Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_F05
(470 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal prot... 168 4e-42
L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal prot... 168 4e-42
BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p pro... 168 4e-42
AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p pro... 168 4e-42
AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA... 168 4e-42
M77166-1|AAA28528.1| 873|Drosophila melanogaster fasciclin II p... 28 5.5
M77165-1|AAA28527.1| 811|Drosophila melanogaster fasciclin II p... 28 5.5
BT014661-1|AAT27285.1| 773|Drosophila melanogaster GH15080p pro... 28 5.5
AL033125-2|CAA21826.1| 850|Drosophila melanogaster EG:EG0007.3,... 28 5.5
AL033125-1|CAA21825.1| 788|Drosophila melanogaster EG:EG0007.3,... 28 5.5
AE014298-607|AAN09119.1| 811|Drosophila melanogaster CG3665-PC,... 28 5.5
AE014298-606|AAN09118.1| 773|Drosophila melanogaster CG3665-PB,... 28 5.5
AE014298-605|AAF45925.2| 873|Drosophila melanogaster CG3665-PA,... 28 5.5
BT010033-1|AAQ22502.1| 1180|Drosophila melanogaster LP05937p pro... 27 9.7
AY089510-1|AAL90248.1| 697|Drosophila melanogaster GH20325p pro... 27 9.7
AE014297-1132|AAS65135.1| 1180|Drosophila melanogaster CG11870-P... 27 9.7
AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-P... 27 9.7
AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-P... 27 9.7
AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-P... 27 9.7
AE013599-1631|AAF58428.1| 697|Drosophila melanogaster CG13325-P... 27 9.7
>X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal protein
S3 protein.
Length = 246
Score = 168 bits (408), Expect = 4e-42
Identities = 77/103 (74%), Positives = 88/103 (85%)
Frame = +2
Query: 41 FIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVLGI 220
+IMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLL QGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 221 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 349
KVK+MLP+D + K GPKKP PD++ V EPK+E + P +E +
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 4 LAVRRACYGVLRF 42
LAVRRACYGVLR+
Sbjct: 115 LAVRRACYGVLRY 127
>L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal protein
S3/AP endonucleaseDNA repair protein protein.
Length = 246
Score = 168 bits (408), Expect = 4e-42
Identities = 77/103 (74%), Positives = 88/103 (85%)
Frame = +2
Query: 41 FIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVLGI 220
+IMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLL QGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 221 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 349
KVK+MLP+D + K GPKKP PD++ V EPK+E + P +E +
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 4 LAVRRACYGVLRF 42
LAVRRACYGVLR+
Sbjct: 115 LAVRRACYGVLRY 127
>BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p
protein.
Length = 253
Score = 168 bits (408), Expect = 4e-42
Identities = 77/103 (74%), Positives = 88/103 (85%)
Frame = +2
Query: 41 FIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVLGI 220
+IMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLL QGVLGI
Sbjct: 134 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 193
Query: 221 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 349
KVK+MLP+D + K GPKKP PD++ V EPK+E + P +E +
Sbjct: 194 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 236
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 4 LAVRRACYGVLRF 42
LAVRRACYGVLR+
Sbjct: 122 LAVRRACYGVLRY 134
>AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p
protein.
Length = 246
Score = 168 bits (408), Expect = 4e-42
Identities = 77/103 (74%), Positives = 88/103 (85%)
Frame = +2
Query: 41 FIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVLGI 220
+IMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLL QGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 221 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 349
KVK+MLP+D + K GPKKP PD++ V EPK+E + P +E +
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 4 LAVRRACYGVLRF 42
LAVRRACYGVLR+
Sbjct: 115 LAVRRACYGVLRY 127
>AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA
protein.
Length = 246
Score = 168 bits (408), Expect = 4e-42
Identities = 77/103 (74%), Positives = 88/103 (85%)
Frame = +2
Query: 41 FIMESGARGCEVVVSGKLRGQRAKSMKFVXGLMIHSGDPCNDYVNTATRHVLLXQGVLGI 220
+IMESGA+GCEVVVSGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLL QGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 221 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 349
KVK+MLP+D + K GPKKP PD++ V EPK+E + P +E +
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYK 229
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 4 LAVRRACYGVLRF 42
LAVRRACYGVLR+
Sbjct: 115 LAVRRACYGVLRY 127
>M77166-1|AAA28528.1| 873|Drosophila melanogaster fasciclin II
protein.
Length = 873
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 257 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 343
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>M77165-1|AAA28527.1| 811|Drosophila melanogaster fasciclin II
protein.
Length = 811
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 257 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 343
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>BT014661-1|AAT27285.1| 773|Drosophila melanogaster GH15080p
protein.
Length = 773
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 257 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 343
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>AL033125-2|CAA21826.1| 850|Drosophila melanogaster
EG:EG0007.3,FBgn0000635;Fas2 protein.
Length = 850
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 257 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 343
++ P++P+P H V K+EPV + P S+
Sbjct: 599 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 627
>AL033125-1|CAA21825.1| 788|Drosophila melanogaster
EG:EG0007.3,FBgn0000635;Fas2 protein.
Length = 788
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 257 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 343
++ P++P+P H V K+EPV + P S+
Sbjct: 599 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 627
>AE014298-607|AAN09119.1| 811|Drosophila melanogaster CG3665-PC,
isoform C protein.
Length = 811
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 257 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 343
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>AE014298-606|AAN09118.1| 773|Drosophila melanogaster CG3665-PB,
isoform B protein.
Length = 773
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 257 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 343
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>AE014298-605|AAF45925.2| 873|Drosophila melanogaster CG3665-PA,
isoform A protein.
Length = 873
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 257 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 343
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>BT010033-1|AAQ22502.1| 1180|Drosophila melanogaster LP05937p
protein.
Length = 1180
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 318 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 217
GS L + + G + GP + CWS G ++ TL+
Sbjct: 229 GSPLYASPEIVEGTPYQGPEVDCWSLGVLLYTLV 262
>AY089510-1|AAL90248.1| 697|Drosophila melanogaster GH20325p
protein.
Length = 697
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 188 HVLLXQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTS 340
H+L+ + G+ + + P +GK P + Q HI EP+D LEPT+
Sbjct: 647 HLLIEAPIGGLDI-FLRP---KGKISPTEKQTSHIDDKEPRDPENLLEPTT 693
>AE014297-1132|AAS65135.1| 1180|Drosophila melanogaster CG11870-PD,
isoform D protein.
Length = 1180
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 318 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 217
GS L + + G + GP + CWS G ++ TL+
Sbjct: 229 GSPLYASPEIVEGTPYQGPEVDCWSLGVLLYTLV 262
>AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-PC,
isoform C protein.
Length = 1427
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 318 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 217
GS L + + G + GP + CWS G ++ TL+
Sbjct: 229 GSPLYASPEIVEGTPYQGPEVDCWSLGVLLYTLV 262
>AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-PB,
isoform B protein.
Length = 1427
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 318 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 217
GS L + + G + GP + CWS G ++ TL+
Sbjct: 229 GSPLYASPEIVEGTPYQGPEVDCWSLGVLLYTLV 262
>AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-PA,
isoform A protein.
Length = 1427
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 318 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 217
GS L + + G + GP + CWS G ++ TL+
Sbjct: 229 GSPLYASPEIVEGTPYQGPEVDCWSLGVLLYTLV 262
>AE013599-1631|AAF58428.1| 697|Drosophila melanogaster CG13325-PA
protein.
Length = 697
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 188 HVLLXQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTS 340
H+L+ + G+ + + P +GK P + Q HI EP+D LEPT+
Sbjct: 647 HLLIEAPIGGLDI-FLRP---KGKISPTEKQTSHIDDKEPRDPENLLEPTT 693
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,664,475
Number of Sequences: 53049
Number of extensions: 336299
Number of successful extensions: 1439
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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