Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_D21
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 297 9e-82
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 297 1e-81
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 297 1e-81
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 167 1e-42
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 165 6e-42
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 98 8e-22
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 4e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 44 2e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 40 3e-04
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 35 0.009
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.015
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 32 0.062
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 32 0.062
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.25
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.33
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.44
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.44
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 1.8
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 3.1
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 3.1
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 25 7.2
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 9.5
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 297 bits (729), Expect = 9e-82
Identities = 140/169 (82%), Positives = 153/169 (90%)
Frame = +1
Query: 142 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 321
HLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKY 85
Query: 322 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 501
VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTREHALLA+TLGV
Sbjct: 86 NVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGV 145
Query: 502 KQLIVGVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYNPAAVAFVPIS 648
KQLIV VNKMD+T +S+ RFEEI E S++IKK+G+NP V FVP+S
Sbjct: 146 KQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVS 192
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3
Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGSL 146
MGKEK HIN+VVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHL 27
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 297 bits (728), Expect = 1e-81
Identities = 139/169 (82%), Positives = 153/169 (90%)
Frame = +1
Query: 142 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 321
HLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKY 85
Query: 322 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 501
VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGV
Sbjct: 86 NVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGV 145
Query: 502 KQLIVGVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYNPAAVAFVPIS 648
KQLIV VNKMD+T +S+ RFEEI E S++IKK+G+NP V FVP+S
Sbjct: 146 KQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVS 192
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3
Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGSL 146
MGKEK HIN+VVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHL 27
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 297 bits (728), Expect = 1e-81
Identities = 139/169 (82%), Positives = 153/169 (90%)
Frame = +1
Query: 142 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 321
HLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKY 85
Query: 322 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 501
VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGV
Sbjct: 86 NVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGV 145
Query: 502 KQLIVGVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYNPAAVAFVPIS 648
KQLIV VNKMD+T +S+ RFEEI E S++IKK+G+NP V FVP+S
Sbjct: 146 KQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVS 192
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3
Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGSL 146
MGKEK HIN+VVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHL 27
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 167 bits (406), Expect = 1e-42
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 1/169 (0%)
Frame = +1
Query: 145 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYY 324
++++ G I+ R+++K EA GKGSF YAW+LD + ER RG+T+D+A FE+ K
Sbjct: 197 IMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKI 256
Query: 325 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 504
I DAPGHRDFI MI G S AD AVL+V + FE G +NGQTREHA L LG+
Sbjct: 257 YEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGIS 316
Query: 505 QLIVGVNKMDSTEPPYSEPRFEEIKXEVSSY-IKKIGYNPAAVAFVPIS 648
+++V VNK+D +SE RF+EIK VS + IK +G+ + V FVPIS
Sbjct: 317 EIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPIS 363
Score = 31.5 bits (68), Expect = 0.11
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 78 KTHINIVVIGHVDSGKSTTTGSLDLQM 158
K +++VV GHVDSGKST G + ++
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFEL 201
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 165 bits (400), Expect = 6e-42
Identities = 75/171 (43%), Positives = 116/171 (67%), Gaps = 2/171 (1%)
Frame = +1
Query: 142 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 321
++++ G +DKRT+EK E+EA+E GK S+ +W LD ERE+G T+++ FET
Sbjct: 257 NILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHR 316
Query: 322 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 501
+++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQTREHA+LA T G+
Sbjct: 317 RFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGI 376
Query: 502 KQLIVGVNKMDSTEPPYSEPRFEEIKXEVSSYIKKI-GYNPAA-VAFVPIS 648
L+V +NKMD +SE R++E ++S +++++ GYN V ++P+S
Sbjct: 377 NHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVS 427
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 78 KTHINIVVIGHVDSGKSTTTGSL 146
K H+NIV IGHVD+GKST G++
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNI 258
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 98.3 bits (234), Expect = 8e-22
Identities = 53/130 (40%), Positives = 78/130 (60%)
Frame = +1
Query: 208 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 387
++G+ SF +DK E+ RGITI A ++ET+ + +D PGH D+IKNMITG +
Sbjct: 79 DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138
Query: 388 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 567
D A+++V+A G+ QTREH LLA +GVKQ++V +NK+D EP E
Sbjct: 139 TMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVE 191
Query: 568 EEIKXEVSSY 597
E++ +S Y
Sbjct: 192 MEMRELLSEY 201
Score = 34.7 bits (76), Expect = 0.012
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 72 KEKTHINIVVIGHVDSGKSTTTGSL 146
++K H+NI IGHVD GK+T T ++
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTAAI 73
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.6 bits (113), Expect = 4e-07
Identities = 36/98 (36%), Positives = 50/98 (51%)
Frame = +1
Query: 241 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 420
V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-- 124
Query: 421 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 534
+ AG+ QT+ A G+ ++I VNKMD
Sbjct: 125 ---DGSAGV--EAQTKVVWKQATKRGIPKVIF-VNKMD 156
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 90 NIVVIGHVDSGKSTTT 137
N+ +I H+D+GK+T T
Sbjct: 30 NVGIIAHIDAGKTTLT 45
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 244 LDKLKAERERGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 411
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 412 VAAGTG 429
V A G
Sbjct: 155 VDASQG 160
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +1
Query: 322 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 501
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 502 KQLIVGVNKMDSTEPPYSEPRFEEI 576
K +I+ NK+D +E ++ I
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSI 187
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 60 PKMGKEKTHINIVVIGHVDSGKSTTTGSL 146
P + + INI IGHV GKST ++
Sbjct: 15 PAIISRQATINIGTIGHVAHGKSTVVKAI 43
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 35.1 bits (77), Expect = 0.009
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +1
Query: 214 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 387
GK + A+ + + GIT I + F+ ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 388 QADCAVLIVAAGTG 429
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.015
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Frame = +1
Query: 244 LDKLKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDFIK 366
+D ++ ERE+GITI A W+ FE S Y + IID PGH DF
Sbjct: 102 MDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTI 160
Query: 367 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 474
+ D AVL++ A +G I+ + Q R +
Sbjct: 161 EVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 32.3 bits (70), Expect = 0.062
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGSL 146
MGK N+ VI HVD GKST T SL
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSL 39
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 319 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 414
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 32.3 bits (70), Expect = 0.062
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3
Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGSL 146
MGK N+ VI HVD GKST T SL
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSL 39
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 319 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 414
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.25
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 319 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 429
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.33
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 247 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 369
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.5 bits (63), Expect = 0.44
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 284 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 156
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.44
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 331 IIDAPGHRDFIKNMITGTSQADCAVLIV 414
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 262 ERERGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 414
ERER ++I +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 185 ERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 308 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 177
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 3.1
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Frame = -2
Query: 274 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVC-----QYHHICRSSXPVVVDLPE 116
H+H PL P+P +L P P P S WY H S PV+ +LP+
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPK 191
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 551 TVSPDLRKSRXKYPHTSRRLATTQLLSLSC 640
+ +PD+ ++PHT +R +T + L + C
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRC 174
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 208 PGPPSRTSRWYVCQYHHIC 152
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,607,780
Number of Sequences: 5004
Number of extensions: 51049
Number of successful extensions: 193
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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