Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_F22
(480 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34 pro... 91 2e-18
CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein. 86 5e-17
CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein. 86 5e-17
BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34 p... 86 5e-17
BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34 p... 86 5e-17
BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34 p... 86 5e-17
AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34 p... 86 5e-17
AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34 p... 45 1e-04
BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein. 30 3.7
BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein. 30 3.7
AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein. 30 3.7
AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein. 30 3.7
BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase... 29 8.5
BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase... 29 8.5
BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein. 29 8.5
BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein. 29 8.5
BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein. 29 8.5
BC012762-1|AAH12762.2| 338|Homo sapiens FBXO18 protein protein. 29 8.5
AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase... 29 8.5
AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase... 29 8.5
AL133069-1|CAB61392.1| 281|Homo sapiens hypothetical protein pr... 29 8.5
AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK027381-1|BAB55073.1| 455|Homo sapiens protein ( Homo sapiens ... 29 8.5
AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein. 29 8.5
AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein pr... 29 8.5
AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1 pr... 29 8.5
>L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 90.6 bits (215), Expect = 2e-18
Identities = 47/79 (59%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = +2
Query: 119 RLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 292
R+VY Y KK K P+ CG C KLRG++P RP RL KK V R YGG +C KCV+
Sbjct: 29 RIVYLYTKKVGKAPKSACGVCPGKLRGVRPVRPKVLMRLSKTKKHVSRAYGGSMCAKCVR 88
Query: 293 QRIVRAFLIEEQK-IVKVL 346
RI RAFLIEEQK IVKVL
Sbjct: 89 DRIKRAFLIEEQKIIVKVL 107
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 162
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 86.2 bits (204), Expect = 5e-17
Identities = 45/79 (56%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +2
Query: 119 RLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 292
R+VY Y KK K P+ CG C +LRG++ RP RL KK V R YGG +C KCV+
Sbjct: 29 RIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVR 88
Query: 293 QRIVRAFLIEEQKI-VKVL 346
RI RAFLIEEQKI VKVL
Sbjct: 89 DRIKRAFLIEEQKIVVKVL 107
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 162
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 86.2 bits (204), Expect = 5e-17
Identities = 45/79 (56%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +2
Query: 119 RLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 292
R+VY Y KK K P+ CG C +LRG++ RP RL KK V R YGG +C KCV+
Sbjct: 29 RIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVR 88
Query: 293 QRIVRAFLIEEQKI-VKVL 346
RI RAFLIEEQKI VKVL
Sbjct: 89 DRIKRAFLIEEQKIVVKVL 107
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 162
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 86.2 bits (204), Expect = 5e-17
Identities = 45/79 (56%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +2
Query: 119 RLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 292
R+VY Y KK K P+ CG C +LRG++ RP RL KK V R YGG +C KCV+
Sbjct: 29 RIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVR 88
Query: 293 QRIVRAFLIEEQKI-VKVL 346
RI RAFLIEEQKI VKVL
Sbjct: 89 DRIKRAFLIEEQKIVVKVL 107
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 162
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 86.2 bits (204), Expect = 5e-17
Identities = 45/79 (56%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +2
Query: 119 RLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 292
R+VY Y KK K P+ CG C +LRG++ RP RL KK V R YGG +C KCV+
Sbjct: 29 RIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVR 88
Query: 293 QRIVRAFLIEEQKI-VKVL 346
RI RAFLIEEQKI VKVL
Sbjct: 89 DRIKRAFLIEEQKIVVKVL 107
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 162
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 86.2 bits (204), Expect = 5e-17
Identities = 45/79 (56%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +2
Query: 119 RLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 292
R+VY Y KK K P+ CG C +LRG++ RP RL KK V R YGG +C KCV+
Sbjct: 29 RIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVR 88
Query: 293 QRIVRAFLIEEQKI-VKVL 346
RI RAFLIEEQKI VKVL
Sbjct: 89 DRIKRAFLIEEQKIVVKVL 107
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 162
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 86.2 bits (204), Expect = 5e-17
Identities = 45/79 (56%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +2
Query: 119 RLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 292
R+VY Y KK K P+ CG C +LRG++ RP RL KK V R YGG +C KCV+
Sbjct: 29 RIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVR 88
Query: 293 QRIVRAFLIEEQKI-VKVL 346
RI RAFLIEEQKI VKVL
Sbjct: 89 DRIKRAFLIEEQKIVVKVL 107
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 34 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 162
MVQRLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34
protein.
Length = 45
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +1
Query: 43 RLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCKKAQEDPK 162
RLT+RRRLSYNT SN+ R+ RTPG + KK + PK
Sbjct: 1 RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 40
>BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein.
Length = 349
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 390 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 262
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein.
Length = 580
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 390 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 262
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein.
Length = 349
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 390 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 262
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein.
Length = 722
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 390 FVAFFADLVLACCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 262
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein.
Length = 969
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 886 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 942
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 943 PEQVRAM 949
>BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein.
Length = 978
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 895 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 951
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 952 PEQVRAM 958
>BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein.
Length = 908
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 825 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 881
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 882 PEQVRAM 888
>BC012762-1|AAH12762.2| 338|Homo sapiens FBXO18 protein protein.
Length = 338
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 255 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 311
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 312 PEQVRAM 318
>AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1094
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 1011 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1067
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 1068 PEQVRAM 1074
>AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>AL133069-1|CAB61392.1| 281|Homo sapiens hypothetical protein
protein.
Length = 281
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 198 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 254
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 255 PEQVRAM 261
>AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens cDNA
FLJ38024 fis, clone CTONG2012996, highly similar to Mus
musculus F-box protein FBX18 mRNA. ).
Length = 1043
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens
cDNA FLJ14590 fis, clone NT2RM4001880, weakly similar to
PUTATIVE DNA HELICASE II HOMOLOG (EC 3.6.1.-). ).
Length = 779
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 696 VVRCCVGQCNNAIP-VDTVLTMKKLLITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 752
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 753 PEQVRAM 759
>AK027381-1|BAB55073.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ14475 fis, clone MAMMA1001259, highly similar to
Mus musculus F-box protein FBX18 mRNA. ).
Length = 455
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 372 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 428
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 429 PEQVRAM 435
>AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein.
Length = 1043
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein
protein.
Length = 1042
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 959 VVRCCVGQCNNAIP-VDTVLTMKKLLITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1015
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 1016 PEQVRAM 1022
>AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1
protein.
Length = 969
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 325
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 886 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 942
Query: 326 QKIVKVL 346
+ V+ +
Sbjct: 943 PEQVRAM 949
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,799,581
Number of Sequences: 237096
Number of extensions: 1355299
Number of successful extensions: 7361
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7353
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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