Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_F16
(639 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 219 3e-57
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 219 3e-57
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 219 3e-57
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 219 3e-57
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 219 3e-57
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 51 2e-06
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 51 2e-06
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 38 0.015
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 38 0.015
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 38 0.015
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot... 30 2.3
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro... 30 2.3
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot... 30 2.3
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P... 30 2.3
M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degene... 29 4.0
BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p pro... 29 4.0
AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA... 29 4.0
AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD... 29 4.0
AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC... 29 4.0
AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB... 29 4.0
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 219 bits (535), Expect = 3e-57
Identities = 104/156 (66%), Positives = 117/156 (75%)
Frame = +1
Query: 172 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 351
+VN LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QT
Sbjct: 32 VVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQT 91
Query: 352 LDKTTAKGLFKILEKYRPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 531
LDKTTA LFK+LEKYRP +P+ + +GTNTVTKL
Sbjct: 92 LDKTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKL 151
Query: 532 VXXXXAQLVVIAHDVDPIELVLFLPALCRKMGVPYC 639
+ AQLVVIAHDVDP+ELVLFLPALCRKMGVPYC
Sbjct: 152 IEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYC 187
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 219 bits (535), Expect = 3e-57
Identities = 104/156 (66%), Positives = 117/156 (75%)
Frame = +1
Query: 172 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 351
+VN LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QT
Sbjct: 32 VVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQT 91
Query: 352 LDKTTAKGLFKILEKYRPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 531
LDKTTA LFK+LEKYRP +P+ + +GTNTVTKL
Sbjct: 92 LDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKL 151
Query: 532 VXXXXAQLVVIAHDVDPIELVLFLPALCRKMGVPYC 639
+ AQLVVIAHDVDP+ELVLFLPALCRKMGVPYC
Sbjct: 152 IEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYC 187
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 219 bits (535), Expect = 3e-57
Identities = 104/156 (66%), Positives = 117/156 (75%)
Frame = +1
Query: 172 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 351
+VN LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QT
Sbjct: 32 VVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQT 91
Query: 352 LDKTTAKGLFKILEKYRPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 531
LDKTTA LFK+LEKYRP +P+ + +GTNTVTKL
Sbjct: 92 LDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKL 151
Query: 532 VXXXXAQLVVIAHDVDPIELVLFLPALCRKMGVPYC 639
+ AQLVVIAHDVDP+ELVLFLPALCRKMGVPYC
Sbjct: 152 IEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYC 187
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 219 bits (535), Expect = 3e-57
Identities = 104/156 (66%), Positives = 117/156 (75%)
Frame = +1
Query: 172 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 351
+VN LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QT
Sbjct: 32 VVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQT 91
Query: 352 LDKTTAKGLFKILEKYRPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 531
LDKTTA LFK+LEKYRP +P+ + +GTNTVTKL
Sbjct: 92 LDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKL 151
Query: 532 VXXXXAQLVVIAHDVDPIELVLFLPALCRKMGVPYC 639
+ AQLVVIAHDVDP+ELVLFLPALCRKMGVPYC
Sbjct: 152 IEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYC 187
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 219 bits (535), Expect = 3e-57
Identities = 104/156 (66%), Positives = 117/156 (75%)
Frame = +1
Query: 172 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 351
+VN LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QT
Sbjct: 32 VVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQT 91
Query: 352 LDKTTAKGLFKILEKYRPXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 531
LDKTTA LFK+LEKYRP +P+ + +GTNTVTKL
Sbjct: 92 LDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKL 151
Query: 532 VXXXXAQLVVIAHDVDPIELVLFLPALCRKMGVPYC 639
+ AQLVVIAHDVDP+ELVLFLPALCRKMGVPYC
Sbjct: 152 IEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYC 187
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 50.8 bits (116), Expect = 2e-06
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +1
Query: 493 NTIRSGTNTVTKLVXXXXAQLVVIAHDVDPIELVLFLPALCRKMGVPY 636
N +R G N TK + A +VV+A D +PIE++L LP LC VPY
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPY 79
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 50.8 bits (116), Expect = 2e-06
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +1
Query: 493 NTIRSGTNTVTKLVXXXXAQLVVIAHDVDPIELVLFLPALCRKMGVPY 636
N +R G N TK + A +VV+A D +PIE++L LP LC VPY
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPY 79
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 37.5 bits (83), Expect = 0.015
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 499 IRSGTNTVTKLVXXXXAQLVVIAHDVDPIELVLFLPALCRKMGVPY 636
+R+G V + + + A DV P++++ LPA+C + G+PY
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 37.5 bits (83), Expect = 0.015
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 499 IRSGTNTVTKLVXXXXAQLVVIAHDVDPIELVLFLPALCRKMGVPY 636
+R+G V + + + A DV P++++ LPA+C + G+PY
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 37.5 bits (83), Expect = 0.015
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 499 IRSGTNTVTKLVXXXXAQLVVIAHDVDPIELVLFLPALCRKMGVPY 636
+R+G V + + + A DV P++++ LPA+C + G+PY
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234
protein.
Length = 1228
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 381 EKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 235
+KA C+ +CL ++ +R+G QT + LL L + + L Y++ Q+P+
Sbjct: 256 DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 303
>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p
protein.
Length = 1241
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 381 EKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 235
+KA C+ +CL ++ +R+G QT + LL L + + L Y++ Q+P+
Sbjct: 263 DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 310
>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21
protein.
Length = 1241
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 381 EKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 235
+KA C+ +CL ++ +R+G QT + LL L + + L Y++ Q+P+
Sbjct: 263 DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 310
>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
protein.
Length = 1241
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 381 EKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 235
+KA C+ +CL ++ +R+G QT + LL L + + L Y++ Q+P+
Sbjct: 263 DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 310
>M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal
degeneration C protein protein.
Length = 661
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 487 RPNTIRSGTNTVTKLVXXXXAQLVVIAHDVDPIE 588
RP+ ++ T+ VT L +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p
protein.
Length = 603
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 487 RPNTIRSGTNTVTKLVXXXXAQLVVIAHDVDPIE 588
RP+ ++ T+ VT L +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA,
isoform A protein.
Length = 603
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 487 RPNTIRSGTNTVTKLVXXXXAQLVVIAHDVDPIE 588
RP+ ++ T+ VT L +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD,
isoform D protein.
Length = 661
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 487 RPNTIRSGTNTVTKLVXXXXAQLVVIAHDVDPIE 588
RP+ ++ T+ VT L +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC,
isoform C protein.
Length = 661
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 487 RPNTIRSGTNTVTKLVXXXXAQLVVIAHDVDPIE 588
RP+ ++ T+ VT L +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB,
isoform B protein.
Length = 661
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 487 RPNTIRSGTNTVTKLVXXXXAQLVVIAHDVDPIE 588
RP+ ++ T+ VT L +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,478,880
Number of Sequences: 53049
Number of extensions: 508366
Number of successful extensions: 1661
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1656
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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