Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_E22
(593 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 95 7e-21
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 61 1e-10
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 52 6e-08
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 41 2e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 38 0.001
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 37 0.003
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 36 0.003
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 36 0.006
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 34 0.018
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 32 0.055
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 31 0.096
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.68
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 27 1.6
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 4.8
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 8.3
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 95.1 bits (226), Expect = 7e-21
Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 436
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 437 LLSFWRGNFANVIRYFRXKXLNFA 508
++S WRGN ANV+RYF + LNFA
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFA 110
Score = 33.5 bits (73), Expect = 0.024
Identities = 19/84 (22%), Positives = 39/84 (46%)
Frame = +2
Query: 260 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 439
FA + +GG + A S V ++ + L S + ++++ G+VD + + + GL
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191
Query: 440 LSFWRGNFANVIRYFRXKXLNFAL 511
+RG +V+ + L F +
Sbjct: 192 RGLYRGFGPSVVGIVVYRGLYFGM 215
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 61.3 bits (142), Expect = 1e-10
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +2
Query: 275 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 454
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+R
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77
Query: 455 GNFANVIRYFRXKXLNFA 508
GN N +R F + FA
Sbjct: 78 GNGTNCLRAFPYGAVQFA 95
Score = 39.5 bits (88), Expect = 4e-04
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +2
Query: 230 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 409
K + AD AF K FL GG + + +T P + ++ QV + YK I A
Sbjct: 217 KFFSNADLTAFQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSA 272
Query: 410 FVRIPKEQGLLSFWRGNFANVIR 478
I K +G+ F+RG +N+++
Sbjct: 273 IFHIYKTEGINGFFRGYSSNMLK 295
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 52.0 bits (119), Expect = 6e-08
Identities = 30/87 (34%), Positives = 46/87 (52%)
Frame = +2
Query: 266 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 445
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 446 FWRGNFANVIRYFRXKXLNFALXGQVQ 526
++G+ A + R F + F QV+
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVR 104
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 40.7 bits (91), Expect = 2e-04
Identities = 22/86 (25%), Positives = 43/86 (50%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
DP F++GGI+ VS+T AP++R+K++L + + + + ++ +
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWN 181
Query: 428 EQGLLSFWRGNFANVIRYFRXKXLNF 505
G+ SF+ GN NV++ + F
Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKF 207
Score = 35.9 bits (79), Expect = 0.004
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 281 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 460
G +S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 461 FANVIR 478
N+++
Sbjct: 399 SPNLLK 404
Score = 31.1 bits (67), Expect = 0.13
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 272 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSF 448
+LAGG++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287
Query: 449 WRGNFANVIRYF 484
+RG ++ F
Sbjct: 288 YRGVLVGILGMF 299
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 37.9 bits (84), Expect = 0.001
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 257 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 433
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 434 GLLSFWRG 457
GL +F++G
Sbjct: 70 GLAAFYKG 77
Score = 34.7 bits (76), Expect = 0.010
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 251 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 430
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 431 QGLLSFWRG 457
GL +G
Sbjct: 164 YGLSGIMKG 172
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 272 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 448
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGL 86
Query: 449 WRG 457
RG
Sbjct: 87 QRG 89
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 36.3 bits (80), Expect = 0.003
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +2
Query: 275 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 454
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 455 G 457
G
Sbjct: 268 G 268
Score = 34.3 bits (75), Expect = 0.014
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 275 LAGGISAAVSKTAVAPIERVKLLLQVQH-VSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 451
LAG S + + + P++ +K +Q+ + VS+ ++ + IV++ ++I +G+ S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 452 RG 457
RG
Sbjct: 79 RG 80
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 35.5 bits (78), Expect = 0.006
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +2
Query: 272 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 451
FL G ++ ++ PI+ VK +Q ++A + YK + +I + GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFW 260
Query: 452 RGNFANVIRYFRXKXLNFALXGQV 523
G + R + F + +V
Sbjct: 261 SGATPRLARLILSGGIVFTVYEKV 284
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 33.9 bits (74), Expect = 0.018
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 263 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGL 439
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++ +
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERI 157
Query: 440 LSFWRGNFANVIRY 481
L+ + G A + R+
Sbjct: 158 LALYNGFEATMWRH 171
Score = 29.5 bits (63), Expect = 0.39
Identities = 22/87 (25%), Positives = 36/87 (41%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
D + F F AG ++ + P++ VK +Q+ V K Y G D +I K
Sbjct: 4 DNIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVK 57
Query: 428 EQGLLSFWRGNFANVIRYFRXKXLNFA 508
+G +RG ++ + L FA
Sbjct: 58 NEGPHRLYRGILPPILMEAPKRALKFA 84
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 32.3 bits (70), Expect = 0.055
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 275 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 454
LAGGIS+ + + +AP + +K+ +Q+ S + F +++G+ + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 455 GNFANVIRY 481
GN + Y
Sbjct: 70 GNVVAELLY 78
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +2
Query: 275 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 454
L+G I+ A SK + P++ V LQ YK D F+ I + G+ +R
Sbjct: 197 LSGVIAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYR 248
Query: 455 GNFANVIR 478
G ++++
Sbjct: 249 GLSVSMLK 256
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 31.5 bits (68), Expect = 0.096
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Frame = +2
Query: 209 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS----KQIA 376
V +T +N SN P + F+AGG++ + A AP++ VK LQ KQ A
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTA 90
Query: 377 ADQ-----RYKGIVDAFV---RIPKEQGLLSFWRGNFANVIRYFRXKXLNFALXG 517
+ Y+ +D + + +G + +RG N+I + +NF G
Sbjct: 91 KSKSPLTAAYRHFMDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINFFSYG 145
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +2
Query: 284 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 463
GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ + G
Sbjct: 280 GIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLT 336
Query: 464 ANVIR 478
A+++R
Sbjct: 337 AHLLR 341
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 28.7 bits (61), Expect = 0.68
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 374 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 472
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 266 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 355
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 27.5 bits (58), Expect = 1.6
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Frame = +2
Query: 266 KDFLAGGISAAVSKT--AVAPIERVKLLLQVQHVSK-QIAADQRYKGIVDAFVRIPKEQG 436
KD L GG + V K P + +QV K + A K + D + G
Sbjct: 167 KDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSG 226
Query: 437 LLSFWRGNFANVIRYFR 487
+ FW G F + + F+
Sbjct: 227 AVKFWNGKFFTLSQSFK 243
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 414 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 307
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 8.3
Identities = 19/84 (22%), Positives = 33/84 (39%)
Frame = +2
Query: 230 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 409
K L P + L G ++ + +A+ P++ +K QV Y G +
Sbjct: 13 KTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVN--------PNIYPGNIAG 64
Query: 410 FVRIPKEQGLLSFWRGNFANVIRY 481
F I ++GL + G +I Y
Sbjct: 65 FKTILSKEGLRGLYTGGMPTLIGY 88
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,243,996
Number of Sequences: 5004
Number of extensions: 42845
Number of successful extensions: 147
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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