Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_E04
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006608-6|AAF39753.1| 308|Caenorhabditis elegans Steroid alpha... 174 5e-44
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 34 0.077
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 32 0.31
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z71178-13|CAF31498.1| 342|Caenorhabditis elegans Hypothetical p... 29 2.9
Z71178-11|CAA94885.2| 309|Caenorhabditis elegans Hypothetical p... 29 2.9
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81119-1|CAB03331.1| 363|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical... 28 6.7
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 27 8.8
>AC006608-6|AAF39753.1| 308|Caenorhabditis elegans Steroid alpha
reductase familyprotein 1 protein.
Length = 308
Score = 174 bits (423), Expect = 5e-44
Identities = 82/166 (49%), Positives = 109/166 (65%), Gaps = 3/166 (1%)
Frame = +3
Query: 141 VTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSK-LFLKD 317
++G +IK +K++I Q K L +RQAL++E KGK L D+ L+ L + L+++D
Sbjct: 23 ISGSETIKAIKKRIAQK-KLKLTEERQALRVEPKGKPLADDQKLSDLGLSSQKAVLYVRD 81
Query: 318 LGPQVSWRNVFLAEYAGPLFVYLWVYQRPWILYGTQT--SSPEQVATVAAICWSAHYAKR 491
LGPQ++W+ VF+AEYAGPLFVY Y RP +YG ++ +A WS HYAKR
Sbjct: 82 LGPQIAWKTVFMAEYAGPLFVYPLFYLRPTFIYGQAAVNATMHPAVQIAFFAWSFHYAKR 141
Query: 492 LFETLFIHRFSHGTMPLKNLFXNCAYYWLFXLYVAYHVNHPLYTAP 629
LFET FIHRF + TMP NL NC+YYW F +VAY VNHPL+T P
Sbjct: 142 LFETQFIHRFGNSTMPQFNLVKNCSYYWGFAAFVAYFVNHPLFTPP 187
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 34.3 bits (75), Expect = 0.077
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 132 KIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 311
K+ V G +I+++K +I K + R L+ GK L+D +L NIQ+G+ ++L
Sbjct: 209 KLRVCGSDTIRHIKLRINSLAKVDISSFRMVLR----GKLLEDHHSLAYYNIQEGALIWL 264
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 90 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 263
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 264 DTLNSLNIQDGSKLFL 311
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 90 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 263
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 264 DTLNSLNIQDGSKLFL 311
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 90 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 263
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 264 DTLNSLNIQDGSKLFL 311
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 90 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 263
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 264 DTLNSLNIQDGSKLFL 311
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 90 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 263
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 264 DTLNSLNIQDGSKLFL 311
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 90 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 263
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 264 DTLNSLNIQDGSKLFL 311
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 90 EIEILSVSSAKPLGK--IHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE 263
E ++ V P K + + ++S+ +K+K+ V + +++ + + GK LKDE
Sbjct: 4 ESALIKVHVKSPSNKYDVEIAADASVSELKDKVLVFVPTA---NKEQVCIIYTGKILKDE 60
Query: 264 DTLNSLNIQDGSKLFL 311
+TL I DG + L
Sbjct: 61 ETLTQHKIADGHTVHL 76
>Z71178-13|CAF31498.1| 342|Caenorhabditis elegans Hypothetical
protein B0024.13b protein.
Length = 342
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 453 VAAICWSAHYAKRLFETLFIHRFSHGTMPLKNLFXNCAYYWLFXLYV 593
+A + S H A+RL+ET+F+ +S M L + +Y + + +
Sbjct: 157 LALLLISLHVARRLYETIFVSVYSDSRMNLFHYAVGIVHYIILPISI 203
>Z71178-11|CAA94885.2| 309|Caenorhabditis elegans Hypothetical
protein B0024.13a protein.
Length = 309
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 453 VAAICWSAHYAKRLFETLFIHRFSHGTMPLKNLFXNCAYYWLFXLYV 593
+A + S H A+RL+ET+F+ +S M L + +Y + + +
Sbjct: 124 LALLLISLHVARRLYETIFVSVYSDSRMNLFHYAVGIVHYIILPISI 170
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 141 VTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDEDTLNSLNIQDGSKLFL 311
V G +I+ VK I + R L+ K L+D+ TL NIQ+GS L L
Sbjct: 189 VRGSDTIRQVKLTINSLANVDISSFRMVLR----DKVLEDDHTLAYYNIQEGSTLGL 241
>Z81119-1|CAB03331.1| 363|Caenorhabditis elegans Hypothetical
protein T10H4.2 protein.
Length = 363
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -2
Query: 221 LTIWV*RF--LHALLDFFFYILYRTFTCNVNLAERFRARYAQNFNLHIV 81
+TIW + + +LL F+ Y + T + L +RF RY + L+I+
Sbjct: 95 VTIWCSFYAMMLSLLSIHFFYRYTSVTAPILLMKRFSCRYIFKYTLYIL 143
>AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical
protein Y17G7B.9 protein.
Length = 483
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +3
Query: 141 VTGESSIKNVKEKIQQSVKKSLYPDRQALKLEAKGKTLKDE------DTLNSLN--IQDG 296
V ESSI +++EK+ + +K ++ + E K ++DE +T++ +N ++D
Sbjct: 263 VKDESSISSIREKLMKKSQKRKLEEKAGGEDEDYEKMIEDERNAKERETIDKMNSELKDM 322
Query: 297 SKLFLKDLGP 326
K ++K L P
Sbjct: 323 QKEYMKALRP 332
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -3
Query: 373 SGPAYSAKNTFRQDT*GPRSFKKSLDP--S*ILREFRVSSSFNVLPLASSLRA 221
S A S K T RQ GPRS K DP S ++REF S +V +S A
Sbjct: 111 SPAASSEKLTGRQTGMGPRSMSKLADPNESRMVREFSNLSQSSVASSRASASA 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,721,935
Number of Sequences: 27780
Number of extensions: 283552
Number of successful extensions: 721
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -