Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_E12
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81131-3|CAB03424.1| 438|Caenorhabditis elegans Hypothetical pr... 61 6e-10
AC084197-5|AAO38574.1| 335|Caenorhabditis elegans Serpentine re... 33 0.13
AC084197-4|AAO38575.1| 335|Caenorhabditis elegans Serpentine re... 32 0.41
AF016419-8|AAG24053.1| 293|Caenorhabditis elegans Serpentine re... 30 1.2
Z81449-6|CAB03764.2| 489|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81449-5|CAB03762.2| 488|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine re... 29 2.9
AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical... 28 5.0
AF022971-11|AAZ32813.1| 265|Caenorhabditis elegans Hypothetical... 28 5.0
U56963-11|AAB38127.1| 342|Caenorhabditis elegans Serpentine rec... 28 6.7
AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical ... 28 6.7
AF125442-5|AAD12795.1| 314|Caenorhabditis elegans Serpentine re... 27 8.8
>Z81131-3|CAB03424.1| 438|Caenorhabditis elegans Hypothetical
protein T24D1.4 protein.
Length = 438
Score = 61.3 bits (142), Expect = 6e-10
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Frame = +2
Query: 242 HHTTRTVIDELFHIPQGLSYCRRNFVHWDPKITTLPGLYLVSAAFLGTYFPCTTYNLRFI 421
H+ +DE+FHI Q SYC N+ W+P ITT P LY++S G L F
Sbjct: 41 HYVPEPYMDEIFHITQTRSYCSGNY-SWNPLITTPPALYVISMPLCGGNERYANSILLFF 99
Query: 422 NLLASCVNLLLFASI----LKFVY--TSKQSKIVIQALNLTLLPPLYFFSHVYYTDTLSL 583
+ A C +F + LK T Q + + A + +LP L S ++YTD LSL
Sbjct: 100 AIPAFCRFRRMFVRVRIPTLKIYLKNTDLQQDVWLTASIVGMLPILISSSILFYTDLLSL 159
Query: 584 TFLL 595
T ++
Sbjct: 160 TSVI 163
>AC084197-5|AAO38574.1| 335|Caenorhabditis elegans Serpentine
receptor, class v protein26 protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 386 YFPCTTYNLRFINLLASCVNLLLFASILKFVYTSKQSKIVIQ 511
Y TYN+ +++L C+ +LL + FV TS S + I+
Sbjct: 88 YIAAATYNIIYVSLYIRCIGILLLSLQRYFVITSPHSNLTIK 129
>AC084197-4|AAO38575.1| 335|Caenorhabditis elegans Serpentine
receptor, class v protein27 protein.
Length = 335
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 386 YFPCTTYNLRFINLLASCVNLLLFASILKFVYTSKQSKIVIQ 511
Y TYN+ +++L C ++L + V TS SKI I+
Sbjct: 88 YIAAATYNIIYVSLYIRCTGIILLSLQRYLVITSPHSKIAIK 129
>AF016419-8|AAG24053.1| 293|Caenorhabditis elegans Serpentine
receptor, class x protein6 protein.
Length = 293
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +2
Query: 419 INLLASCVNLLLFASILKFVYTSKQSKIVIQALNLTLLPPLYFFSHVYYTDTLSLTF 589
++ ++ C+NLL+F + +F + K+S I + A + L F +++ +LS+ F
Sbjct: 14 LSFVSICLNLLIFIPVFRFAFFGKKSSIYLIAFFNIISDLLQLFVACFHS-SLSIIF 69
>Z81449-6|CAB03764.2| 489|Caenorhabditis elegans Hypothetical
protein C46F11.5b protein.
Length = 489
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 349 WP---IFSICSVLGNVFSLHNLQSKVYQLAGFVREPLIVCLYI 468
WP IF SV G+V+S+H L+++ +LA + + CL +
Sbjct: 82 WPFQSIFRTLSVGGSVYSIHLLRAEQVRLACYAAYATLACLLV 124
>Z81449-5|CAB03762.2| 488|Caenorhabditis elegans Hypothetical
protein C46F11.5a protein.
Length = 488
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 349 WP---IFSICSVLGNVFSLHNLQSKVYQLAGFVREPLIVCLYI 468
WP IF SV G+V+S+H L+++ +LA + + CL +
Sbjct: 82 WPFQSIFRTLSVGGSVYSIHLLRAEQVRLACYAAYATLACLLV 124
>AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine
receptor, class x protein5 protein.
Length = 306
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +2
Query: 419 INLLASCVNLLLFASILKFVYTSKQSKIVIQALNLTLLPPLYFFSHVYYTDTLSLTF 589
++ ++ C+NLL+F + +F + K+S I + A ++ L + +LS+ F
Sbjct: 14 LSFVSICLNLLIFIPVFRFAFFGKRSSIYLIAF-FNIISDLQQLFVACFHSSLSIIF 69
>AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical
protein C31B8.1 protein.
Length = 229
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 503 VIQALNLTLLPPLYFFSHVYYTDTLSLTFLLAFSRLCLTNRHGFLMLVF 649
++ +L +L PL F ++ DT+ ++FL + S T+ MLVF
Sbjct: 141 IMISLPFFILSPLLIFLKIFLNDTVDVSFLTSISFAVFTSAPIPSMLVF 189
>AF022971-11|AAZ32813.1| 265|Caenorhabditis elegans Hypothetical
protein C31B8.16 protein.
Length = 265
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 403 LQSKVYQLAGFVREPLIVCLYIKICVYK*AIENRDSSTEFNVASTVVFLFTRILHRYIIS 582
LQ+ Y+L F E L++ +++K+C I DS FN++ ++F F I+ + I
Sbjct: 42 LQAFTYKLFLFQYEVLVLMMFVKLC----RIARPDSI--FNLSLPIIFGFALIILTFNIL 95
Query: 583 DVSV 594
S+
Sbjct: 96 PTSI 99
>U56963-11|AAB38127.1| 342|Caenorhabditis elegans Serpentine
receptor, class v protein32 protein.
Length = 342
Score = 27.9 bits (59), Expect = 6.7
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +2
Query: 314 FVHWDPKITTLPGLYLVSAAFLGTYFPCTTYNLRFIN-LLASCVNLLLFASILKFVYTSK 490
FV + I +LP LV A L TYN F + LL C+ LL A ++ FV
Sbjct: 13 FVFYGMSIVSLPLYILVFACLLRLRCVSNTYNTTFYSILLQHCIADLL-AMLVFFV---- 67
Query: 491 QSKIVIQALNLTLLPPLYFFSHVYYTDTLSLTFLLAF 601
+ A + + L YF YY S + F
Sbjct: 68 ----AVDARSYSFLKEFYFEYQHYYVAAASYNNIYYF 100
>AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical
protein Y92H12A.5 protein.
Length = 1375
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 455 FASILKFVYTSKQSKIVIQALNLTLLPPLYFFSHVY 562
F ++ KF+Y S+ Q +LLPPL SH+Y
Sbjct: 917 FPTLYKFLYDQLTSE---QQSEFSLLPPLVVLSHLY 949
>AF125442-5|AAD12795.1| 314|Caenorhabditis elegans Serpentine
receptor, class v protein22 protein.
Length = 314
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +2
Query: 383 TYFPCTTYNLRFINLLASCVNLLLFASILKFVYTSKQS--KIVIQALNLTLLPPLYFFSH 556
+Y CTT L ++ + ++++ I+KF+ + QS K + + L L F +
Sbjct: 186 SYISCTTRTLSVFVSISCVICIVIYGLIVKFIRENSQSATKTFRREIRLACQVSLSFAAQ 245
Query: 557 VYYTDTLSLTFLLA--FSRLCLTNRHGFLMLVFG 652
+ L +F+ A + + N FL L +G
Sbjct: 246 LISMIYLFSSFIFAETGNTAQIVNLRRFLPLAYG 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,020,690
Number of Sequences: 27780
Number of extensions: 315217
Number of successful extensions: 690
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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