Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_E13
         (549 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0824 + 20821724-20822137,20822457-20822543,20822729-208228...    28   4.3  
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311...    27   9.9  

>10_08_0824 +
           20821724-20822137,20822457-20822543,20822729-20822829,
           20822917-20822967,20823616-20823790,20823878-20824192,
           20824504-20824707,20824799-20825314,20825400-20825609,
           20826092-20826280,20827254-20827405,20827685-20827837,
           20827925-20828006,20828086-20828475
          Length = 1012

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 151 NYELLKQCNDLPKTEFSXDIEDIINRSKNFS-IPFPIE 261
           NY  L   NDL + E   DIE       +FS +PFPI+
Sbjct: 586 NYPSLSDWNDLNEVEIFEDIERREIEEASFSPLPFPID 623


>05_03_0645 +
           16529635-16529794,16530188-16530312,16531100-16531173,
           16531961-16532006,16532638-16532730,16534429-16535886
          Length = 651

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 121 DWCYPSMSKENYELLKQCNDLPKTEFSXDIED 216
           D C+   SKE +  LK C D+  T  +  +E+
Sbjct: 49  DMCFVDYSKEVHSYLKYCKDVVFTGMTFSLEE 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,638,681
Number of Sequences: 37544
Number of extensions: 223155
Number of successful extensions: 429
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)