Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_E24
(478 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 155 6e-37
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 130 1e-29
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 128 6e-29
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 107 1e-22
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 101 1e-20
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 98 8e-20
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 87 1e-16
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 86 4e-16
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 84 1e-15
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 82 5e-15
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 78 9e-14
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 77 2e-13
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 72 6e-12
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 72 6e-12
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 71 1e-11
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 70 3e-11
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 67 2e-10
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 67 2e-10
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 64 2e-09
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 64 2e-09
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 62 6e-09
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 60 3e-08
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 59 4e-08
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 59 4e-08
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 58 1e-07
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 51 1e-05
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 48 8e-05
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 47 2e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 44 0.002
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 41 0.016
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 38 0.11
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 36 0.35
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 36 0.61
UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus buty... 33 2.5
UniRef50_Q2QPF1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_A6UK34 Cluster: Helix-turn-helix-domain containing prot... 32 5.7
UniRef50_A1ZKV6 Cluster: Putative uncharacterized protein; n=1; ... 32 7.5
UniRef50_Q5CZ07 Cluster: Putative uncharacterized protein; n=2; ... 31 10.0
UniRef50_Q0UBN7 Cluster: Putative uncharacterized protein; n=1; ... 31 10.0
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 155 bits (375), Expect = 6e-37
Identities = 76/106 (71%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Frame = +2
Query: 47 FEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQY 223
+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA Y
Sbjct: 5 YELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPY 63
Query: 224 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
EKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L Q+RK
Sbjct: 64 EKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 130 bits (315), Expect = 1e-29
Identities = 68/107 (63%), Positives = 80/107 (74%)
Frame = +2
Query: 41 LAFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 220
L + +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G A
Sbjct: 3 LRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAP 52
Query: 221 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREEL NVLA MRK
Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 128 bits (309), Expect = 6e-29
Identities = 60/77 (77%), Positives = 65/77 (84%)
Frame = +2
Query: 131 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIR 310
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRALKFLKRRLGTHIR
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIR 62
Query: 311 AKRKREELXNVLAQMRK 361
AKRKREEL N+L QM K
Sbjct: 63 AKRKREELSNILTQMGK 79
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 107 bits (257), Expect = 1e-22
Identities = 55/103 (53%), Positives = 72/103 (69%)
Frame = +2
Query: 53 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 232
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 233 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
+E+L++SKDKRALKFLKRR+GTH RAK KREEL NV+ RK
Sbjct: 59 VLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 101 bits (241), Expect = 1e-20
Identities = 55/100 (55%), Positives = 65/100 (65%)
Frame = +2
Query: 59 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 238
VG+ KGH TK + + RP+ KG TK FVR L+REVVG A YEKR
Sbjct: 12 VGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRIT 61
Query: 239 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMR 358
ELLKV KDKRALK KR+LGTH RAK+KREE+ V+ +MR
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 98.3 bits (234), Expect = 8e-20
Identities = 54/100 (54%), Positives = 65/100 (65%)
Frame = +2
Query: 59 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 238
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 239 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMR 358
ELLKV KDKRALK KR+LGTH RAKRKREE+ +VL +MR
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 87.4 bits (207), Expect = 1e-16
Identities = 41/75 (54%), Positives = 55/75 (73%)
Frame = +2
Query: 137 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAK 316
RP+ KGL+T+ FVR ++REV G + YEKR MELL+ SKDK+A K K+RLGT +R+K
Sbjct: 120 RPSNKKGLKTEKKTFVRSVIREVAGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSK 179
Query: 317 RKREELXNVLAQMRK 361
RK EEL V+ + R+
Sbjct: 180 RKIEELSAVIVEQRR 194
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 85.8 bits (203), Expect = 4e-16
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Frame = +2
Query: 53 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 232
IAVGL KGH TT I + +RP+R KGL+TK + V +++REV G A YE+
Sbjct: 16 IAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIREVCGFAPYERH 67
Query: 233 AMELLK---VSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
+EL+K S KRALKF K+RLGT RAK K +E+ V+ RK
Sbjct: 68 MIELIKTGSASAQKRALKFAKKRLGTLRRAKTKNDEMMRVVELQRK 113
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 84.2 bits (199), Expect = 1e-15
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +2
Query: 107 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 286
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 287 RRLGTHIRAKRKREELXNVLAQMR 358
+RLGT RAK K EEL +V+ R
Sbjct: 73 KRLGTLKRAKGKIEELTSVIQSSR 96
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 82.2 bits (194), Expect = 5e-15
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +2
Query: 161 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXN 340
Q+ + VR ++ EV G A YEKR +ELL++ KDKRALKF K+RLGTH+RAKRKRE++
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAE 87
Query: 341 VLAQMR 358
L R
Sbjct: 88 ALRSKR 93
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 78.2 bits (184), Expect = 9e-14
Identities = 48/103 (46%), Positives = 62/103 (60%)
Frame = +2
Query: 53 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 232
+A+GL KGHK K + K + P RL TKH+KFV+D++REV Y+
Sbjct: 7 MAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDFMSYDWC 56
Query: 233 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
+ L KVS DK A KF+K+R+G HI KRK EEL V+A MRK
Sbjct: 57 TVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 77.0 bits (181), Expect = 2e-13
Identities = 44/103 (42%), Positives = 64/103 (62%)
Frame = +2
Query: 53 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 232
IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G + YE+R
Sbjct: 7 IAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGLSPYERR 56
Query: 233 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
++L++ S +KRA K K+RLG+ RAK K EE+ N++A R+
Sbjct: 57 LIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 72.1 bits (169), Expect = 6e-12
Identities = 32/46 (69%), Positives = 41/46 (89%)
Frame = +2
Query: 224 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
++RAMELLKVSKDKR L+ +K+R+GTH+RAKR+ EEL NVLA +RK
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 72.1 bits (169), Expect = 6e-12
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Frame = +2
Query: 53 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 232
IAVG GH TK S +K I K++ K+ + D+VRE+ G + YEKR
Sbjct: 13 IAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSPYEKR 60
Query: 233 AMELLKVSKD---KRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
+EL+KV KR+LK+ K++LGTH R K KREE+ ++ R+
Sbjct: 61 LIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 71.3 bits (167), Expect = 1e-11
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +2
Query: 92 ISAGRKGITDKAIRIRPARLKGLQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKR 268
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 269 ALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
ALKF+++ LGTHI AKRK EL NVLA R+
Sbjct: 75 ALKFIQKMLGTHICAKRKARELSNVLATTRE 105
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 69.7 bits (163), Expect = 3e-11
Identities = 41/90 (45%), Positives = 53/90 (58%)
Frame = +2
Query: 59 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 238
VGL KGH TK K + RP+ KG +K + FVR+L+REV G YEKR
Sbjct: 12 VGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRIT 61
Query: 239 ELLKVSKDKRALKFLKRRLGTHIRAKRKRE 328
ELLKV KDKRALK + ++G H + ++ E
Sbjct: 62 ELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 67.3 bits (157), Expect = 2e-10
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = +2
Query: 164 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRKREEL 334
+K + ++D+VRE+ G + YEKR +EL+K+ + KR+LK+ K++LGTH R K KREE+
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEI 115
Query: 335 XNVLAQMRK 361
V+ R+
Sbjct: 116 QKVVILQRR 124
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 67.3 bits (157), Expect = 2e-10
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Frame = +2
Query: 53 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 232
IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + YEKR
Sbjct: 6 IAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPYEKR 58
Query: 233 AMELLKVS--KD-KRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
+EL K + KD K+A K +RLGT+ R KRK E + N+ MRK
Sbjct: 59 IIELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 63.7 bits (148), Expect = 2e-09
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +2
Query: 152 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 331
K + TK +RD++RE+ G + YE+R ELLK DKRALK K+RLG+ K+KR++
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 332 LXNV 343
+ N+
Sbjct: 95 IANI 98
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 63.7 bits (148), Expect = 2e-09
Identities = 39/103 (37%), Positives = 57/103 (55%)
Frame = +2
Query: 53 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 232
I G KG+KTT+ A R D+ L K + V+ ++ ++VG + E+R
Sbjct: 15 IIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLVGFSPMERR 64
Query: 233 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 361
ELL+V KDKRALKF K+RLG+ AK++R ++ L Q K
Sbjct: 65 VQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 62.1 bits (144), Expect = 6e-09
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +2
Query: 245 LKVSKDKRALKFLKRRLGTHIRAKRKREELXN 340
LKVSKDKRALKF+K+R+GTHIRAKRKREEL N
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 59.7 bits (138), Expect = 3e-08
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = +2
Query: 170 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 334
H +FV+ +++E G A YE +ELL+++KD+ AL++ K+RLG RAK KR++L
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQL 83
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 59.3 bits (137), Expect = 4e-08
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +2
Query: 167 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVL 346
KH + V+ ++ ++VG + EKR E L+V K+KRALK+ K+RLG AK+KR ++ L
Sbjct: 38 KHLRAVKAIIADLVGLSPLEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEAL 97
Query: 347 AQMRK 361
K
Sbjct: 98 RHATK 102
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 59.3 bits (137), Expect = 4e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +2
Query: 134 IRPARLKGLQT--KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI 307
+ P R GL + K F R +V E+VG YE+ M+L+K+ + + A +FLK+RLGTH
Sbjct: 11 LAPKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHR 70
Query: 308 RAKRKREELXNVLAQ 352
RA +K L V+ +
Sbjct: 71 RAMKKLNTLEEVVQE 85
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 58.0 bits (134), Expect = 1e-07
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +2
Query: 83 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 253
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 254 SKDKRALKFLKRRLGTHIRA 313
+DK AL+F+ +HIRA
Sbjct: 69 FQDKLALRFMSG--PSHIRA 86
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 51.2 bits (117), Expect = 1e-05
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +2
Query: 53 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 232
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 233 AMELLKV 253
MELL V
Sbjct: 60 MMELLLV 66
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 48.4 bits (110), Expect = 8e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +2
Query: 119 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 268
+K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK K+
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +2
Query: 161 QTKHSKFVRDLVR-EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELX 337
+T+ S+F+ V E+ G + EK+A+ LL+ + +A K L++RLG+H RA K E+L
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLA 101
Query: 338 NVLAQ 352
+L +
Sbjct: 102 RMLLE 106
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 43.6 bits (98), Expect = 0.002
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +2
Query: 251 VSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMR 358
V+K + L+ R+LGTH RAKRKREE+ NVL +MR
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 40.7 bits (91), Expect = 0.016
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 164 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNV 343
TK V D++RE G YE+ M+LL+ DK+AL + K+ + + E NV
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQAEMKSNV 84
Query: 344 LAQMRK 361
L + K
Sbjct: 85 LLEAIK 90
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 37.9 bits (84), Expect = 0.11
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 161 QTKHSKF-VRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELX 337
+T KF + ++ G ++EK+ +K+ +++ALK K++LG RAK+K + +
Sbjct: 9 KTNFKKFNINVVLTSTFGLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSIN 68
Query: 338 NVL 346
++L
Sbjct: 69 HIL 71
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 36.3 bits (80), Expect = 0.35
Identities = 28/94 (29%), Positives = 48/94 (51%)
Frame = +2
Query: 71 KGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 250
K KT + + G++ I D ++ + K + K+ R+LV + +AME ++
Sbjct: 50 KWTKTHRAARGKEMIVDSSLVLSQFAKK--RNTPVKYDRNLVAATI-------KAMERVE 100
Query: 251 VSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQ 352
+ +R F KRRLG + +RKREE V+A+
Sbjct: 101 EIRARRERAFTKRRLGGKLARERKREEDRRVVAE 134
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 35.5 bits (78), Expect = 0.61
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +2
Query: 167 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 334
K KFV DL + Q + + ++ LK ++DK+ +KF+ RRL IR + K+E L
Sbjct: 112 KDYKFVNDLRK------QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus
butylicus DSM 5456|Rep: Predicted Rad50 - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 887
Score = 33.5 bits (73), Expect = 2.5
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +2
Query: 143 ARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRL----GTHIR 310
ARL+ L+T+ +K + H +YE+ EL K+ + + LKRRL +
Sbjct: 532 ARLEELRTEQAKLSERRLELFEKHKEYEEARKELEKLGQAVVEYRVLKRRLEELEKRRVE 591
Query: 311 AKRKREEL 334
A+R REEL
Sbjct: 592 AERLREEL 599
>UniRef50_Q2QPF1 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 100
Score = 32.7 bits (71), Expect = 4.3
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 148 SSWPNSDGFVCD-TLAASGYFSCFVAFSQAYCDFKSEE 38
SSW N D T ++ G S F A SQAYC F +E+
Sbjct: 26 SSWLNVTAMNTDGTFSSHGVISIFSASSQAYCKFSNEK 63
>UniRef50_A6UK34 Cluster: Helix-turn-helix-domain containing protein
AraC type; n=1; Sinorhizobium medicae WSM419|Rep:
Helix-turn-helix-domain containing protein AraC type -
Sinorhizobium medicae WSM419
Length = 348
Score = 32.3 bits (70), Expect = 5.7
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2
Query: 120 SVIPLRPADILVVLWPFRRPTAISKARSHDFGLTDPKK 7
S+ +RP + W F P+A S+A H+FG+T PK+
Sbjct: 278 SIEDVRPISRIAEEWGFDDPSAFSRAFKHEFGMT-PKE 314
>UniRef50_A1ZKV6 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 292
Score = 31.9 bits (69), Expect = 7.5
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = +2
Query: 110 GITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKR 289
G D+ I+ R ++KGL TK+SK ++LV + A++ LKV K K LK ++
Sbjct: 55 GQLDRVIQERETQVKGLTTKNSKRKQELVEAI--------NALKGLKVEKQK-LLKNVQT 105
Query: 290 RLGTHIRAKRKREELXNVLAQMRK 361
H R+ +L + + ++RK
Sbjct: 106 LKREHNINLRRITDLNSKIVKLRK 129
>UniRef50_Q5CZ07 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 458
Score = 31.5 bits (68), Expect = 10.0
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 197 REVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 334
R++ + EKR E L++ K++ L+ K + +R K+++EEL
Sbjct: 85 RKIKERKEREKREQEELRLKKEQEELRLKKEKEQEELRLKKEQEEL 130
>UniRef50_Q0UBN7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 723
Score = 31.5 bits (68), Expect = 10.0
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -2
Query: 333 SSSRFLLARMCVPNRRFKNFR--ARLSFDTLSNSIALFSY 220
++S L+ R CV RF+ FR +R +FDTLS L SY
Sbjct: 489 TNSHDLIMRTCVTYLRFRPFRIDSRNTFDTLSARYPLLSY 528
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,415,340
Number of Sequences: 1657284
Number of extensions: 6446145
Number of successful extensions: 16734
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 16491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16721
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -