Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_F01
         (408 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   1.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   5.7  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    22   7.5  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       22   9.9  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +2

Query: 50  VVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTH--VIN 223
           +VT+++  +  G+D+LA  +EDV + L        E       T +++RR DGT    + 
Sbjct: 202 IVTEMAEVLITGIDMLA-KKEDVERGL----QRALERTAVAATTSLWERR-DGTQRARVR 255

Query: 224 LRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLK 340
           L R    L+L  R VV       V ++ S P  Q++ ++
Sbjct: 256 LPRRDTDLLLDKRIVVG----HSVCLVRSAPKQQQSAVR 290


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 291 MCSSSHHGPSVSVLY*SLPRTPVL-RLLRGVSHQ 389
           M  +SHH  +   LY SLP  P L  +L G+  Q
Sbjct: 402 MLRASHHSAAGHPLYPSLPYPPNLYGMLPGMGMQ 435


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +1

Query: 295 VRHLITALRSACCTEVCRAHRCYAYCGAFHTRCFY 399
           V+HL          E  RA  CY    AFH +  Y
Sbjct: 287 VQHLALHAFHNTENEAMRAESCYQLARAFHVQRDY 321


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 118 HQNACCNHPSWGRKC 162
           H NA C  P +G  C
Sbjct: 398 HPNATCGRPEFGDYC 412


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,567
Number of Sequences: 2352
Number of extensions: 10790
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)