Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_E21
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...   156   1e-38
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    38   0.004
U41011-4|AAA82287.1|  294|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    28   5.5  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    28   5.5  
AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score =  156 bits (378), Expect = 1e-38
 Identities = 69/85 (81%), Positives = 78/85 (91%)
 Frame = +2

Query: 47  MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAK 226
           MGKP+G+ TARK   HR+EQRW DK +KKAH+GT+WK+NPFGGASHAKGIVLEK+GV AK
Sbjct: 1   MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAK 60

Query: 227 QPNSAIRKCVRVQLIKNGKKVTAFV 301
           QPNSAIRKCVRVQLIKNGKK+TAFV
Sbjct: 61  QPNSAIRKCVRVQLIKNGKKITAFV 85



 Score =  105 bits (253), Expect = 2e-23
 Identities = 47/58 (81%), Positives = 52/58 (89%)
 Frame = +3

Query: 303 PXDGCLNHIEXNDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 476
           P DGCLN +E NDEVLV+GFGR GHAVGDIPGVRFK+VKVAN SL+AL+K KKERPRS
Sbjct: 86  PNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = +2

Query: 173 GASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFV 301
           G SH KGIVL+ V    K+PNS  RKC  V+L   G +V A++
Sbjct: 72  GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYI 113


>U41011-4|AAA82287.1|  294|Caenorhabditis elegans Hypothetical
           protein D2024.4 protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 118 VRPSLFTTVVHVLTRRSYSSG 56
           VRP + TTV+HV+ R    SG
Sbjct: 189 VRPGIMTTVIHVMDRNPMKSG 209


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 412 TLKRTPGMSPTA*PLRPNPATSTSS 338
           T  RTP  +P A P RP P+ S+++
Sbjct: 38  TTMRTPAATPAAPPTRPTPSRSSAA 62


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 412 TLKRTPGMSPTA*PLRPNPATSTSS 338
           T  RTP  +P A P RP P+ S+++
Sbjct: 167 TTMRTPAATPAAPPTRPTPSRSSAA 191


>AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.4 protein.
          Length = 466

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -2

Query: 142 HVGFLEFFVRPSLFTTVVHVLTRRS--YSSGFTHLDSTTPIGYGWE 11
           HV  +E+  R      VV V T+ +  +++G+T L  TT   YGW+
Sbjct: 158 HVWQIEWPERQRGTHAVVGVATKNAPLHAAGYTALIGTTDESYGWD 203


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,151,176
Number of Sequences: 27780
Number of extensions: 303597
Number of successful extensions: 638
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)