Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_E14
         (506 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   145   3e-35
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   145   3e-35
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   139   2e-33
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    29   4.8  
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    29   4.8  
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    29   4.8  

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  145 bits (352), Expect = 3e-35
 Identities = 71/109 (65%), Positives = 86/109 (78%), Gaps = 3/109 (2%)
 Frame = +1

Query: 46  KRFRNRPPLFLNRK---GGMXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 216
           + F+ +  + LNRK   G   +K +R  ++VGLGFKTPREAI+GTYIDKKCP+TG+V IR
Sbjct: 7   RAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIR 66

Query: 217 GRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPCFR 363
           GRILTGVV+K KM  TIVIRRDYLH++ KY+ F KRHRNMSVH SP FR
Sbjct: 67  GRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 115



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = +2

Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
           VE GDIVTIGECRPLSKTVRFNVL
Sbjct: 117 VEHGDIVTIGECRPLSKTVRFNVL 140


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  145 bits (352), Expect = 3e-35
 Identities = 71/109 (65%), Positives = 86/109 (78%), Gaps = 3/109 (2%)
 Frame = +1

Query: 46  KRFRNRPPLFLNRK---GGMXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 216
           + F+ +  + LNRK   G   +K +R  ++VGLGFKTPREAI+GTYIDKKCP+TG+V IR
Sbjct: 7   RAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIR 66

Query: 217 GRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPCFR 363
           GRILTGVV+K KM  TIVIRRDYLH++ KY+ F KRHRNMSVH SP FR
Sbjct: 67  GRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 115



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = +2

Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
           VE GDIVTIGECRPLSKTVRFNVL
Sbjct: 117 VEHGDIVTIGECRPLSKTVRFNVL 140


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  139 bits (336), Expect = 2e-33
 Identities = 63/96 (65%), Positives = 76/96 (79%)
 Frame = +1

Query: 76  LNRKGGMXRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKM 255
           + RK    +K  R ++ +GLGF+ P EAI+GTYIDKKCP+TG+V IRGRILTGVV+K KM
Sbjct: 19  VRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKM 78

Query: 256 XXTIVIRRDYLHYLPKYNXFXKRHRNMSVHLSPCFR 363
             TIVIRRDYLH++ KY+ F KRHRNMSVH SP FR
Sbjct: 79  QRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFR 114



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = +2

Query: 368 VEIGDIVTIGECRPLSKTVRFNVL 439
           VE GDIVTIGECRPLSKTVRFNVL
Sbjct: 116 VEHGDIVTIGECRPLSKTVRFNVL 139


>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
           protein.
          Length = 1188

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 208 SIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHL 348
           S++ RI+    + M+   ++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
           isoform B protein.
          Length = 1188

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 208 SIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHL 348
           S++ RI+    + M+   ++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
           isoform A protein.
          Length = 1188

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 208 SIRGRILTGVVQKMKMXXTIVIRRDYLHYLPKYNXFXKRHRNMSVHL 348
           S++ RI+    + M+   ++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,600,206
Number of Sequences: 53049
Number of extensions: 374791
Number of successful extensions: 705
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)