Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_E14
(506 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 134 5e-32
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 126 1e-29
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 126 1e-29
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 125 2e-29
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 114 4e-26
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 110 7e-25
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 29 2.8
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 27 6.5
08_02_0383 - 16539472-16539633,16543044-16543205 27 8.7
02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023... 27 8.7
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 134 bits (323), Expect = 5e-32
Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +1
Query: 112 RHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMXXTIVIRRDYLH 291
R KN+GLGFKTPREAIEGTYIDKKCPFTG VSIRGRI+ G KM TI++RR+YLH
Sbjct: 25 RFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLH 84
Query: 292 YLPKYNXFXKRHRNMSVHLSPCFRAR-GD 375
++ KY + KRH N+ H+SPCFR + GD
Sbjct: 85 FVKKYQRYEKRHSNIPAHISPCFRVKEGD 113
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V+ GD V IG+CRPLSKTVRFNV+
Sbjct: 109 VKEGDHVIIGQCRPLSKTVRFNVI 132
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 126 bits (304), Expect = 1e-29
Identities = 65/125 (52%), Positives = 82/125 (65%), Gaps = 15/125 (12%)
Frame = +1
Query: 46 KRFRNRPPLFLN-RKGGMXRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 210
K F +P +FL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 KAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 211 IRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYN---------XFXKRHRNMSVHLSPCFR 363
IRGRI+ G KM TI++RR+YLH++ KY + KRH N+ H+SPCFR
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHVSPCFR 126
Query: 364 AR-GD 375
+ GD
Sbjct: 127 VKEGD 131
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V+ GD V IG+CRPLSKTVRFNVL
Sbjct: 127 VKEGDHVIIGQCRPLSKTVRFNVL 150
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 126 bits (304), Expect = 1e-29
Identities = 65/125 (52%), Positives = 82/125 (65%), Gaps = 15/125 (12%)
Frame = +1
Query: 46 KRFRNRPPLFLN-RKGGMXRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 210
K F +P +FL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 KAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 211 IRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYN---------XFXKRHRNMSVHLSPCFR 363
IRGRI+ G KM TI++RR+YLH++ KY + KRH N+ H+SPCFR
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHVSPCFR 126
Query: 364 AR-GD 375
+ GD
Sbjct: 127 VKEGD 131
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V+ GD V IG+CRPLSKTVRFNVL
Sbjct: 127 VKEGDHVIIGQCRPLSKTVRFNVL 150
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 125 bits (301), Expect = 2e-29
Identities = 65/123 (52%), Positives = 79/123 (64%), Gaps = 13/123 (10%)
Frame = +1
Query: 46 KRFRNRPPLFL----NRKGGMXRKD-MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 210
+ F +P +FL KG K R KN+GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 RAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 211 IRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYN-------XFXKRHRNMSVHLSPCFRAR 369
IRGRI+ G KM TI++RR+YLH++ KY + KRH N+ H+SPCFR +
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHISPCFRVK 126
Query: 370 -GD 375
GD
Sbjct: 127 EGD 129
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V+ GD V IG+CRPLSKTVRFNVL
Sbjct: 125 VKEGDHVIIGQCRPLSKTVRFNVL 148
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 114 bits (274), Expect = 4e-26
Identities = 65/140 (46%), Positives = 82/140 (58%), Gaps = 30/140 (21%)
Frame = +1
Query: 46 KRFRNRPPLFLN-RKGGMXRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 210
K F +P +FL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 KAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 211 IRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYN------------------------XFX 318
IRGRI+ G KM TI++RR+YLH++ KY +
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISDLGCRYE 126
Query: 319 KRHRNMSVHLSPCFRAR-GD 375
KRH N+ H+SPCFR + GD
Sbjct: 127 KRHSNIPAHVSPCFRVKEGD 146
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
V+ GD V IG+CRPLSKTVRFNVL
Sbjct: 142 VKEGDHVIIGQCRPLSKTVRFNVL 165
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 110 bits (264), Expect = 7e-25
Identities = 53/92 (57%), Positives = 66/92 (71%), Gaps = 5/92 (5%)
Frame = +1
Query: 46 KRFRNRPPLFLN-RKGGMXRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 210
K F +P +FL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 KAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 211 IRGRILTGVVQKMKMXXTIVIRRDYLHYLPKY 306
IRGRI+ G KM TI++RR+YLH++ KY
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKY 98
>03_05_0248 +
22348504-22348568,22349064-22349371,22349476-22350039,
22350082-22350128,22351244-22351715,22352349-22352611
Length = 572
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 160 IEGTYIDKKCPFTGNVSIRGRILTGVVQKM-KMXXTIVIRRDYLHYLPKY 306
+ GT PFTG++S G + + KM + +V +DYLH K+
Sbjct: 461 VRGTEDAPITPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKH 510
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 79 NRKGGMXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 222
N G ++RH ++G E T +DK+ P +G S+ GR
Sbjct: 117 NLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGR 164
>08_02_0383 - 16539472-16539633,16543044-16543205
Length = 107
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 226 LTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVH 345
+ G+V KM ++V+ D L + YN + KR H
Sbjct: 4 VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAH 43
>02_05_0938 +
32901143-32901215,32901841-32901982,32902243-32902314,
32902573-32902644,32902711-32902782,32902913-32902948,
32903001-32903072,32903319-32903387,32903483-32903554,
32903668-32903739,32903838-32903909,32904153-32904224,
32904470-32904541,32904623-32904694,32904782-32904853,
32904911-32905003,32905150-32905218,32905315-32905386,
32905479-32905552,32905643-32905771,32905966-32906331,
32906584-32906954,32907522-32907890
Length = 884
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 252 DAXNYRDPPRLPSLPTQIQXVRXTAQEYVRAFVALLQGT 368
D Y DPP P+LP + T YV +V+L G+
Sbjct: 819 DCLVYPDPPSKPALPPALPQ-SSTVPSYVNEYVSLRGGS 856
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,457,410
Number of Sequences: 37544
Number of extensions: 228539
Number of successful extensions: 457
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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