Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_D21
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 349 1e-98
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 338 3e-95
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 281 5e-78
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 248 5e-68
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 6e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.4
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 22 4.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 349 bits (859), Expect = 1e-98
Identities = 167/169 (98%), Positives = 167/169 (98%)
Frame = +1
Query: 142 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 321
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 85
Query: 322 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 501
YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV
Sbjct: 86 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 145
Query: 502 KQLIVGVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYNPAAVAFVPIS 648
KQLIVGVNKMDSTEPPYSE RFEEIK EVSSYIKKIGYNPAAVAFVPIS
Sbjct: 146 KQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 194
Score = 54.8 bits (126), Expect = 7e-10
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +3
Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGSL 146
MGKEK HINIVVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHL 27
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 338 bits (831), Expect = 3e-95
Identities = 161/169 (95%), Positives = 164/169 (97%)
Frame = +1
Query: 142 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 321
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 322 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 501
YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGV
Sbjct: 86 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGV 145
Query: 502 KQLIVGVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYNPAAVAFVPIS 648
KQLIVGVNKMD T+PPYSE RFEEIK EVSSYIKKIGYN A+VAFVPIS
Sbjct: 146 KQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPIS 194
Score = 54.8 bits (126), Expect = 7e-10
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +3
Query: 66 MGKEKTHINIVVIGHVDSGKSTTTGSL 146
MGKEK HINIVVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHL 27
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 281 bits (688), Expect = 5e-78
Identities = 135/137 (98%), Positives = 135/137 (98%)
Frame = +1
Query: 238 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 417
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 418 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKXEVSSY 597
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIK EVSSY
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 598 IKKIGYNPAAVAFVPIS 648
IKKIGYNPAAVAFVPIS
Sbjct: 121 IKKIGYNPAAVAFVPIS 137
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 248 bits (606), Expect = 5e-68
Identities = 119/121 (98%), Positives = 119/121 (98%)
Frame = +1
Query: 286 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 465
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 466 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYNPAAVAFVPI 645
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIK EVSSYIKKIGYNPAAVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 646 S 648
S
Sbjct: 121 S 121
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 35.1 bits (77), Expect = 6e-04
Identities = 28/85 (32%), Positives = 38/85 (44%)
Frame = +1
Query: 325 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 504
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 505 QLIVGVNKMDSTEPPYSEPRFEEIK 579
+IV +NK+D + ++E K
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAK 271
Score = 26.2 bits (55), Expect = 0.27
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 78 KTHINIVVIGHVDSGKSTTTGSL 146
K H + ++GHVD GK+T +L
Sbjct: 143 KRHPIVTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 87 INIVVIGHVDSGKST 131
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 310 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 411
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 310 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 411
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 4 ILVGVYLGYYTQLCNP 51
+LVG+ LG+ +L NP
Sbjct: 73 VLVGLILGFLGRLANP 88
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,097
Number of Sequences: 438
Number of extensions: 3586
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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