Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_F15
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113500-1|AAM29505.1|  441|Drosophila melanogaster RE56208p pro...    33   0.40 
AE014297-4477|AAS65229.1|  441|Drosophila melanogaster CG31038-P...    33   0.40 
EF078695-1|ABK63801.1|  786|Drosophila melanogaster Yurt delta p...    29   3.8  
EF078694-1|ABK63800.1|  932|Drosophila melanogaster Yurt gamma p...    29   3.8  
BT015265-1|AAT94494.1|  972|Drosophila melanogaster LD33734p pro...    29   3.8  
AY061133-1|AAL28681.1|  729|Drosophila melanogaster LD11531p pro...    29   3.8  
AE014297-1692|AAF54951.1|  972|Drosophila melanogaster CG9764-PA...    29   3.8  

>AY113500-1|AAM29505.1|  441|Drosophila melanogaster RE56208p
           protein.
          Length = 441

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 14/59 (23%), Positives = 31/59 (52%)
 Frame = +2

Query: 167 PNKRHLRELLIYIFNLKKSAAEAHRLLVEAYNEAALSERTCREWFQKFKNGDFNVXDKD 343
           P+   L++ +++ F  +   A+       A+     S +   +W+Q+F++G FN+ +KD
Sbjct: 45  PSAVELQQCILFGFRRRLHPAQIFEECRNAFGPFCPSAQYVAKWYQRFQDGFFNLDEKD 103


>AE014297-4477|AAS65229.1|  441|Drosophila melanogaster CG31038-PC,
           isoform C protein.
          Length = 441

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 14/59 (23%), Positives = 31/59 (52%)
 Frame = +2

Query: 167 PNKRHLRELLIYIFNLKKSAAEAHRLLVEAYNEAALSERTCREWFQKFKNGDFNVXDKD 343
           P+   L++ +++ F  +   A+       A+     S +   +W+Q+F++G FN+ +KD
Sbjct: 45  PSAVELQQCILFGFRRRLHPAQIFEECRNAFGPFCPSAQYVAKWYQRFQDGFFNLDEKD 103


>EF078695-1|ABK63801.1|  786|Drosophila melanogaster Yurt delta
           protein.
          Length = 786

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 134 IFFYPKMSKFEPNKRHLRELLIYIFNLKKSAAEAHRLLVEAYNEAA 271
           +FF+PK+SK +  K+ L   LI I +  +   + H  +   YNE A
Sbjct: 280 LFFWPKISKLDFKKKKL--TLIVIEDDDEGREQEHTFVFRLYNEKA 323


>EF078694-1|ABK63800.1|  932|Drosophila melanogaster Yurt gamma
           protein.
          Length = 932

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 134 IFFYPKMSKFEPNKRHLRELLIYIFNLKKSAAEAHRLLVEAYNEAA 271
           +FF+PK+SK +  K+ L   LI I +  +   + H  +   YNE A
Sbjct: 280 LFFWPKISKLDFKKKKL--TLIVIEDDDEGREQEHTFVFRLYNEKA 323


>BT015265-1|AAT94494.1|  972|Drosophila melanogaster LD33734p
           protein.
          Length = 972

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 134 IFFYPKMSKFEPNKRHLRELLIYIFNLKKSAAEAHRLLVEAYNEAA 271
           +FF+PK+SK +  K+ L   LI I +  +   + H  +   YNE A
Sbjct: 280 LFFWPKISKLDFKKKKL--TLIVIEDDDEGREQEHTFVFRLYNEKA 323


>AY061133-1|AAL28681.1|  729|Drosophila melanogaster LD11531p
           protein.
          Length = 729

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 134 IFFYPKMSKFEPNKRHLRELLIYIFNLKKSAAEAHRLLVEAYNEAA 271
           +FF+PK+SK +  K+ L   LI I +  +   + H  +   YNE A
Sbjct: 37  LFFWPKISKLDFKKKKL--TLIVIEDDDEGREQEHTFVFRLYNEKA 80


>AE014297-1692|AAF54951.1|  972|Drosophila melanogaster CG9764-PA
           protein.
          Length = 972

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 134 IFFYPKMSKFEPNKRHLRELLIYIFNLKKSAAEAHRLLVEAYNEAA 271
           +FF+PK+SK +  K+ L   LI I +  +   + H  +   YNE A
Sbjct: 280 LFFWPKISKLDFKKKKL--TLIVIEDDDEGREQEHTFVFRLYNEKA 323


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,118,895
Number of Sequences: 53049
Number of extensions: 401841
Number of successful extensions: 918
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)