Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_E14
(506 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 173 3e-42
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 165 5e-40
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 146 3e-34
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 141 9e-33
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 140 2e-32
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 123 2e-27
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 119 3e-26
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 117 2e-25
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 114 1e-24
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 104 1e-21
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 97 3e-19
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 85 7e-16
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 71 2e-11
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 63 3e-09
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 63 3e-09
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 62 7e-09
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 60 3e-08
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 60 3e-08
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 56 6e-07
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 56 6e-07
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 49 5e-05
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 48 1e-04
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 46 7e-04
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 44 0.002
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 40 0.024
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.17
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 36 0.53
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 34 1.6
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 33 2.8
UniRef50_A5KAX0 Cluster: Cation-transporting ATPase; n=1; Plasmo... 33 3.7
UniRef50_Q2RMQ4 Cluster: 2-polyprenylphenol 6-hydroxylase; n=4; ... 32 6.5
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 6.5
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 32 8.6
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 173 bits (420), Expect = 3e-42
Identities = 81/106 (76%), Positives = 90/106 (84%)
Frame = +1
Query: 46 KRFRNRPPLFLNRKGGMXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 225
K F+ +P +FL K +K +R +K+VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI
Sbjct: 50 KAFQKQPHVFLASKVS-SKKPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 108
Query: 226 LTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPCFR 363
LTGVVQKMKM TIVIRRDYLHY+ KYN F KRH+NMSVHLSPCFR
Sbjct: 109 LTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFR 154
Score = 52.0 bits (119), Expect = 7e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
VEIGD+VT+GECRPLSKTVRFNVL
Sbjct: 156 VEIGDVVTVGECRPLSKTVRFNVL 179
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Frame = +1
Query: 46 KRFRNRPPLFLNRKGGMXRKD----MRHHKNVGLGFKTPRE 156
+ F+ +P +FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 7 RSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 165 bits (401), Expect = 5e-40
Identities = 78/115 (67%), Positives = 92/115 (80%), Gaps = 5/115 (4%)
Frame = +1
Query: 34 IXQRKRFRNRPPLFLNRKG---GMXRKDM--RHHKNVGLGFKTPREAIEGTYIDKKCPFT 198
I + ++ +P +F N+K G K+ R++KN+GLGFKTP+EAIEGTYIDKKCPFT
Sbjct: 4 IQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFT 63
Query: 199 GNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPCFR 363
GNVSIRGRIL+GVV KMKM TIVIRRDYLHY+ KYN F KRH+NMSVHLSPCFR
Sbjct: 64 GNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V+IGDIVT+GECRPLSKTVRFNVL
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVL 143
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 146 bits (354), Expect = 3e-34
Identities = 67/115 (58%), Positives = 84/115 (73%), Gaps = 1/115 (0%)
Frame = +1
Query: 34 IXQRKRFRNRPPLFLNRKGGMXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSI 213
+ + F+ +P +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPFTG VSI
Sbjct: 7 VQSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSI 66
Query: 214 RGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPCFRAR-GD 375
RG+ILTG V KM TIVIRR YLHY+PKYN + KRH+N+ VH+SP FR + GD
Sbjct: 67 RGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGD 121
Score = 47.6 bits (108), Expect = 2e-04
Identities = 18/24 (75%), Positives = 24/24 (100%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V++GDIVT+G+CRP+SKTVRFNV+
Sbjct: 117 VQVGDIVTVGQCRPISKTVRFNVV 140
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 141 bits (341), Expect = 9e-33
Identities = 63/110 (57%), Positives = 80/110 (72%)
Frame = +1
Query: 34 IXQRKRFRNRPPLFLNRKGGMXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSI 213
+ + F+ +P +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF G VSI
Sbjct: 7 VQSERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSI 63
Query: 214 RGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPCFR 363
RGRILTG V KM TI+IRR+YLH++PKYN + KRH+N++ H+SP FR
Sbjct: 64 RGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR 113
Score = 45.6 bits (103), Expect = 7e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +2
Query: 377 GDIVTIGECRPLSKTVRFNVL 439
GD+VT+G+CRPLSKTVRFNVL
Sbjct: 117 GDVVTVGQCRPLSKTVRFNVL 137
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 140 bits (338), Expect = 2e-32
Identities = 65/118 (55%), Positives = 84/118 (71%), Gaps = 4/118 (3%)
Frame = +1
Query: 19 NAKWRIXQRKR-FRNRPPLFLNRKGGMXRKD---MRHHKNVGLGFKTPREAIEGTYIDKK 186
N W+ + +R F+ + +F N K + +K +R+ K VGLGFK P++AIEG YIDKK
Sbjct: 27 NILWQTFKNQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKK 86
Query: 187 CPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPCF 360
CPFTGNVS+RG IL G+V KM TI+IRRDYLHY+ KYN + KRHRN+ VH+SP F
Sbjct: 87 CPFTGNVSVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAF 144
Score = 45.6 bits (103), Expect = 7e-04
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 356 ASGHVEIGDIVTIGECRPLSKTVRFNVL 439
A G V+ GDIV G+CRPLSKTVRFNVL
Sbjct: 143 AFGPVKEGDIVVCGQCRPLSKTVRFNVL 170
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 123 bits (297), Expect = 2e-27
Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 6/114 (5%)
Frame = +1
Query: 52 FRNRPPLFLNRKG----GMXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRG 219
++ + P+F+ +K + + D R+ + VGLG+KTP+ A+EGT++D KCPFTGNVSIRG
Sbjct: 11 YQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRG 70
Query: 220 RILTGVVQKM-KMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPCFRAR-GD 375
RIL GVV KM T+V+RR+YLHY+ KY + KRH N SVH SP + GD
Sbjct: 71 RILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPALDVKEGD 124
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V+ GD VT+GECRPLSKTVRFNVL
Sbjct: 120 VKEGDTVTVGECRPLSKTVRFNVL 143
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 119 bits (287), Expect = 3e-26
Identities = 50/84 (59%), Positives = 65/84 (77%)
Frame = +1
Query: 109 MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYL 288
+R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM TI+IRR+YL
Sbjct: 15 IRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMHRTIIIRRNYL 74
Query: 289 HYLPKYNXFXKRHRNMSVHLSPCF 360
H++ KY + KRH++++VH SP F
Sbjct: 75 HFIKKYQRYQKRHKSLAVHCSPAF 98
Score = 39.9 bits (89), Expect = 0.032
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 377 GDIVTIGECRPLSKTVRFNVL 439
GD V IG+CRPLSKT+R+NVL
Sbjct: 103 GDEVVIGQCRPLSKTIRYNVL 123
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 117 bits (281), Expect = 2e-25
Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +1
Query: 94 MXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVI 273
+ +K KN+G+G K P EAI Y DKKCPF G +SIRGRIL G V KM +++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 274 RRDYLHYLPKYNXFXKRHRNMSVHLSPCFRAR-GD 375
RRDYLH++ KY F KRH+N+ H SPCFR + GD
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFRVQEGD 110
Score = 48.4 bits (110), Expect = 9e-05
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 338 PCICRLASGHVEIGDIVTIGECRPLSKTVRFNVL 439
PC C V+ GD+VTIG+CRPLSKT+RFNVL
Sbjct: 97 PCHCSPCF-RVQEGDLVTIGQCRPLSKTIRFNVL 129
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 114 bits (274), Expect = 1e-24
Identities = 65/140 (46%), Positives = 82/140 (58%), Gaps = 30/140 (21%)
Frame = +1
Query: 46 KRFRNRPPLFLN-RKGGMXRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 210
K F +P +FL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 KAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 211 IRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYN------------------------XFX 318
IRGRI+ G KM TI++RR+YLH++ KY +
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISDLGCRYE 126
Query: 319 KRHRNMSVHLSPCFRAR-GD 375
KRH N+ H+SPCFR + GD
Sbjct: 127 KRHSNIPAHVSPCFRVKEGD 146
Score = 41.9 bits (94), Expect = 0.008
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V+ GD V IG+CRPLSKTVRFNVL
Sbjct: 142 VKEGDHVIIGQCRPLSKTVRFNVL 165
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 104 bits (250), Expect = 1e-21
Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Frame = +1
Query: 136 GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXF 315
GFK P A YIDKKCPFTG+V++RGR+ GVV+KMK TIV+ +Y+HY KY +
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKTIVVVANYVHYSKKYKRY 97
Query: 316 XKRHRNMSVHLSPCFRAR---GDW*YCNDRR 399
+RH N SVH+SPCF GD C + R
Sbjct: 98 SRRHTNFSVHMSPCFEGMINVGDTVICGETR 128
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 96.7 bits (230), Expect = 3e-19
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = +1
Query: 79 NRKGGMXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMX 258
N +G K R KN+GLGFKTPREAI+G Y+DKKCPFTG VSIRGRIL + + +M
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 259 XTIVIRRDYLHYL 297
TI++ RDYLH++
Sbjct: 91 STIIVARDYLHFV 103
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 85.4 bits (202), Expect = 7e-16
Identities = 36/59 (61%), Positives = 46/59 (77%)
Frame = +1
Query: 175 IDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLS 351
IDKKCPF G +++RGRIL G V+K+KM T++IR DYL +L KYN F KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLS 81
Score = 42.7 bits (96), Expect = 0.005
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2
Query: 371 EIGDIVTIGECRPLSKTVRFNVL 439
++GDIV I ECRP+SKTVRFNV+
Sbjct: 87 KVGDIVIIAECRPISKTVRFNVI 109
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 70.5 bits (165), Expect = 2e-11
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 106 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDY 285
+ R K++GLG K PR + D CPF GN+ +RG IL GVV +M T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 286 LHYLPKYNXFXKRHRNMSVHLSPCFRAR-GD 375
Y KY + +R + H PC A+ GD
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPCIDAQEGD 90
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 63.3 bits (147), Expect = 3e-09
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +1
Query: 121 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLP 300
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 301 KYNXFXKRHRNMSVHLSPCFRAR-GDW 378
KY + ++ RN+ HL C + GD+
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIKVNVGDY 114
Score = 31.9 bits (69), Expect = 8.6
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V +GD V IGE RPL+K + F VL
Sbjct: 109 VNVGDYVVIGETRPLAKFISFVVL 132
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 63.3 bits (147), Expect = 3e-09
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 121 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLP 300
+++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 301 KYNXFXKRHRNMSVHLSPCFRAR-GD 375
KY + KR + H C A+ GD
Sbjct: 59 KYQRYEKRRSKIHAHNPACISAKVGD 84
Score = 35.1 bits (77), Expect = 0.92
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 371 EIGDIVTIGECRPLSKTVRFNVL 439
++GDIVTI ECRP+SKT F V+
Sbjct: 81 KVGDIVTIVECRPISKTKSFVVV 103
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 62.1 bits (144), Expect = 7e-09
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 121 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLP 300
+N+GL K P E D CP+ G +S+RG++LTG V M + V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 301 KYNXFXKRHRNMSVHLSPCFRAR-GD 375
KY + + VH+ C + + GD
Sbjct: 60 KYERKATKIKKYHVHVPDCIKIKPGD 85
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 60.1 bits (139), Expect = 3e-08
Identities = 21/60 (35%), Positives = 39/60 (65%)
Frame = +1
Query: 178 DKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPC 357
D+ CPF G++ +RG+I+ G + K+ M +I++ R+++ Y+ K+ + KR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Score = 36.7 bits (81), Expect = 0.30
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 362 GHVEIGDIVTIGECRPLSKTVRFNVL 439
G V +GD V I ECRPLSKT+ F V+
Sbjct: 80 GDVNVGDSVRIMECRPLSKTITFCVI 105
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 60.1 bits (139), Expect = 3e-08
Identities = 29/77 (37%), Positives = 41/77 (53%)
Frame = +1
Query: 127 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKY 306
+GL + P E T D+ CPF G +S+RG+ L G V M T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 307 NXFXKRHRNMSVHLSPC 357
+ F KR + H C
Sbjct: 59 DRFMKRRSRVPAHAPDC 75
Score = 32.7 bits (71), Expect = 4.9
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 374 IGDIVTIGECRPLSKT 421
+GD VTI ECRPLSKT
Sbjct: 80 VGDTVTIAECRPLSKT 95
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 55.6 bits (128), Expect = 6e-07
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 121 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLP 300
KN+G+ P ++ D CP+ G++ +R ++L V+K++M V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 301 KYNXFXKRHRNMSVHLSPCFRAR-GD 375
KYN + +R + M V + C + GD
Sbjct: 61 KYNRYERRRKRMRVRVPECIEVKPGD 86
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 55.6 bits (128), Expect = 6e-07
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 178 DKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPC 357
D CP+ G + +RG +L GVV K + +V++ YL+Y KYN + +R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 358 FRAR-GD 375
+ GD
Sbjct: 84 ISVKEGD 90
Score = 35.1 bits (77), Expect = 0.92
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V+ GD+V IGE P+SKTV+F VL
Sbjct: 86 VKEGDVVVIGETMPISKTVKFTVL 109
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 178 DKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPC 357
D CP+ G + +RG++L V+K+KM V +YL+Y KY + R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 358 FRAR-GD 375
+ GD
Sbjct: 81 IPVKPGD 87
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 48.0 bits (109), Expect = 1e-04
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +1
Query: 121 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYL 297
+++G+ G K P E D +CPF G +S+RG+IL G+V KM IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 298 PKYNXFXKRHRNMSVHLSPCFRAR-GD 375
KY + + + PC A+ GD
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCMEAKIGD 84
Score = 33.5 bits (73), Expect = 2.8
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 371 EIGDIVTIGECRPLSKTVRFNVL 439
+IGDI+TI ECRPL+K F V+
Sbjct: 81 KIGDIITIAECRPLNKGSSFVVI 103
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 45.6 bits (103), Expect = 7e-04
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 121 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYL 297
+ +GL P REA +G DK PF G + IRG++ G + K T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 298 PKYNXFXKRHRNMSVHL 348
K+ + + + H+
Sbjct: 60 TKFKRYARGRSRIHAHV 76
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 178 DKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPC 357
DKKCP G++ +RG G V K T+ I ++LPKY + R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 358 FR 363
+
Sbjct: 76 LK 77
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 40.3 bits (90), Expect = 0.024
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRF 430
V IG IVT+GEC+PLSKTVRF
Sbjct: 46 VHIGHIVTVGECQPLSKTVRF 66
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 37.5 bits (83), Expect = 0.17
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = -3
Query: 360 EARRQMHGHIPVPFXEXIVFG*VVKVIXXXXXXXXXXXXXXXAGEDAAADRNVASEGTLL 181
E+ R + +I V F ++F V++VI G+D +D N SE T
Sbjct: 88 ESWRDVGSNILVSFFVSVIFWNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFF 147
Query: 180 VNVGTLNRLSGSFE 139
VNV T N FE
Sbjct: 148 VNVRTFNGSFWGFE 161
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 35.9 bits (79), Expect = 0.53
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 217 GRILTG-VVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPCFRARGD 375
GR L G V+Q KM T+ ++ DY ++ PK F + VH S F GD
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENFCVTGD 77
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 34.3 bits (75), Expect = 1.6
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 371 EIGDIVTIGECRPLSKTVRFNVL 439
E+GD V I ECRP+SKT F ++
Sbjct: 67 EVGDFVKIAECRPISKTKHFRLV 89
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 33.5 bits (73), Expect = 2.8
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 19 NAKWRIXQRK-RFRNRPPLFLNRKGGMXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPF 195
NA+ R QR R+R R G R+D + H N G RE + GT+ K
Sbjct: 20 NARHRDAQRHGNARHRDA---QRHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHV 76
Query: 196 TGNVSIRGRILTG 234
TG S G +TG
Sbjct: 77 TGTHSSTGTHVTG 89
>UniRef50_A5KAX0 Cluster: Cation-transporting ATPase; n=1;
Plasmodium vivax|Rep: Cation-transporting ATPase -
Plasmodium vivax
Length = 1914
Score = 33.1 bits (72), Expect = 3.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 320 NGTGICPCICRLASGHVEIGDIVTIGECRPLSKTVRFNV 436
N T PC C L +G V + + + GE RP+ KT N+
Sbjct: 491 NSTMTMPCDCVLLTGQVLVDESLLTGESRPMKKTCISNL 529
>UniRef50_Q2RMQ4 Cluster: 2-polyprenylphenol 6-hydroxylase; n=4;
Rhodospirillaceae|Rep: 2-polyprenylphenol 6-hydroxylase
- Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 519
Score = 32.3 bits (70), Expect = 6.5
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -3
Query: 477 LKDLFEPLPFETFKTLNLTVLDKGLHSPIVTISPISTCPEARRQMHGHIPVPFXEXIVFG 298
L+D P PFE + T LD+ L S P+ + Q+H I P E
Sbjct: 92 LQDSLPPFPFEDVRRTVETELDRPLESAFSVFDPVPVAAASIAQVHFAITAPDAEGHTRE 151
Query: 297 *VVKVI 280
VKV+
Sbjct: 152 VAVKVL 157
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 32.3 bits (70), Expect = 6.5
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 80 TGKVA*XGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 199
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 31.9 bits (69), Expect = 8.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 362 GHVEIGDIVTIGECRPLSKTVRFNV 436
G +GD+V I ECRPLSK R+ +
Sbjct: 57 GRANLGDVVRIIECRPLSKLKRWRL 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,401,902
Number of Sequences: 1657284
Number of extensions: 7845716
Number of successful extensions: 17998
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 17609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17991
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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