Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_E07
(636 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 49 5e-07
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 44 2e-05
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 40 4e-04
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 39 7e-04
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 37 0.003
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 34 0.015
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 34 0.020
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 33 0.026
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 33 0.046
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 31 0.11
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 31 0.11
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 31 0.14
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 30 0.24
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 29 0.74
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 29 0.74
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 29 0.74
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 26 5.2
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 6.9
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 25 6.9
SPBC1198.02 |dea2||adenine deaminase Dea2|Schizosaccharomyces po... 25 6.9
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 49.2 bits (112), Expect = 5e-07
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +1
Query: 271 STLXGKVVLITGASSGIGEALA-HVFYGQGCKIILASRRKRXLERVKXDLISXKVAIQTL 447
S L GK +LITGASSGIG++ A + K+ILA+RR +E + +L S K + L
Sbjct: 2 SRLDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELES-KYEVSVL 60
Query: 448 EPVVLELNLXDIHNMYLFVXKVYGICGHVDILXNNGGV 561
L+L++ D+ ++ + + +D+L NN G+
Sbjct: 61 P---LKLDVSDLKSIPGVIESLPKEFADIDVLINNAGL 95
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 43.6 bits (98), Expect = 2e-05
Identities = 30/95 (31%), Positives = 44/95 (46%)
Frame = +1
Query: 277 LXGKVVLITGASSGIGEALAHVFYGQGCKIILASRRKRXLERVKXDLISXKVAIQTLEPV 456
L GKV L+TG+S GIG A +G K+ LA R + ++V I +V +
Sbjct: 40 LTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQ-IHDEVRHSKIR-- 96
Query: 457 VLELNLXDIHNMYLFVXKVYGICGHVDILXNNGGV 561
L L+L D ++Y + IL NN G+
Sbjct: 97 FLRLDLLDFESVYQAAESFIAKEEKLHILVNNAGI 131
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 39.5 bits (88), Expect = 4e-04
Identities = 31/114 (27%), Positives = 52/114 (45%)
Frame = +1
Query: 292 VLITGASSGIGEALAHVFYGQGCKIILASRRKRXLERVKXDLISXKVAIQTLEPVVLELN 471
VLITG+S G+G AL V QG +I SR + I+ + + L+L+
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIACSR------------APDTITIEHSKLLKLKLD 55
Query: 472 LXDIHNMYLFVXKVYGICGHVDILXNNGGVTHXGSILNTKTDVDXKIMFINYFG 633
+ D+ ++ G+VDI+ NN G G + + + M +N++G
Sbjct: 56 VTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWG 109
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 38.7 bits (86), Expect = 7e-04
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +1
Query: 286 KVVLITGASSG-IGEALAHVFYGQGCKIILASRRKRXLERVKXDLISXKVAIQTLEPVVL 462
K VLITG S G IG ALA F+ +G +++ +R+ ++ + K +QTL+ V
Sbjct: 5 KFVLITGCSEGGIGNALALKFHQEGFQVLATARQVERMDNL------TKAGLQTLKLDVT 58
Query: 463 ELNLXDIHNMYLFVXKVYGICGHVDILXNNGGVTHXGSILNTKTDVDXKIMFINYFG 633
+ + + + V K G + L NN G ++ + K+M +N++G
Sbjct: 59 DED--SVREVEQEVRKFTN--GSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYG 111
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 274 TLXGKVVLITGASSGIGEALAHVFYGQGCKI-ILASRRKRXLE 399
+L GK LITG S GIG ++A F G + +L R K+ LE
Sbjct: 6 SLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALE 48
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 34.3 bits (75), Expect = 0.015
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 286 KVVLITGASSGIGEALAHVFYGQGCKIILASRRKRXLERVKXDLISXKVAIQTLEPVVLE 465
K+ I G + GIG +L + ++ AS RK +L + + +++
Sbjct: 6 KIYFIAGGNRGIGLSLVKELSNREGTVVFASARK---PEAATELQEWSKSHSNVH--IIK 60
Query: 466 LNLXDIHNMYLFVXKVYGICGHVDILXNNGGVTH-XGSILNTKTDV 600
L++ + + +V G VD+L N G+ H ++LNT DV
Sbjct: 61 LDISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDV 106
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 33.9 bits (74), Expect = 0.020
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 274 TLXGKVVLITGASSGIGEALAHVFYGQGCKI 366
T+ G+VVLITGA+ GIG+ L +F G ++
Sbjct: 2 TVEGRVVLITGAAGGIGKVLCKMFTELGDRV 32
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 33.5 bits (73), Expect = 0.026
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +1
Query: 199 IGVPFVVGVTMYGVINHLLQKKRRSTLXGKVVLITGASSGIGEALAHVFYGQGCKIILAS 378
+GVPF T Y L R T +VL+ GA +G A+ + GCK+I S
Sbjct: 130 VGVPFT---TAY------LALSRGETKGSDIVLVVGALGAVGSAVCQIAEDWGCKVITVS 180
Query: 379 R 381
R
Sbjct: 181 R 181
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 32.7 bits (71), Expect = 0.046
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 2/120 (1%)
Frame = +1
Query: 283 GKVVLITGASSGIGEALAHVFYGQGCKIILASRRKRXLERVKXDLISXKVAIQTLEPVVL 462
G ++TGA+ GIG+ A G ++L SR + L+ + +L VA + +
Sbjct: 57 GYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKEL--ETVAKVKTRTIAI 114
Query: 463 ELNLXDIHNMYLFVXKVYGICGHVDILXNNGGVTH--XGSILNTKTDVDXKIMFINYFGS 636
+ + G + +L NN G +H S T IM IN FG+
Sbjct: 115 DYTKTTAETFEKLHQDLVGT--PITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFGT 172
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 31.5 bits (68), Expect = 0.11
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 292 VLITGASSGIGEALAHVFYGQGCKIILASRRKRXLERVKXDLISXKV 432
+L+TG S G+G+A+A +G + + +R L+ +L K+
Sbjct: 25 ILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKI 71
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 31.5 bits (68), Expect = 0.11
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 277 LXGKVVLITGASSGIGEALAHVFYGQGCKIILASR 381
+ G VV++TG SSGIG+ + G ++++ R
Sbjct: 73 MNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLR 107
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 31.1 bits (67), Expect = 0.14
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +1
Query: 292 VLITGASSGIGEALAHVFYGQGCKIILASRRKRXLERVKXDLISXKVAIQTLEPVVLELN 471
VLITG SSG+G+ +A ++ +G + + R + L+ L K TL ++ +
Sbjct: 4 VLITGGSSGLGKRIAQIWSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSD 63
Query: 472 LXDIHNMY 495
+ ++ +++
Sbjct: 64 MKNLKSIF 71
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 30.3 bits (65), Expect = 0.24
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 277 LXGKVVLITGASSGIGEALAHVFYGQGCKIILAS-RRKRXLERVKXDLI 420
L K L+TG SGIG+A A +F +G ++++ +R V DLI
Sbjct: 40 LAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLI 88
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 28.7 bits (61), Expect = 0.74
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +1
Query: 427 KVAIQTLEPVVLELNLXDIHNMYLFVXKVYGICGHVDILXNNGGVTHXGSILNTKTDVDX 606
KV + +V +L++ + ++ V K G +D+L NN G + + +T +
Sbjct: 8 KVLSRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIH 67
Query: 607 KIMFINYFGS 636
I N FG+
Sbjct: 68 NIFNTNVFGA 77
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 28.7 bits (61), Expect = 0.74
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 286 KVVLITGASSGIGEALAHVFYGQGCKIILASR 381
KV+L+TG+S GIG A A + K+I SR
Sbjct: 7 KVILLTGSSKGIGLATAEALQ-KKAKVIAVSR 37
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 28.7 bits (61), Expect = 0.74
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +1
Query: 427 KVAIQTLEPVVLELNLXDIHNMYLFVXKVYGICGHVDILXNNGGVTHXGSILNTKTDVDX 606
KV + +V +L++ + ++ V K G +D+L NN G + + +T +
Sbjct: 8 KVLSRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIH 67
Query: 607 KIMFINYFGS 636
I N FG+
Sbjct: 68 NIFNTNVFGA 77
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 25.8 bits (54), Expect = 5.2
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = +1
Query: 142 ICLKMNSLMKLQQKNWYTYIGVPFV 216
+C K + L++ NW+T + + +V
Sbjct: 13 VCFKQEDVDSLKKPNWFTDVSIDYV 37
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 25.4 bits (53), Expect = 6.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 152 FRQI*MEKTLYLLYYFCICSDNKI 81
FR + T+Y+ YYF + SD K+
Sbjct: 8 FRWAFLIATVYVAYYFLVSSDKKL 31
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 25.4 bits (53), Expect = 6.9
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = +1
Query: 151 KMNSLMKLQQKNWYTYIGVPFVVGVTMYGVINHLLQKKRRSTLXGKVVLITGASSGIGEA 330
K N K++ KN + +GV +HLL K T+ + +I S ++
Sbjct: 38 KNNKTQKVEPKNAFKVENQSNDIGVDTVDAFDHLLLDKTLPTIDAETEVIKNTSLSNSKS 97
Query: 331 LAH 339
H
Sbjct: 98 FLH 100
>SPBC1198.02 |dea2||adenine deaminase Dea2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 6.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 47 LPIYNLI*KIPKFYYH 94
LPIYN I K+PK +H
Sbjct: 4 LPIYNFIRKLPKCEHH 19
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,532,706
Number of Sequences: 5004
Number of extensions: 50604
Number of successful extensions: 116
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -