Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_E17
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 128 4e-30
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 128 4e-30
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 128 4e-30
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 128 4e-30
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 128 4e-30
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 88 4e-18
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 83 2e-16
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 83 2e-16
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 80 1e-15
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 66 1e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 45 5e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 39 0.002
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 39 0.003
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 36 0.017
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 36 0.023
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 36 0.023
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 36 0.030
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 34 0.070
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 34 0.070
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 34 0.070
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 32 0.28
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 31 0.86
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 30 1.1
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC087794-4|AAG53704.1| 275|Caenorhabditis elegans Hypothetical ... 29 3.5
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 234 STLHLAV 254
STLHL +
Sbjct: 65 STLHLVL 71
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 234 STLHLAV 254
STLHL +
Sbjct: 65 STLHLVL 71
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
Query: 234 STLHLAV 254
STLHL +
Sbjct: 141 STLHLVL 147
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 157 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Query: 234 STLHLAV 254
STLHL +
Sbjct: 217 STLHLVL 223
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 233 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292
Query: 234 STLHLAV 254
STLHL +
Sbjct: 293 STLHLVL 299
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 309 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368
Query: 234 STLHLAV 254
STLHL +
Sbjct: 369 STLHLVL 375
Score = 125 bits (302), Expect = 2e-29
Identities = 61/67 (91%), Positives = 63/67 (94%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 385 VKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444
Query: 234 STLHLAV 254
STLHL +
Sbjct: 445 STLHLVL 451
Score = 85.4 bits (202), Expect = 3e-17
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 182
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 461 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 234 STLHLAV 254
STLHL +
Sbjct: 65 STLHLVL 71
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
Query: 234 STLHLAV 254
STLHL +
Sbjct: 141 STLHLVL 147
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 157 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Query: 234 STLHLAV 254
STLHL +
Sbjct: 217 STLHLVL 223
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 233 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292
Query: 234 STLHLAV 254
STLHL +
Sbjct: 293 STLHLVL 299
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 309 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368
Query: 234 STLHLAV 254
STLHL +
Sbjct: 369 STLHLVL 375
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 461 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 520
Query: 234 STLHLAV 254
STLHL +
Sbjct: 521 STLHLVL 527
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 537 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596
Query: 234 STLHLAV 254
STLHL +
Sbjct: 597 STLHLVL 603
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 613 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 672
Query: 234 STLHLAV 254
STLHL +
Sbjct: 673 STLHLVL 679
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 689 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748
Query: 234 STLHLAV 254
STLHL +
Sbjct: 749 STLHLVL 755
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 765 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 824
Query: 234 STLHLAV 254
STLHL +
Sbjct: 825 STLHLVL 831
Score = 125 bits (302), Expect = 2e-29
Identities = 61/67 (91%), Positives = 63/67 (94%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 385 VKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444
Query: 234 STLHLAV 254
STLHL +
Sbjct: 445 STLHLVL 451
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 234 STLHLAV 254
STLHL +
Sbjct: 65 STLHLVL 71
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
Query: 234 STLHLAV 254
STLHL +
Sbjct: 141 STLHLVL 147
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 157 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Query: 234 STLHLAV 254
STLHL +
Sbjct: 217 STLHLVL 223
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 233 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292
Query: 234 STLHLAV 254
STLHL +
Sbjct: 293 STLHLVL 299
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 309 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368
Query: 234 STLHLAV 254
STLHL +
Sbjct: 369 STLHLVL 375
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 385 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444
Query: 234 STLHLAV 254
STLHL +
Sbjct: 445 STLHLVL 451
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 461 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 520
Query: 234 STLHLAV 254
STLHL +
Sbjct: 521 STLHLVL 527
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 537 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596
Query: 234 STLHLAV 254
STLHL +
Sbjct: 597 STLHLVL 603
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 613 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 672
Query: 234 STLHLAV 254
STLHL +
Sbjct: 673 STLHLVL 679
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 689 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748
Query: 234 STLHLAV 254
STLHL +
Sbjct: 749 STLHLVL 755
Score = 126 bits (305), Expect = 9e-30
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQK+
Sbjct: 765 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQ 824
Query: 234 STLHLAV 254
STLHL +
Sbjct: 825 STLHLVL 831
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 128 bits (308), Expect = 4e-30
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLE GRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 234 STLHLAV 254
STLHL +
Sbjct: 65 STLHLVL 71
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 88.2 bits (209), Expect = 4e-18
Identities = 38/67 (56%), Positives = 51/67 (76%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ +T +DY +
Sbjct: 5 VKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGG 64
Query: 234 STLHLAV 254
S LHL +
Sbjct: 65 SVLHLVL 71
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/65 (53%), Positives = 43/65 (66%)
Frame = +1
Query: 295 YSTPXXXXXXXXXXXLAVLRFYKVDXNGKIHRLRRECTGEQCGAGVFMAVMXDRHYCGKC 474
Y+TP LAVL++YK+D NGKI RLR+EC CG GVFMA +RHYCG+C
Sbjct: 79 YTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRC 138
Query: 475 HSTMV 489
H T+V
Sbjct: 139 HDTLV 143
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLE SD I E
Sbjct: 4 VKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSE 58
Query: 234 STLHLAVE 257
+T+++ +E
Sbjct: 59 ATIYVNLE 66
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/65 (53%), Positives = 43/65 (66%)
Frame = +1
Query: 295 YSTPXXXXXXXXXXXLAVLRFYKVDXNGKIHRLRRECTGEQCGAGVFMAVMXDRHYCGKC 474
Y+TP LAVL++YK+D NGKI RLR+EC CG GVFMA +RHYCG+C
Sbjct: 79 YTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRC 138
Query: 475 HSTMV 489
H T+V
Sbjct: 139 HDTLV 143
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLE SD I E
Sbjct: 4 VKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSE 58
Query: 234 STLHLAVE 257
+T+++ +E
Sbjct: 59 ATIYVNLE 66
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +3
Query: 51 SVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQK 230
SVKTL GKTI + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE R L YNI+
Sbjct: 164 SVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRD 223
Query: 231 ESTLHL 248
E +HL
Sbjct: 224 EDIIHL 229
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 63 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKESTL 242
+TG IT VE SD I+++ K+ + + P ++ Q RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLCKDQ----RTISDYNIKNGSTL 151
Query: 243 HLAV 254
L V
Sbjct: 152 RLEV 155
Score = 34.3 bits (75), Expect = 0.070
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 51 SVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 149
SVKT TGKTIT+E +NVK +++DK+G+
Sbjct: 62 SVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 152
VKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKE 233
VK L G + ++ DT+ ++K I+ + IP + L F+GK+LE ++ DYNIQK
Sbjct: 158 VKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKS 216
Query: 234 STL 242
ST+
Sbjct: 217 STI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +3
Query: 69 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---XGRTLSDYNIQKEST 239
G+T TL+ SDT+ +VKAKI +K I PN Q+L+ L+ TL D + + ST
Sbjct: 111 GRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGST 170
Query: 240 LHLAV 254
L L V
Sbjct: 171 LRLEV 175
Score = 31.5 bits (68), Expect = 0.49
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 51 SVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEXGRTLSDYNIQ 227
S+KT TGK IT+E S VK +++DK+G+ G Q +E T+ D IQ
Sbjct: 4 SIKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDVKIQ 58
Query: 228 K 230
+
Sbjct: 59 E 59
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +3
Query: 66 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKESTLH 245
+G L V SDTI VK I + + R++ K LE TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 246 L 248
L
Sbjct: 241 L 241
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 63 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKESTL 242
L GKT TL V SDT+E K ++ R+ + GK L T +YNI ST+
Sbjct: 49 LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNISNNSTM 104
Query: 243 HL 248
L
Sbjct: 105 DL 106
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = +3
Query: 54 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 185
VKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 4 VKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 36.3 bits (80), Expect = 0.017
Identities = 17/65 (26%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +3
Query: 72 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL-EXGRTLSDYNIQKESTLHL 248
K I +E++ +T+ +K +I+ + + N+Q L+F G +L + +T++D I ++ + +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKITM 91
Query: 249 AVEAS 263
V+ S
Sbjct: 92 NVKMS 96
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 84 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKESTLHL 248
L V SDTI ++K +I + + R++ GK LE +L+ YNIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +3
Query: 30 GE*RCKFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTL 209
G KF+V L G I +E++ DTI V + G+ ++QRL+ K+L+ +TL
Sbjct: 179 GSKNIKFNV-ILHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTL 237
Query: 210 SDYNIQKESTL 242
+ I+ S +
Sbjct: 238 EEAGIKDGSVI 248
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 35.5 bits (78), Expect = 0.030
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +3
Query: 84 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKESTL 242
L V SDTI +K +I GI R K LE TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.3 bits (75), Expect = 0.070
Identities = 19/68 (27%), Positives = 38/68 (55%)
Frame = +3
Query: 60 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKEST 239
++ G+ ++ +++E +K KI+ + GIP + L GK L + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 240 LHLAVEAS 263
+ L V AS
Sbjct: 207 VELLVRAS 214
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +3
Query: 63 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKESTL 242
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++ + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 243 HLAVE 257
+L V+
Sbjct: 644 YLQVK 648
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +3
Query: 63 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNIQKESTL 242
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++ + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 243 HLAVE 257
+L V+
Sbjct: 644 YLQVK 648
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 57 KTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLE 194
+TLT LE+ TI VKA + ++G P Q+LI+ GK L+
Sbjct: 57 RTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILD 104
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 30.7 bits (66), Expect = 0.86
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 51 SVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEXGRTLSDYNIQ 227
S+KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D IQ
Sbjct: 4 SIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDVKIQ 58
Query: 228 K 230
+
Sbjct: 59 E 59
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 45 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNI 224
+ ++KTL + T+ + DTI+++ + + I QR+I G+ L +T+ I
Sbjct: 22 RVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAGI 81
Query: 225 QKESTLHL 248
T+HL
Sbjct: 82 SDGQTVHL 89
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 45 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEXGRTLSDYNI 224
+ ++KTL + T+ + DTI+++ + + I QR+I G+ L +T+ I
Sbjct: 22 RVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAGI 81
Query: 225 QKESTLHL 248
T+HL
Sbjct: 82 SDGQTVHL 89
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 51 SVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 152
++ TL G+TI V P + I + K+ EG+P
Sbjct: 278 TISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>AC087794-4|AAG53704.1| 275|Caenorhabditis elegans Hypothetical
protein Y32G9A.5 protein.
Length = 275
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 282 AFLSATTKPQQPGGGWIPSGYCSPRGYVHXPAAFQQRSTSVDWEG 148
AF S + +PQ PG P G +PR Y AF S + + G
Sbjct: 125 AFASTSDEPQYPGSSQYPQGSSAPR-YPGNYNAFASTSDAPQYPG 168
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -1
Query: 282 AFLSATTKPQQPGGGWIPSGYCSPRGYVHXPAAFQQRSTSVDWEG 148
AF S + PQ PG P G +PR Y AF S + + G
Sbjct: 156 AFASTSDAPQYPGSSQYPQGSSAPR-YPGNYNAFASTSDAPQYPG 199
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -1
Query: 282 AFLSATTKPQQPGGGWIPSGYCSPRGYVHXPAAFQQRSTSVDWEG 148
AF S + PQ PG P G +PR Y AF S + G
Sbjct: 94 AFASTSDAPQYPGSSQYPQGSSAPR-YPGNYNAFASTSDEPQYPG 137
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 72 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRL 170
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,447,889
Number of Sequences: 27780
Number of extensions: 232754
Number of successful extensions: 663
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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