Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_F06
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5VLV7 Cluster: Transposase, IS204/IS1001/IS1096/IS1165...    36   0.64 
UniRef50_A6NLZ5 Cluster: Uncharacterized protein ENSP00000371562...    36   0.64 
UniRef50_Q8N962 Cluster: CDNA FLJ38312 fis, clone FCBBF3021506; ...    36   0.85 
UniRef50_Q95Z58 Cluster: Krueppel-like protein; n=3; Plasmodium|...    35   2.0  
UniRef50_UPI0000D9AF71 Cluster: PREDICTED: hypothetical protein;...    33   4.5  
UniRef50_Q9AW87 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q4X807 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q9H9U3 Cluster: CDNA FLJ12547 fis, clone NT2RM4000634; ...    33   4.5  
UniRef50_UPI0000DC1FED Cluster: UPI0000DC1FED related cluster; n...    33   6.0  
UniRef50_Q7RGP5 Cluster: Krueppel-like protein; n=4; Plasmodium ...    33   6.0  

>UniRef50_A5VLV7 Cluster: Transposase, IS204/IS1001/IS1096/IS1165
           family protein; n=1; Lactobacillus reuteri F275|Rep:
           Transposase, IS204/IS1001/IS1096/IS1165 family protein -
           Lactobacillus reuteri F275
          Length = 296

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -1

Query: 629 KTKHLSXYF--YDNCICILVITFNVDIFTKYKHLTHNXEXXSVIFGSTIHGVXKLF 468
           K  +L  YF  YD    + V T  VD++T Y+HL H     ++I     H V + +
Sbjct: 198 KNSYLRDYFLRYDRSARLAVQTVTVDLYTPYRHLIHELFPHAIIIADHFHIVAQAY 253


>UniRef50_A6NLZ5 Cluster: Uncharacterized protein ENSP00000371562;
           n=3; Eukaryota|Rep: Uncharacterized protein
           ENSP00000371562 - Homo sapiens (Human)
          Length = 162

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +1

Query: 160 ICLVIIVFCATPLCLRVFNKTCIYIYVYVCV 252
           IC+   V+    +C+R++  TC+YIY Y+C+
Sbjct: 50  ICVYAYVYKYMCVCVRIYIHTCMYIYTYICM 80


>UniRef50_Q8N962 Cluster: CDNA FLJ38312 fis, clone FCBBF3021506;
           n=2; Homo sapiens|Rep: CDNA FLJ38312 fis, clone
           FCBBF3021506 - Homo sapiens (Human)
          Length = 134

 Score = 35.9 bits (79), Expect = 0.85
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 157 IICLVIIVFCATPLCLRVFNKTCIYIYVYVCVTFC 261
           +IC+ + VF    +C  VF   CI + +YVCV  C
Sbjct: 41  VICVCVCVFVCAHMCSCVFVYVCICVCLYVCVFVC 75


>UniRef50_Q95Z58 Cluster: Krueppel-like protein; n=3; Plasmodium|Rep:
            Krueppel-like protein - Plasmodium falciparum
          Length = 1266

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
 Frame = -1

Query: 653  IFQTITFVKTKHLSXYFYDNCICILVITFNVDIFTKYKHLTHNX--EXXSVIFGSTIHGV 480
            I++    + T  L    + N I    I +  ++  + K++T N   +   +IFG T+  +
Sbjct: 1092 IYEKKFSIHTLTLCLDLFINSILYPYIFYIHELNVQNKNMTENNIYQKVLIIFGQTLREI 1151

Query: 479  XKLFLCFIFMNNYYDHWM*SV*NGFKNNKIIQKRTTDNGFLIEMIAQ 339
              +++  I+    YD+ +    N  KNN +++KR T+       +AQ
Sbjct: 1152 S-IYIFQIYNLGMYDNNLKVFVNNIKNNNMLKKRITNENMFFLDVAQ 1197


>UniRef50_UPI0000D9AF71 Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 445

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 160 ICLVIIVFCATPLCLRVFNKTCIYIYVYVCVTFC 261
           IC+ I + C T +C+ +    CIYI + +C++ C
Sbjct: 254 ICICISIIC-TCVCICICISMCIYICICICISMC 286


>UniRef50_Q9AW87 Cluster: Putative uncharacterized protein; n=1;
           Guillardia theta|Rep: Putative uncharacterized protein -
           Guillardia theta (Cryptomonas phi)
          Length = 626

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
 Frame = -1

Query: 653 IFQTITFVKTKHLSXYFYD----NCICILVITFNVDIFTKYKHLTHNXEXXSVIFGSTIH 486
           IF TI    +K  + YFY+    NC  + +ITF  D F K  +L H+     V +   I 
Sbjct: 134 IFITIELFFSK-FTKYFYNKIKINCFILNLITF-FDFFLKKNNLDHDN---LVNYKKNIK 188

Query: 485 GVXKLFLCFIF---MNNYYDHWM*SV*NGFKNNKIIQKRT 375
                 L F+F   +NN   + +  + N  +NNKI  K T
Sbjct: 189 FYLFSILIFLFRFLLNNINQNQIFDLSNSARNNKITNKNT 228


>UniRef50_Q4X807 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 104

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 160 ICLVIIVFCATPLCLRVFNKTCIYIYV--YVCVTFC 261
           +C+ I V+    +C+ V    C+Y YV  YVCV  C
Sbjct: 19  VCMYICVYVCVCVCMCVCMYVCVYAYVCMYVCVCVC 54


>UniRef50_Q9H9U3 Cluster: CDNA FLJ12547 fis, clone NT2RM4000634;
           n=2; Homo sapiens|Rep: CDNA FLJ12547 fis, clone
           NT2RM4000634 - Homo sapiens (Human)
          Length = 307

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 191 HLCVCVCLIKRAYIYTCTCV 250
           HLCVCVCL   A++  C CV
Sbjct: 126 HLCVCVCLCVGAHLCVCLCV 145


>UniRef50_UPI0000DC1FED Cluster: UPI0000DC1FED related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC1FED UniRef100 entry -
           Rattus norvegicus
          Length = 239

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 273 YSHI-TKCHTHVHVYIYARFIKHTQTQRC 190
           Y H+ T  HTHVH++ Y +   HT T  C
Sbjct: 111 YMHVHTHIHTHVHIHTYLQSCAHTHTYIC 139


>UniRef50_Q7RGP5 Cluster: Krueppel-like protein; n=4; Plasmodium
            (Vinckeia)|Rep: Krueppel-like protein - Plasmodium yoelii
            yoelii
          Length = 1215

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = -1

Query: 566  NVDIFTKYKHLTHNXEXXSVIFGSTIHGVXKLFLCFIFMNNYYDHWM*SV*NGFKNNKII 387
            NV+I    K L H  +   ++FG T+  +  +++  I+    YD+ + +  N  KNNK++
Sbjct: 1065 NVNIQMNDKSLLH--QKVILLFGETLREIS-IYIFQIYNLGVYDNNLTTFINNIKNNKML 1121

Query: 386  -QKRTTDNGFLIEM 348
             +K T +N F +++
Sbjct: 1122 IRKATNENMFFMDV 1135


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,876,650
Number of Sequences: 1657284
Number of extensions: 10294948
Number of successful extensions: 23219
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22453
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)