWEMMPLMYVILKSADGDV 226


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 163 PWDLLGLFYILINQAASPV 107
           PW+++ L Y+++  A   V
Sbjct: 208 PWEMMPLMYVILKSADGDV 226


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 163 PWDLLGLFYILINQAASPV 107
           PW+++ L Y+++  A   V
Sbjct: 184 PWEMMPLMYVILKSADGDV 202


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 163 PWDLLGLFYILINQAASPV 107
           PW+++ L Y+++  A   V
Sbjct: 184 PWEMMPLMYVILKSADGDV 202


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 254 RVYGGVLCHKCVKQ 295
           ++Y GVL  KC+K+
Sbjct: 290 QIYMGVLTQKCIKE 303


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 217 FSRSSWLDTTEFALALTTP 161
           FSRS W D+  F   +T P
Sbjct: 293 FSRSIWADSIVFDSIITDP 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,932
Number of Sequences: 2352
Number of extensions: 9120
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)