BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_E22
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 127 7e-30
Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical pr... 121 4e-28
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 121 4e-28
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 121 4e-28
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 121 4e-28
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 121 4e-28
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 117 7e-27
Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical pr... 115 3e-26
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 111 5e-25
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 51 7e-07
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 45 5e-05
CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical... 42 3e-04
AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling pr... 42 3e-04
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 42 3e-04
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 42 3e-04
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 42 3e-04
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 41 8e-04
Z78542-7|CAB01750.1| 300|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 35 0.038
Z49068-10|CAA88858.1| 296|Caenorhabditis elegans Hypothetical p... 33 0.12
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.20
X76114-1|CAA53720.1| 290|Caenorhabditis elegans Oxoglutarate/ma... 30 1.1
U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical pr... 30 1.1
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 29 1.9
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 29 1.9
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 127 bits (306), Expect = 7e-30
Identities = 59/88 (67%), Positives = 69/88 (78%)
Frame = +2
Query: 245 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIP 424
+D FA D L GG+SA+VSKT VAPIERVK+LLQVQ+ K I AD+RY GI+DAFVR+P
Sbjct: 16 SDAQKFAIDLLIGGVSASVSKTVVAPIERVKILLQVQYSHKDIPADKRYNGIIDAFVRVP 75
Query: 425 KEQGLLSFWRGNFANVIRYFRXKXLNFA 508
KEQG +SFWRGN NVIRYF + NFA
Sbjct: 76 KEQGFVSFWRGNMTNVIRYFPTQAFNFA 103
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +2
Query: 266 KDFLAGGISAAVSKTAVAPIE--RVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 439
+ ++GG++ S V P++ R +L + H +K+ YKG+VD ++ K +G
Sbjct: 128 RTLVSGGLAGCSSLCIVYPLDFIRTRLSADINHHTKR-----EYKGLVDCTMKTVKNEGF 182
Query: 440 LSFWRGNFANVIRYFRXKXLNFALXGQVQ 526
+ +RG ++ YF + + F L ++
Sbjct: 183 SALYRGFAISLQTYFIYRSVYFGLYDAIR 211
>Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical
protein T27E9.1c protein.
Length = 207
Score = 121 bits (291), Expect = 4e-28
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK IA D+RYKGI+D +R+PK
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPK 67
Query: 428 EQGLLSFWRGNFANVIRYFRXKXLNFA 508
EQG+ + WRGN ANVIRYF + +NFA
Sbjct: 68 EQGVAALWRGNLANVIRYFPTQAMNFA 94
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 121 bits (291), Expect = 4e-28
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK IA D+RYKGI+D +R+PK
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPK 67
Query: 428 EQGLLSFWRGNFANVIRYFRXKXLNFA 508
EQG+ + WRGN ANVIRYF + +NFA
Sbjct: 68 EQGVAALWRGNLANVIRYFPTQAMNFA 94
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +2
Query: 260 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 439
FA + +GG + A S V P++ + L + K A D+ +KG+ D ++I K G
Sbjct: 117 FAGNLASGGAAGATSLCFVYPLDFARTRLAAD-IGK--ANDREFKGLADCLIKIVKSDGP 173
Query: 440 LSFWRGNFANV 472
+ +RG F +V
Sbjct: 174 IGLYRGFFVSV 184
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 121 bits (291), Expect = 4e-28
Identities = 60/87 (68%), Positives = 66/87 (75%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
D F D +GG +AAVSKTAVAPIERVKLLLQVQ S IAAD+RYKGIVD VR+PK
Sbjct: 21 DTRKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASLTIAADKRYKGIVDVLVRVPK 80
Query: 428 EQGLLSFWRGNFANVIRYFRXKXLNFA 508
EQG + WRGN ANVIRYF + LNFA
Sbjct: 81 EQGYAALWRGNLANVIRYFPTQALNFA 107
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 260 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 439
FA + +GG + A S V P++ + L V K A ++ +KG+ D V+I K G
Sbjct: 130 FAGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGK--ANEREFKGLADCLVKIAKSDGP 186
Query: 440 LSFWRGNFANV 472
+ +RG F +V
Sbjct: 187 IGLYRGFFVSV 197
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 121 bits (291), Expect = 4e-28
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK IA D+RYKGI+D +R+PK
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPK 67
Query: 428 EQGLLSFWRGNFANVIRYFRXKXLNFA 508
EQG+ + WRGN ANVIRYF + +NFA
Sbjct: 68 EQGVAALWRGNLANVIRYFPTQAMNFA 94
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +2
Query: 260 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 439
FA + +GG + A S V P++ + L + K A D+ +KG+ D ++I K G
Sbjct: 117 FAGNLASGGAAGATSLCFVYPLDFARTRLAAD-IGK--ANDREFKGLADCLIKIVKSDGP 173
Query: 440 LSFWRGNFANV 472
+ +RG F +V
Sbjct: 174 IGLYRGFFVSV 184
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 121 bits (291), Expect = 4e-28
Identities = 60/87 (68%), Positives = 66/87 (75%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
D F D +GG +AAVSKTAVAPIERVKLLLQVQ S IAAD+RYKGIVD VR+PK
Sbjct: 21 DTRKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASLTIAADKRYKGIVDVLVRVPK 80
Query: 428 EQGLLSFWRGNFANVIRYFRXKXLNFA 508
EQG + WRGN ANVIRYF + LNFA
Sbjct: 81 EQGYAALWRGNLANVIRYFPTQALNFA 107
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 260 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 439
FA + +GG + A S V P++ + L V K A ++ +KG+ D V+I K G
Sbjct: 130 FAGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGK--ANEREFKGLADCLVKIAKSDGP 186
Query: 440 LSFWRGNFANV 472
+ +RG F +V
Sbjct: 187 IGLYRGFFVSV 197
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 117 bits (281), Expect = 7e-27
Identities = 53/83 (63%), Positives = 65/83 (78%)
Frame = +2
Query: 260 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 439
F D +GG +AA+SKTAVAPIERVKLLLQV VS+ + AD++YKGI+D R+PKEQG
Sbjct: 12 FLVDLASGGTAAAISKTAVAPIERVKLLLQVSDVSETVTADKKYKGIMDVLARVPKEQGY 71
Query: 440 LSFWRGNFANVIRYFRXKXLNFA 508
+FWRGN ANV+RYF + LNFA
Sbjct: 72 AAFWRGNLANVLRYFPTQALNFA 94
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +2
Query: 260 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 439
FA + +GG + A S V P++ V+ L V K + D+ ++G+ D FV+I K G
Sbjct: 117 FAGNLASGGAAGATSLCFVYPLDFVRTRLGAD-VGKGV--DREFQGLTDCFVKIVKSDGP 173
Query: 440 LSFWRGNFANV 472
+ +RG F +V
Sbjct: 174 IGLYRGFFVSV 184
>Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical
protein T27E9.1b protein.
Length = 128
Score = 115 bits (276), Expect = 3e-26
Identities = 54/79 (68%), Positives = 62/79 (78%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
D F D +GG +AAVSKTAVAPIERVKLLLQVQ SK IA D+RYKGI+D +R+PK
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAIAVDKRYKGIMDVLIRVPK 67
Query: 428 EQGLLSFWRGNFANVIRYF 484
EQG+ + WRGN ANVIRYF
Sbjct: 68 EQGVAALWRGNLANVIRYF 86
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 111 bits (266), Expect = 5e-25
Identities = 45/77 (58%), Positives = 63/77 (81%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
D + F+KDF+AG +AA+SKT +AP+ERVKL+LQ+Q+ +A + RYKGIVD F+R+P+
Sbjct: 14 DVIKFSKDFMAGATAAAISKTVIAPVERVKLILQLQNSQTTLALENRYKGIVDCFIRVPR 73
Query: 428 EQGLLSFWRGNFANVIR 478
EQG LSFWRGN+ N++R
Sbjct: 74 EQGFLSFWRGNWVNILR 90
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/87 (45%), Positives = 52/87 (59%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
D + +K LAG +AA+SKT AP +RVKL+LQ+Q S+ A+ Y GI D +I
Sbjct: 9 DVLETSKKCLAGSAAAAISKTTTAPFDRVKLVLQLQRQSEFAMAE--YNGIRDCISKIRL 66
Query: 428 EQGLLSFWRGNFANVIRYFRXKXLNFA 508
EQG ++ WRGN A V R LNFA
Sbjct: 67 EQGAMALWRGNGAGVARCLPNHTLNFA 93
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/87 (32%), Positives = 45/87 (51%)
Frame = +2
Query: 266 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 445
+ +AGG++ A+S+T AP +R+K+ LQV + G+V + E G+ S
Sbjct: 246 RHLVAGGVAGAMSRTCTAPFDRIKVYLQVN------STKTNKLGVVSCVHLLHAEGGIKS 299
Query: 446 FWRGNFANVIRYFRXKXLNFALXGQVQ 526
FWRGN NVI+ + F Q++
Sbjct: 300 FWRGNGINVIKIAPESAMKFMCYDQIK 326
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +2
Query: 275 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 454
LAG + A+S+TA+ P+E +K L ++ Q KG+ ++ ++G+ F++
Sbjct: 345 LAGSSAGAISQTAIYPMEVMKTRLALRRTG------QLDKGMFHFAHKMYTKEGIKCFYK 398
Query: 455 GNFANVI 475
G N++
Sbjct: 399 GYLPNLL 405
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 50.8 bits (116), Expect = 7e-07
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +2
Query: 272 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 451
FL G ++ A TAV PI+ VK +Q Q S + YK +D F ++ K +GLL +
Sbjct: 373 FLLGSVAGACGATAVYPIDLVKTRMQNQRTSGSFVGEVMYKNSLDCFKKVVKFEGLLGLY 432
Query: 452 RGNFANVI 475
RG ++
Sbjct: 433 RGLLPQIV 440
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/109 (28%), Positives = 51/109 (46%)
Frame = +2
Query: 152 CFVIPHPRVPQLPPRHIHLVKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIER 331
CF+ P P + H K+ +++ + FA F+AG +A + V P +
Sbjct: 530 CFLRDIPFSAIYFPAYAH-AKLASADEDGMNSPGTLFASAFIAGVPAAGL----VTPADV 584
Query: 332 VKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 478
+K LQV + Q Y G++D ++ KE+G +S W+G A V R
Sbjct: 585 IKTRLQVAARAGQTT----YNGVIDCARKLIKEEGPMSLWKGTAARVCR 629
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = +2
Query: 242 LADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 421
+ DP + F+ G + AP ER+KLLLQ+Q A ++ G +DA ++
Sbjct: 89 MEDPDSITSHFVGGCAAGMAQSVIAAPTERIKLLLQIQ----DDKAHTKFNGPIDATKQL 144
Query: 422 PKEQGLLSFWRGNFANVIR 478
+ GL S RG A V R
Sbjct: 145 LRTHGLKSLTRGFLATVAR 163
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = +2
Query: 242 LADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 421
+ DP + F+ G + AP ER+KLLLQ+Q A ++ G +DA ++
Sbjct: 89 MEDPDSITSHFVGGCAAGMAQSVIAAPTERIKLLLQIQ----DDKAHTKFNGPIDATKQL 144
Query: 422 PKEQGLLSFWRGNFANVIR 478
+ GL S RG A V R
Sbjct: 145 LRTHGLKSLTRGFLATVAR 163
>CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical
protein C42C1.10 protein.
Length = 313
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/71 (26%), Positives = 40/71 (56%)
Frame = +2
Query: 248 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 427
+P+ A+ AG S V++ + P++ +K+ Q+Q + +YKG++ + I +
Sbjct: 11 EPLTSAEYSEAGLASGIVTRMIIQPLDVLKIRFQLQEEPIRGKKSGKYKGVMQSIFLITR 70
Query: 428 EQGLLSFWRGN 460
E+G +FW+G+
Sbjct: 71 EEGAHAFWKGH 81
Score = 36.3 bits (80), Expect = 0.016
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = +2
Query: 254 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 433
V DF G +S ++ TA P++ ++ L Q + Y G + A I +++
Sbjct: 117 VRSTSDFACGALSGCLAMTAAMPLDVIRTRLVAQKAGHAV-----YTGTMHAVKHIWEKE 171
Query: 434 GLLSFWRGNFANVIRYFRXKXLNFAL 511
G+ ++RG +V++ + FAL
Sbjct: 172 GIAGYFRGWVPSVVQIAPFTGMQFAL 197
>AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling
protein (mitochondrialsubstrate carrier) protein 4
protein.
Length = 324
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +2
Query: 266 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 445
K L G S +++ A +P + VK+ +Q++ + + RY G D F + + QG
Sbjct: 121 KSMLCGAFSGLIAQFAASPTDLVKVQMQMEGLRRLQKQPLRYTGATDCFRSLYRTQGFFG 180
Query: 446 FWRGNFANVIRYFRXKXLNFALXGQVQXGV 535
W G N R + A V+ G+
Sbjct: 181 LWIGWMPNCQRAALLNMADIATYDSVKHGL 210
Score = 34.3 bits (75), Expect = 0.066
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 242 LADPVAFAKDFLAGGISAAVSKTA-VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR 418
L VA A LA I + S +++++ L + + K+ YKG+VD +++
Sbjct: 221 LTHAVASACAGLAAAIVSLPSDVVKTRMMDQIRHELDAKMMHKKNTHVDLYKGVVDCYIK 280
Query: 419 IPKEQGLLSFWRGNFANVIR 478
I K +G S ++G + IR
Sbjct: 281 IIKNEGFFSLYKGFLPSYIR 300
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +2
Query: 254 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 433
+ F ++ AG ++ + + P ER+K LLQVQ + Y G +D ++ K+
Sbjct: 102 MTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQQAG-SAGSGVHYDGPLDVVKKLYKQG 160
Query: 434 GLLSFWRGNFANVIR 478
G+ S +RG A ++R
Sbjct: 161 GISSIYRGTGATLLR 175
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/69 (21%), Positives = 34/69 (49%)
Frame = +2
Query: 269 DFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 448
+F+AGG+ + + P + VK+ +Q + K ++ G +D R ++G +
Sbjct: 7 NFIAGGVGGSCTVIVGHPFDTVKVRIQTMPMPKP-GEKPQFTGALDCVKRTVSKEGFFAL 65
Query: 449 WRGNFANVI 475
++G A ++
Sbjct: 66 YKGMAAPLV 74
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +2
Query: 254 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 433
+ F ++ AG ++ + + P ER+K LLQVQ + Y G +D ++ K+
Sbjct: 102 MTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQQAG-SAGSGVHYDGPLDVVKKLYKQG 160
Query: 434 GLLSFWRGNFANVIR 478
G+ S +RG A ++R
Sbjct: 161 GISSIYRGTGATLLR 175
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/69 (21%), Positives = 34/69 (49%)
Frame = +2
Query: 269 DFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 448
+F+AGG+ + + P + VK+ +Q + K ++ G +D R ++G +
Sbjct: 7 NFIAGGVGGSCTVIVGHPFDTVKVRIQTMPMPKP-GEKPQFTGALDCVKRTVSKEGFFAL 65
Query: 449 WRGNFANVI 475
++G A ++
Sbjct: 66 YKGMAAPLV 74
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +2
Query: 254 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 433
+ F ++ AG ++ + + P ER+K LLQVQ + Y G +D ++ K+
Sbjct: 102 MTFIQNANAGALAGVFTTIVMVPGERIKCLLQVQQAG-SAGSGVHYDGPLDVVKKLYKQG 160
Query: 434 GLLSFWRGNFANVIR 478
G+ S +RG A ++R
Sbjct: 161 GISSIYRGTGATLLR 175
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/69 (21%), Positives = 34/69 (49%)
Frame = +2
Query: 269 DFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 448
+F+AGG+ + + P + VK+ +Q + K ++ G +D R ++G +
Sbjct: 7 NFIAGGVGGSCTVIVGHPFDTVKVRIQTMPMPKP-GEKPQFTGALDCVKRTVSKEGFFAL 65
Query: 449 WRGNFANVI 475
++G A ++
Sbjct: 66 YKGMAAPLV 74
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +2
Query: 251 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 430
P++F + G + + P E + L+ + + Y G+V+A RI KE
Sbjct: 102 PLSFGMKAVLGMTAGGIGSFVGTPAE-IALIRMTGDGRLPVEQRRNYTGVVNALTRITKE 160
Query: 431 QGLLSFWRGNFANVIR 478
+G+L+ WRG V+R
Sbjct: 161 EGVLTLWRGCTPTVLR 176
Score = 34.3 bits (75), Expect = 0.066
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = +2
Query: 272 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 451
FLA IS + A P++ K +Q V I YK D + ++ K +G+ + W
Sbjct: 209 FLASMISGLATTIASMPVDIAKTRIQSMKV---IDGKPEYKNAFDVWGKVIKNEGIFALW 265
Query: 452 RGNFANVIRYFRXKXLNFALXGQV 523
+G +R L F + Q+
Sbjct: 266 KGFTPYYMRLGPHTVLTFIILEQM 289
>Z78542-7|CAB01750.1| 300|Caenorhabditis elegans Hypothetical
protein F20D1.9 protein.
Length = 300
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +2
Query: 260 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 439
F FLAG S A S V P++ +K +Q ++K A + YK I DAFV I K +G
Sbjct: 202 FYGSFLAGLTSGAASSFCVTPLDVIKTRMQT--INKG-ANEIVYKNIPDAFVTIFKNEGP 258
Query: 440 LSFWRG 457
+ ++G
Sbjct: 259 KALFKG 264
Score = 34.3 bits (75), Expect = 0.066
Identities = 19/97 (19%), Positives = 44/97 (45%)
Frame = +2
Query: 254 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 433
++ + LAGG++ + P+E +K +Q+Q + + Q+ +++ KE
Sbjct: 99 LSVGRGMLAGGLAGMFQISVTTPMELLK--IQMQDQGRTLKPGQQKLSATQLTMKLVKEN 156
Query: 434 GLLSFWRGNFANVIRYFRXKXLNFALXGQVQXGVPRR 544
G+ + ++G + + R + F L + PR+
Sbjct: 157 GIAALYKGLSSTLARDVTFSVIYFPLFAYLDSLAPRK 193
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 35.1 bits (77), Expect = 0.038
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +2
Query: 269 DFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 448
DF+AG + P++ VK LQ ++ YKGIVD V+ K++ +
Sbjct: 4 DFIAGWAAGGAGLLVGHPLDTVKARLQTMNI---------YKGIVDCMVKTMKQESVYGL 54
Query: 449 WRGNFANVIRYFRXKXLNFALXG 517
++G F I L FA G
Sbjct: 55 YKGMFVPFISTGALHSLLFAGYG 77
>Z49068-10|CAA88858.1| 296|Caenorhabditis elegans Hypothetical
protein K01C8.7a protein.
Length = 296
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 239 NLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR 418
N + A + ++G IS + PI K L +Q+ ++Q ++Y G++D +
Sbjct: 99 NFSTGSKLANNLISGCISGSAIMCITNPIWLTKTRLCLQYENQQ---SKKYAGMMDCLKK 155
Query: 419 IPKEQGLLSFWRGNFANVI 475
K++G +RG VI
Sbjct: 156 TVKQEGFFGLYRGFVTGVI 174
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.20
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 275 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 454
L G+S AV AV P+E VK V+ + Q A +YKG V I K +GL ++
Sbjct: 129 LGAGLSEAVF--AVTPMETVK----VKFIHDQGLAQPKYKGFVHGVGCIVKAEGLGGIYK 182
Query: 455 GNFANVIRYFRXKXLNF 505
G A + + + + F
Sbjct: 183 GVTATMAKQGSNQAIRF 199
>X76114-1|CAA53720.1| 290|Caenorhabditis elegans
Oxoglutarate/malate carrier protein protein.
Length = 290
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 251 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR-YKGIVDAFVRIPK 427
P+ F + L G + A P + V + ++Q+ SK +R YK +D VRI +
Sbjct: 96 PLPFYQKALLAGFAGACGGMVGTPGDLVNV--RMQNDSKLPLEQRRNYKHALDGLVRITR 153
Query: 428 EQGLLSFWRG 457
E+G + + G
Sbjct: 154 EEGFMKMFNG 163
>U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical
protein K11G12.5 protein.
Length = 290
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 251 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR-YKGIVDAFVRIPK 427
P+ F + L G + A P + V + ++Q+ SK +R YK +D VRI +
Sbjct: 96 PLPFYQKALLAGFAGACGGMVGTPGDLVNV--RMQNDSKLPLEQRRNYKHALDGLVRITR 153
Query: 428 EQGLLSFWRG 457
E+G + + G
Sbjct: 154 EEGFMKMFNG 163
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 82 HLPSVLPLITKLLQISCFKNQELVFRDP 165
HLP PLI K+L+I CFKN + +R+P
Sbjct: 173 HLPQCDPLIKKVLEI-CFKNVQ--YREP 197
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 82 HLPSVLPLITKLLQISCFKNQELVFRDP 165
HLP PLI K+L+I CFKN + +R+P
Sbjct: 173 HLPQCDPLIKKVLEI-CFKNVQ--YREP 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,733,919
Number of Sequences: 27780
Number of extensions: 251822
Number of successful extensions: 709
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -