Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_D23
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0158 - 1103461-1104186                                           66   2e-11
08_01_0202 - 1638978-1639571                                           64   7e-11
04_04_1386 - 33166470-33166705,33166811-33167087,33167240-331675...    31   1.1  
06_01_0096 - 794148-794246,795682-796975,798960-799417                 30   1.4  
03_06_0609 - 35042276-35042388,35042476-35042527,35042624-350427...    30   1.4  
02_04_0148 - 20198407-20201424                                         28   5.6  
03_05_0433 - 24245560-24245946                                         28   7.5  
02_03_0167 - 15923872-15925683                                         28   7.5  

>02_01_0158 - 1103461-1104186
          Length = 241

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = +2

Query: 206 AXKVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVA 385
           A +  GTVKWFN   G+GFI+ +D  ED+FVHQ++I  +      RS+ +GE VEFA+  
Sbjct: 4   AARHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKAD----GFRSLAEGEQVEFAISE 59

Query: 386 GEKG-FEAAGVTGP 424
            E G  +A  VTGP
Sbjct: 60  SEDGRTKAVDVTGP 73


>08_01_0202 - 1638978-1639571
          Length = 197

 Score = 64.5 bits (150), Expect = 7e-11
 Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +2

Query: 212 KVSGTVKWFNVKSGYGFINRNDTXEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGE 391
           +V GTVKWF+   G+GFI  +D  ED+FVHQ+++  +      RS+ DG+ VEF+V +G 
Sbjct: 5   RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSD----GYRSLNDGDVVEFSVGSGN 60

Query: 392 KG-FEAAGVTGP 424
            G  +A  VT P
Sbjct: 61  DGRTKAVDVTAP 72


>04_04_1386 -
           33166470-33166705,33166811-33167087,33167240-33167508,
           33167658-33167882,33168020-33168080
          Length = 355

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 493 GNIGGGSHGACLQHKVSLL-LAHHRTSNTSCFKAFLPGNHGKLHRLS 356
           GN+G   HG+ LQ K+S L   HH   NT+ F   +  + G  H++S
Sbjct: 239 GNMGAYLHGSNLQQKLSHLDYVHHVDLNTA-FSNIVNPDQGSKHKVS 284


>06_01_0096 - 794148-794246,795682-796975,798960-799417
          Length = 616

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -1

Query: 578 PLGWAGVH-DVXILLCVELXHRXVRHLERGKY 486
           PLGW+G+   + IL+   +  +   HL+RG+Y
Sbjct: 171 PLGWSGLSWAIGILIAAPILTQAAHHLDRGQY 202


>03_06_0609 -
           35042276-35042388,35042476-35042527,35042624-35042725,
           35043546-35043745,35045258-35045336,35045541-35045595,
           35045947-35046122,35046386-35046988,35047077-35047265,
           35048150-35048201,35048289-35048356,35048873-35048911,
           35048912-35048970,35049639-35049782,35050136-35050238,
           35050368-35050467,35050596-35050612
          Length = 716

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -2

Query: 427 HRTSNTSCFKAFLPGNHGKLHRLSVADRAHSLTWVVTGDGSLMHK 293
           H T N   ++ FLP   G +  L + D   ++ W ++ + SL HK
Sbjct: 291 HITENDCAWQRFLPS--GPIALLPIGDNYSNIVWTMSPEESLRHK 333


>02_04_0148 - 20198407-20201424
          Length = 1005

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 21   RRKAVNIEEKVVEYFTIFATIA 86
            RRK +++EEK+VEY T   T+A
Sbjct: 981  RRKGLHVEEKIVEYGTKQRTLA 1002


>03_05_0433 - 24245560-24245946
          Length = 128

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 448 VSLLLAHHRTSNTSCFKAFLPGNHGKLHRLSVADRAHSLTWVVTGDGS 305
           V+  L  H  SN +  + F   +  ++ RLS+   A  + W +TGDGS
Sbjct: 32  VAQALVQHTLSNEAIGEFFHIWD--EVQRLSLTSEADRIKWKLTGDGS 77


>02_03_0167 - 15923872-15925683
          Length = 603

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 478 GSHGACLQHKVSLLLAHHRTSNTSCFKAFLPGNHG-KLHRLSVADRAHSL 332
           GS+  CL+H  SLL A       S F +        +L RL  A  AH+L
Sbjct: 30  GSYSRCLRHYASLLAAGLGGGGASTFPSLAKSCAALRLPRLGAAVHAHAL 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,756,668
Number of Sequences: 37544
Number of extensions: 290398
Number of successful extensions: 876
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)