Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_E13
         (549 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY954523-1|AAX34431.1|  729|Caenorhabditis elegans anion transpo...    31   0.72 
AY887907-1|AAX34419.1|  729|Caenorhabditis elegans anion transpo...    31   0.72 
AC006625-1|AAK68277.2|  729|Caenorhabditis elegans Sulfate perme...    31   0.72 
AL110485-17|CAB60365.1|  272|Caenorhabditis elegans Hypothetical...    28   5.1  
AL110485-16|CAB60364.1|  295|Caenorhabditis elegans Hypothetical...    28   5.1  
AL022288-4|CAA18365.1|  461|Caenorhabditis elegans Hypothetical ...    27   6.7  

>AY954523-1|AAX34431.1|  729|Caenorhabditis elegans anion
           transporter SULP-1b protein.
          Length = 729

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 11/40 (27%), Positives = 26/40 (65%)
 Frame = +1

Query: 133 PSMSKENYELLKQCNDLPKTEFSXDIEDIINRSKNFSIPF 252
           P+  +++ ELL   N +P+T+F  ++++ +  ++N  +PF
Sbjct: 657 PAFVRDSMELLGFYNTVPRTQFYPNVQEALLSARNTVLPF 696


>AY887907-1|AAX34419.1|  729|Caenorhabditis elegans anion
           transporter SULP-1a protein.
          Length = 729

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 11/40 (27%), Positives = 26/40 (65%)
 Frame = +1

Query: 133 PSMSKENYELLKQCNDLPKTEFSXDIEDIINRSKNFSIPF 252
           P+  +++ ELL   N +P+T+F  ++++ +  ++N  +PF
Sbjct: 657 PAFVRDSMELLGFYNTVPRTQFYPNVQEALLSARNTVLPF 696


>AC006625-1|AAK68277.2|  729|Caenorhabditis elegans Sulfate permease
           family protein 1 protein.
          Length = 729

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 11/40 (27%), Positives = 26/40 (65%)
 Frame = +1

Query: 133 PSMSKENYELLKQCNDLPKTEFSXDIEDIINRSKNFSIPF 252
           P+  +++ ELL   N +P+T+F  ++++ +  ++N  +PF
Sbjct: 657 PAFVRDSMELLGFYNTVPRTQFYPNVQEALLSARNTVLPF 696


>AL110485-17|CAB60365.1|  272|Caenorhabditis elegans Hypothetical
           protein Y46G5A.22b protein.
          Length = 272

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
 Frame = +1

Query: 118 PDWCYPSMSKENYELLKQCNDLPKTEFSXD---------IEDIINRSKNFSIPFPIESVR 270
           P   YPS   E+    ++C+    T  + D         I+DI + ++ + + FP   ++
Sbjct: 24  PTRFYPSEDSESIYSTRKCSKRTTTTATTDEEKPNNSYYIDDIYDSTEEYQVTFPTVELK 83

Query: 271 LDKLKKH 291
           L + +KH
Sbjct: 84  LPRQRKH 90


>AL110485-16|CAB60364.1|  295|Caenorhabditis elegans Hypothetical
           protein Y46G5A.22a protein.
          Length = 295

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
 Frame = +1

Query: 118 PDWCYPSMSKENYELLKQCNDLPKTEFSXD---------IEDIINRSKNFSIPFPIESVR 270
           P   YPS   E+    ++C+    T  + D         I+DI + ++ + + FP   ++
Sbjct: 24  PTRFYPSEDSESIYSTRKCSKRTTTTATTDEEKPNNSYYIDDIYDSTEEYQVTFPTVELK 83

Query: 271 LDKLKKH 291
           L + +KH
Sbjct: 84  LPRQRKH 90


>AL022288-4|CAA18365.1|  461|Caenorhabditis elegans Hypothetical
           protein ZK1025.7 protein.
          Length = 461

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 259 ESVRLDKLKKHRPIDXLXRNISGTYPIIHERILMLMTHFLL 381
           E + L +L+    I  L  NIS  YP + E + ++ TH  L
Sbjct: 208 EKLGLIELRPWPNIGELSSNISPMYPKVDESVFIIATHMAL 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,519,144
Number of Sequences: 27780
Number of extensions: 218876
Number of successful extensions: 451
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)