Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_F01
(408 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 161 1e-40
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.015
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.015
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 27 3.9
U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical pr... 27 3.9
AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cel... 27 3.9
AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein. 27 3.9
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 5.2
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 5.2
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 5.2
AL110482-8|CAE17990.1| 193|Caenorhabditis elegans Hypothetical ... 27 6.9
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 6.9
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 6.9
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 6.9
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 6.9
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 26 9.1
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 26 9.1
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 161 bits (392), Expect = 1e-40
Identities = 73/110 (66%), Positives = 90/110 (81%)
Frame = +2
Query: 74 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 253
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 254 AARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTN 403
AARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TN
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTN 110
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.011
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 253 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 375
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.015
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 253 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 375
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.015
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 253 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 375
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.015
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 253 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 375
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.015
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 253 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 375
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 250 SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYC 372
S SCC S C+ + +S+C T +C+ +C C
Sbjct: 38 SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQC 77
>U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical
protein F38B6.7 protein.
Length = 391
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 14 SISPPSWHYTRLVVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYK 193
++S P ++ T+L + + GG+D + LNE TK A T + + +F M Y ++
Sbjct: 193 NLSMPIFYVTQLSPSIVPNAPKGGIDYVVLNEYIPTKNKANTPEIRTGD-HFAMLPYRFR 251
>AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cell
migration protein 30 protein.
Length = 787
Score = 27.5 bits (58), Expect = 3.9
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 44 RLVVTQISATMSGGLDVLALNEED-VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVI 220
R+V T+ +L ++ D T LAA L ++++ +E Y+ KR TH+I
Sbjct: 144 RIVATRSELEFQNCSTLLDISRSDWATNQLAAIALLQGKDISQLLELYLEKRFEHVTHLI 203
Query: 221 NLRRTWEKLVLAARAVVAI 277
T +V + +A+
Sbjct: 204 EDSATILNIVDEMKKTLAV 222
>AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein.
Length = 787
Score = 27.5 bits (58), Expect = 3.9
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 44 RLVVTQISATMSGGLDVLALNEED-VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVI 220
R+V T+ +L ++ D T LAA L ++++ +E Y+ KR TH+I
Sbjct: 144 RIVATRSELEFQNCSTLLDISRSDWATNQLAAIALLQGKDISQLLELYLEKRFEHVTHLI 203
Query: 221 NLRRTWEKLVLAARAVVAI 277
T +V + +A+
Sbjct: 204 EDSATILNIVDEMKKTLAV 222
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 133 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVR 300
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDR 509
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 133 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVR 300
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDR 509
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 133 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVR 300
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDR 509
>AL110482-8|CAE17990.1| 193|Caenorhabditis elegans Hypothetical
protein Y39G8B.10 protein.
Length = 193
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 205 WYPCDQLASYLGKTCSGCS 261
WY C Y KTC CS
Sbjct: 156 WYKCSDRIKYCPKTCGYCS 174
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 193 TTC*WYPCDQLASYLGKTCSGCS 261
T C +Y C+Q Y KTC C+
Sbjct: 38 TNC-FYTCEQREQYCAKTCEYCA 59
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = +1
Query: 214 CDQLASYLGKTC---SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGAFH 384
C + AS G TC +G C + E C R C +VCR Y C A
Sbjct: 732 CPKCAS--GSTCDHINGLCICPAGLEGALCTRPCSAGFWGNGCRQVCRCTSEYKQCNAQT 789
Query: 385 TRC 393
C
Sbjct: 790 GEC 792
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = +1
Query: 214 CDQLASYLGKTC---SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGAFH 384
C + AS G TC +G C + E C R C +VCR Y C A
Sbjct: 732 CPKCAS--GSTCDHINGLCICPAGLEGALCTRPCSAGFWGNGCRQVCRCTSEYKQCNAQT 789
Query: 385 TRC 393
C
Sbjct: 790 GEC 792
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = +1
Query: 214 CDQLASYLGKTC---SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGAFH 384
C + AS G TC +G C + E C R C +VCR Y C A
Sbjct: 732 CPKCAS--GSTCDHINGLCICPAGLEGALCTRPCSAGFWGNGCRQVCRCTSEYKQCNAQT 789
Query: 385 TRC 393
C
Sbjct: 790 GEC 792
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = +1
Query: 214 CDQLASYLGKTC---SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGAFH 384
C + AS G TC +G C + E C R C +VCR Y C A
Sbjct: 732 CPKCAS--GSTCDHINGLCICPAGLEGALCTRPCSAGFWGNGCRQVCRCTSEYKQCNAQT 789
Query: 385 TRC 393
C
Sbjct: 790 GEC 792
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 175 GDLCLQTTC*WYPCDQLASYLGKTCSGCSCC 267
G C +T+ Y C L+ Y G C + C
Sbjct: 409 GGTCTETSSGGYTCSCLSQYFGTNCEEINRC 439
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Frame = +1
Query: 133 CNHPSWGRKC*LPDGDLCLQTTC*W-----------YPCDQLASYLGKTCSGCSCC 267
C+ +G KC D+C TC + Y CD L Y GK C + C
Sbjct: 324 CDDGFFGDKC--QYSDICTSATCLYGGTCTELNNGDYKCDCLLQYFGKNCEVINRC 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,421,838
Number of Sequences: 27780
Number of extensions: 231824
Number of successful extensions: 580
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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