Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_F09
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p pro...   328   3e-90
AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA...   328   3e-90
U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal prot...   319   2e-87
BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p pro...   233   2e-61
AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p pro...    28   8.4  
AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-P...    28   8.4  

>AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p
           protein.
          Length = 184

 Score =  328 bits (807), Expect = 3e-90
 Identities = 154/171 (90%), Positives = 160/171 (93%)
 Frame = +2

Query: 86  DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 265
           D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11  DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70

Query: 266 EKIAVHCTVRGAKAXXILERGLKVXEYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 445
           EKIAVHCTVRGAKA  ILERGLKV EYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGI
Sbjct: 71  EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130

Query: 446 YGLDFYVVLGRPGFNVXHXXRKTGKVGFPHRLTKEDAMKWFQXKYDGIILN 598
           YGLDFYVVLGRPG+NV H  RK+G VGF HRLTKEDAMKWFQ KYDGIILN
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181


>AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA
           protein.
          Length = 184

 Score =  328 bits (807), Expect = 3e-90
 Identities = 154/171 (90%), Positives = 160/171 (93%)
 Frame = +2

Query: 86  DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 265
           D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11  DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70

Query: 266 EKIAVHCTVRGAKAXXILERGLKVXEYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 445
           EKIAVHCTVRGAKA  ILERGLKV EYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGI
Sbjct: 71  EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130

Query: 446 YGLDFYVVLGRPGFNVXHXXRKTGKVGFPHRLTKEDAMKWFQXKYDGIILN 598
           YGLDFYVVLGRPG+NV H  RK+G VGF HRLTKEDAMKWFQ KYDGIILN
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181


>U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal protein
           DL11 protein.
          Length = 184

 Score =  319 bits (784), Expect = 2e-87
 Identities = 150/171 (87%), Positives = 157/171 (91%)
 Frame = +2

Query: 86  DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 265
           D ++    +LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11  DPAQEPDEDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70

Query: 266 EKIAVHCTVRGAKAXXILERGLKVXEYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 445
           EKIAVHCTVRGAKA  ILERGLKV EYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGI
Sbjct: 71  EKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGI 130

Query: 446 YGLDFYVVLGRPGFNVXHXXRKTGKVGFPHRLTKEDAMKWFQXKYDGIILN 598
           YGLDFYVVLGRPG+NV H  RK+G VGF HRLTKEDAMKWFQ KYDGIILN
Sbjct: 131 YGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181


>BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p
           protein.
          Length = 163

 Score =  233 bits (569), Expect = 2e-61
 Identities = 108/123 (87%), Positives = 112/123 (91%)
 Frame = +2

Query: 230 RYTVRSFGIRRNEKIAVHCTVRGAKAXXILERGLKVXEYELRRDNFSATGNFGFGIQEHI 409
           R  VRSFGIRRNEKIAVHCTVRGAKA  ILERGLKV EYELRR+NFS+TGNFGFGIQEHI
Sbjct: 38  RRCVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHI 97

Query: 410 DLGIKYDPSIGIYGLDFYVVLGRPGFNVXHXXRKTGKVGFPHRLTKEDAMKWFQXKYDGI 589
           DLGIKYDPSIGIYGLDFYVVLGRPG+NV H  RK+G VGF HRLTKEDAMKWFQ KYDGI
Sbjct: 98  DLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGI 157

Query: 590 ILN 598
           ILN
Sbjct: 158 ILN 160


>AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p
           protein.
          Length = 2171

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 199 ELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHY 101
           ELL HLG   Q   GF  T ++  L  + +PHY
Sbjct: 626 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHY 657


>AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-PA
            protein.
          Length = 2599

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 199  ELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHY 101
            ELL HLG   Q   GF  T ++  L  + +PHY
Sbjct: 1054 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHY 1085


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,839,235
Number of Sequences: 53049
Number of extensions: 531601
Number of successful extensions: 1147
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)