Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_E07
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.8  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   4.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.6  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 481 IHNMYLFVXKVYGICGHVDILXNNGGVTHXGSILNTKTD 597
           +HN+Y  +  VY IC  + +  N   +   G +   K+D
Sbjct: 18  LHNIYTSMKPVYAICKLIGL--NTLRIGRKGELKQHKSD 54


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 481 IHNMYLFVXKVYGICGHVDILXNNGGVTHXGSILNTKTD 597
           +HN+Y  +  VY IC  + +  N   +   G +   K+D
Sbjct: 18  LHNIYTSMKPVYAICKLIGL--NTLRIGRKGELKQHKSD 54


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 196 YIGVPFVVGVTMYGV-INHLLQKKRRSTL 279
           Y G P  VGVTMY + I+ L + K   TL
Sbjct: 60  YGGPPVEVGVTMYVLSISSLSEVKMDFTL 88


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 125 LYLLYYFCICS 93
           L+LL+ FC CS
Sbjct: 293 LFLLFVFCDCS 303


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 125 LYLLYYFCICS 93
           L+LL+ FC CS
Sbjct: 293 LFLLFVFCDCS 303


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 125 LYLLYYFCICS 93
           L+LL+ FC CS
Sbjct: 293 LFLLFVFCDCS 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,221
Number of Sequences: 336
Number of extensions: 3409
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)