Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_F22
(480 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 0.97
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 0.97
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 0.97
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 1.3
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 23 2.2
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 23 2.2
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 23 2.2
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 22 3.9
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 3.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 5.2
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 9.1
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 9.1
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.8 bits (49), Expect = 0.97
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 160 WDLLGLFYILINQAASPVSLLFFFD 86
WDL L ++ N PV++ FF D
Sbjct: 91 WDLCMLLLLVANLIILPVAISFFND 115
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.8 bits (49), Expect = 0.97
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 160 WDLLGLFYILINQAASPVSLLFFFD 86
WDL L ++ N PV++ FF D
Sbjct: 91 WDLCMLLLLVANLIILPVAISFFND 115
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.8 bits (49), Expect = 0.97
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 160 WDLLGLFYILINQAASPVSLLFFFD 86
WDL L ++ N PV++ FF D
Sbjct: 91 WDLCMLLLLVANLIILPVAISFFND 115
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.4 bits (48), Expect = 1.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 70 YNTKSNQRRIVRTPGW 117
Y KSN+++I ++ GW
Sbjct: 204 YTDKSNEKKIPKSSGW 219
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -3
Query: 172 LTTPWDLLGLFYILINQAASPVSL 101
+TTPWD +++ L+ + + ++L
Sbjct: 168 ITTPWDYYYIYHTLVAEQSYGLTL 191
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -3
Query: 172 LTTPWDLLGLFYILINQAASPVSL 101
+TTPWD +++ L+ + + ++L
Sbjct: 183 ITTPWDYYYIYHTLVAEQSYGLTL 206
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 22.6 bits (46), Expect = 2.2
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -3
Query: 172 LTTPWDLLGLFYILINQAASPVSL 101
+TTPWD +++ L+ + + ++L
Sbjct: 71 ITTPWDYYYIYHTLVAEQSYGLTL 94
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.8 bits (44), Expect = 3.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 20 QKA*KWCSGLHSGDDC 67
QKA C G+ GD+C
Sbjct: 109 QKAISECKGIAKGDNC 124
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 3.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 119 RLVYQYVKKPKKI 157
RLVYQ+V PK I
Sbjct: 534 RLVYQFVDVPKDI 546
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 5.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 166 TPWDLLGLFYILINQAASPVSLLFFFDLILCCTT 65
TP D LG +++ + + L F ++L C+T
Sbjct: 128 TPRDGLGWLLLMLYLLFATLPLRLSFCVVLACST 161
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 20.6 bits (41), Expect = 9.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 287 VKQRIVRAFLIEEQKIVKV 343
+ + I+R FLI +QK K+
Sbjct: 73 ITRYIIRMFLISQQKTSKL 91
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 20.6 bits (41), Expect = 9.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 287 VKQRIVRAFLIEEQKIVKV 343
+ + I+R FLI +QK K+
Sbjct: 56 ITRYIIRMFLISQQKTSKL 74
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,474
Number of Sequences: 438
Number of extensions: 2352
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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