Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_D17
(433 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellul... 168 4e-41
UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellu... 162 2e-39
UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3; Eukaryo... 117 1e-25
UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10; Therm... 97 2e-19
UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36; Archa... 96 3e-19
UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7; Archae... 95 6e-19
UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2; Thermoprote... 94 1e-18
UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1; ... 66 3e-10
UniRef50_Q9UX96 Cluster: Putative uncharacterized protein ORF-c1... 64 9e-10
UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellu... 59 5e-08
UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14; ... 57 1e-07
UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellu... 54 2e-06
UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellu... 52 4e-06
UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellul... 52 5e-06
UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38... 52 7e-06
UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthu... 51 9e-06
UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14; ... 51 1e-05
UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcu... 44 0.001
UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1; Croceib... 44 0.001
UniRef50_A5K9G7 Cluster: 50S ribosomal subunit protein L14, puta... 44 0.002
UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacte... 43 0.003
UniRef50_Q7RBS4 Cluster: LSU ribosomal protein L14P; n=4; Aconoi... 42 0.004
UniRef50_A0IXJ1 Cluster: Ribosomal protein L14b/L23e precursor; ... 42 0.006
UniRef50_Q9G8Q2 Cluster: Ribosomal protein L14; n=1; Naegleria g... 42 0.006
UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S riboso... 42 0.007
UniRef50_A0NWH4 Cluster: 50S ribosomal protein L14; n=2; Bacteri... 41 0.010
UniRef50_Q3S293 Cluster: Ribosomal protein L14; n=1; Thalassiosi... 40 0.030
UniRef50_A6SDC7 Cluster: 50S ribosomal protein L14; n=7; Pezizom... 40 0.030
UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|R... 36 0.28
UniRef50_P15767 Cluster: Mitochondrial 60S ribosomal protein L14... 35 0.64
UniRef50_Q9TCB2 Cluster: Ribosomal protein L14; n=1; Nephroselmi... 33 2.6
UniRef50_Q11M94 Cluster: Oligopeptide/dipeptide ABC transporter,... 32 4.5
UniRef50_Q9TAK1 Cluster: Ribosomal protein L14; n=1; Cafeteria r... 32 4.5
UniRef50_UPI000065FCAE Cluster: MAP/microtubule affinity-regulat... 32 5.9
UniRef50_A4C2U8 Cluster: Putative uncharacterized protein; n=2; ... 32 5.9
UniRef50_UPI0001555C66 Cluster: PREDICTED: similar to dapper2, p... 31 7.8
UniRef50_Q8NSA4 Cluster: Superfamily I DNA and RNA helicases; n=... 31 7.8
UniRef50_A6GFM0 Cluster: Fe-S-cluster-containing hydrogenase; n=... 31 7.8
>UniRef50_P48159 Cluster: 60S ribosomal protein L23; n=39; cellular
organisms|Rep: 60S ribosomal protein L23 - Drosophila
melanogaster (Fruit fly)
Length = 140
Score = 168 bits (409), Expect = 4e-41
Identities = 79/87 (90%), Positives = 80/87 (91%)
Frame = +2
Query: 125 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGV 304
I+GRLNRLPAAG GDM VATVKKGKPELRKKVMPAVVIRQRKPF RDG FIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 104
Query: 305 IXNNXGEMKGSAITGPVAKECADLWPR 385
I NN GEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAV+NCADNTGAKNLYVIAV G
Sbjct: 22 VGAVMNCADNTGAKNLYVIAVHG 44
>UniRef50_P62829 Cluster: 60S ribosomal protein L23; n=156; cellular
organisms|Rep: 60S ribosomal protein L23 - Homo sapiens
(Human)
Length = 140
Score = 162 bits (394), Expect = 2e-39
Identities = 75/89 (84%), Positives = 80/89 (89%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK + +DG F+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
GVI NN GEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 22 VGAVINCADNTGAKNLYIISVKG 44
>UniRef50_Q8SRA7 Cluster: 60S ribosomal protein L23; n=3;
Eukaryota|Rep: 60S ribosomal protein L23 -
Encephalitozoon cuniculi
Length = 146
Score = 117 bits (281), Expect = 1e-25
Identities = 53/89 (59%), Positives = 67/89 (75%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K +GRLNRLPAA GD+ V +VKKGKPELRKKV A++IRQ+K + DG I FEDNA
Sbjct: 49 KRYRGRLNRLPAAAPGDICVVSVKKGKPELRKKVHYAILIRQKKIWRRTDGSHIMFEDNA 108
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
V+ NN GE++G+ I GPV +E AD+WP+
Sbjct: 109 AVLINNKGELRGAQIAGPVPREVADMWPK 137
>UniRef50_Q8ZTR0 Cluster: 50S ribosomal protein L14P; n=10;
Thermoprotei|Rep: 50S ribosomal protein L14P -
Pyrobaculum aerophilum
Length = 144
Score = 96.7 bits (230), Expect = 2e-19
Identities = 43/80 (53%), Positives = 56/80 (70%)
Frame = +2
Query: 143 RLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXG 322
R+P AG GDM+V V++GKPELRK++ A+V+RQR+P+ DG ++ FEDNA VI G
Sbjct: 55 RIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEG 114
Query: 323 EMKGSAITGPVAKECADLWP 382
+ KGS I GPVA E WP
Sbjct: 115 DPKGSEIHGPVAMEATLRWP 134
>UniRef50_Q8PV40 Cluster: 50S ribosomal protein L14P; n=36;
Archaea|Rep: 50S ribosomal protein L14P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 132
Score = 95.9 bits (228), Expect = 3e-19
Identities = 45/89 (50%), Positives = 62/89 (69%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K +G NR+P AG GDM V +VKKG PE+RK+++ AVV+RQ++ F DG + FEDNA
Sbjct: 35 KKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNA 94
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
VI + G KG+ I GPVA+E A+ +P+
Sbjct: 95 MVITDEDGIPKGTDIKGPVAREVAERFPK 123
>UniRef50_O59427 Cluster: 50S ribosomal protein L14P; n=7;
Archaea|Rep: 50S ribosomal protein L14P - Pyrococcus
horikoshii
Length = 141
Score = 95.1 bits (226), Expect = 6e-19
Identities = 45/85 (52%), Positives = 59/85 (69%)
Frame = +2
Query: 131 GRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIX 310
G RL +AG GDM+VATVKKG+P++R +V+ AV+IRQRK + DG + FEDNA VI
Sbjct: 48 GTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIV 107
Query: 311 NNXGEMKGSAITGPVAKECADLWPR 385
G +G+ I GPVA+E A+ W R
Sbjct: 108 TPEGVPRGTEIRGPVAREAAEKWVR 132
>UniRef50_A0RVY3 Cluster: Ribosomal protein L14; n=2;
Thermoprotei|Rep: Ribosomal protein L14 - Cenarchaeum
symbiosum
Length = 144
Score = 93.9 bits (223), Expect = 1e-18
Identities = 47/105 (44%), Positives = 63/105 (60%)
Frame = +2
Query: 71 TAPTTQGQRICM*SLSKAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRK 250
T G ++ + + K R++RLPAA GD + VKKG ELRK+V AV+IRQ+
Sbjct: 31 TCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDYVNVVVKKGPAELRKQVHGAVIIRQKY 90
Query: 251 PFXXRDGXFIYFEDNAGVIXNNXGEMKGSAITGPVAKECADLWPR 385
P +G + FEDNA V+ GEMKG+ I GPVA E ++ WPR
Sbjct: 91 PVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGPVAAEASEKWPR 135
>UniRef50_A7DSY4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 148
Score = 66.1 bits (154), Expect = 3e-10
Identities = 37/83 (44%), Positives = 45/83 (54%)
Frame = -2
Query: 390 AIRGHRSAHSLATGPVMAEPFISPLLLXMTPALSSKYINXPSRXXNGFRCLMTTAGITFF 211
A GH S S ATGP+M+ PF+SP + T ALSSK P G+ CL+ TA T F
Sbjct: 14 ATLGHFSEASAATGPLMSVPFVSPSGVINTAALSSKQTLTPFNLRTGYFCLIITAPYTCF 73
Query: 210 RSSGLPFLTVATIMSPEPAAGSL 142
+S PF T SP A G+L
Sbjct: 74 LNSAGPFFTTTLQKSPTDAEGNL 96
>UniRef50_Q9UX96 Cluster: Putative uncharacterized protein
ORF-c10_023; n=2; Archaea|Rep: Putative uncharacterized
protein ORF-c10_023 - Sulfolobus solfataricus
Length = 107
Score = 64.5 bits (150), Expect = 9e-10
Identities = 40/88 (45%), Positives = 49/88 (55%)
Frame = -2
Query: 390 AIRGHRSAHSLATGPVMAEPFISPLLLXMTPALSSKYINXPSRXXNGFRCLMTTAGITFF 211
AI GH SA SLA GP+ + PF P +T ALSSK I+ PS G CL TA F
Sbjct: 20 AIFGHLSAASLAIGPLTSVPFGVPSGFIITTALSSKEIHVPSGLLYGILCLTITALNFCF 79
Query: 210 RSSGLPFLTVATIMSPEPAAGSLFRRPL 127
+SG+PFL +S A G+L + PL
Sbjct: 80 LTSGVPFLIDTITISAMLANGTLLKTPL 107
>UniRef50_Q9RXJ2 Cluster: 50S ribosomal protein L14; n=113; cellular
organisms|Rep: 50S ribosomal protein L14 - Deinococcus
radiodurans
Length = 134
Score = 58.8 bits (136), Expect = 5e-08
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +2
Query: 164 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEMKG 334
GD+IVA+VK P K V+ AVV+R DG I F+ NA VI NN GE +G
Sbjct: 48 GDIIVASVKDAAPRGAVKAGDVVKAVVVRTSHAIKRADGSTIRFDRNAAVIINNQGEPRG 107
Query: 335 SAITGPVAKECAD 373
+ + GPVA+E D
Sbjct: 108 TRVFGPVARELRD 120
>UniRef50_O46904 Cluster: Chloroplast 50S ribosomal protein L14;
n=64; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Guillardia theta (Cryptomonas phi)
Length = 121
Score = 57.2 bits (132), Expect = 1e-07
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 155 AGSGDMIVATVKKGKPEL---RKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGE 325
A GD+I+ VK P + R V+ AV++R + +DG I F+DNA VI N
Sbjct: 32 ASIGDVIIGVVKDATPNMPVKRSDVVRAVIMRTKNTIRRKDGMSIRFDDNAAVIINKENN 91
Query: 326 MKGSAITGPVAKECAD 373
+G+ + GP+A+E D
Sbjct: 92 PRGTRVFGPIARELRD 107
>UniRef50_Q39KF7 Cluster: 50S ribosomal protein L14; n=109; cellular
organisms|Rep: 50S ribosomal protein L14 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 122
Score = 53.6 bits (123), Expect = 2e-06
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +2
Query: 155 AGSGDMIVATVKKGKPELRKK---VMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGE 325
AG GD+I +VK+ P R K + AVV+R K +DG I F+ NA V+ NN E
Sbjct: 33 AGIGDIIKVSVKEATPRGRVKKGEIYNAVVVRTAKGVRRQDGSLIKFDGNAAVLLNNKLE 92
Query: 326 MKGSAITGPVAKE 364
G+ I GPV +E
Sbjct: 93 PIGTRIFGPVTRE 105
>UniRef50_Q9XD26 Cluster: 50S ribosomal protein L14; n=407; cellular
organisms|Rep: 50S ribosomal protein L14 - Leptospira
interrogans
Length = 130
Score = 52.4 bits (120), Expect = 4e-06
Identities = 27/60 (45%), Positives = 34/60 (56%)
Frame = +2
Query: 194 GKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEMKGSAITGPVAKECAD 373
GK K V AVV+R K DG +I F+DNA I ++ G KG+ I GPVA+E D
Sbjct: 57 GKKVHNKAVQRAVVVRTTKEIRRPDGSYIRFDDNACAIIDDKGNPKGTRIFGPVARELRD 116
>UniRef50_P0A473 Cluster: 50S ribosomal protein L14; n=69; cellular
organisms|Rep: 50S ribosomal protein L14 - Streptococcus
pneumoniae
Length = 122
Score = 52.0 bits (119), Expect = 5e-06
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 155 AGSGDMIVATVKKGKP--ELRK-KVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGE 325
A GD+IVA+VK+ P ++K V+ AV++R + DG +I F++NA VI
Sbjct: 33 ANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRADGSYIKFDENAAVIIREDKT 92
Query: 326 MKGSAITGPVAKE 364
+G+ I GPVA+E
Sbjct: 93 PRGTRIFGPVARE 105
>UniRef50_Q5KJU6 Cluster: Mitochondrial 60s ribosomal protein l38
(Yml38), putative; n=13; Dikarya|Rep: Mitochondrial 60s
ribosomal protein l38 (Yml38), putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 149
Score = 51.6 bits (118), Expect = 7e-06
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 18/98 (18%)
Frame = +2
Query: 125 IKGRLNRLPAAGSGDMIVATVKKGKP-----------------ELRK-KVMPAVVIRQRK 250
+K RL A GD IV V K +P ++RK + AVV+R +K
Sbjct: 27 VKTRLKSTGFATVGDEIVCVVNKARPIPANEVVKNPNASSNIQKIRKGDIRRAVVVRVKK 86
Query: 251 PFXXRDGXFIYFEDNAGVIXNNXGEMKGSAITGPVAKE 364
DG + F+D+A V+ NN GEM G+ I GPVA E
Sbjct: 87 TTQRPDGSVVRFDDSAAVLLNNKGEMLGTRIVGPVASE 124
>UniRef50_Q676X9 Cluster: HUELLENLOS-like protein; n=1; Hyacinthus
orientalis|Rep: HUELLENLOS-like protein - Hyacinthus
orientalis (Common hyacinth)
Length = 171
Score = 51.2 bits (117), Expect = 9e-06
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +2
Query: 164 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEMKG 334
GD I+A+VK+ +P+ + K V+ VV+R P DG I F+DNA V+ N GE G
Sbjct: 85 GDTIIASVKEAQPKGKVKKGDVVYGVVVRAAMPRGRCDGSEIKFDDNAVVLVNKQGEPIG 144
Query: 335 SAITGPVAKE 364
+ + GPV E
Sbjct: 145 TRVFGPVPHE 154
>UniRef50_P56792 Cluster: Chloroplast 50S ribosomal protein L14;
n=151; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L14 - Arabidopsis thaliana (Mouse-ear cress)
Length = 122
Score = 50.8 bits (116), Expect = 1e-05
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 164 GDMIVATVKKGKPEL---RKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEMKG 334
GD+IVA +K+ P R +V+ AV++R K +G I ++DNA V+ + G KG
Sbjct: 36 GDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKG 95
Query: 335 SAITGPVAKECADL 376
+ + G + +E L
Sbjct: 96 TRVFGAIPRELRQL 109
>UniRef50_Q00UK0 Cluster: Ribosomal protein L23; n=1; Ostreococcus
tauri|Rep: Ribosomal protein L23 - Ostreococcus tauri
Length = 93
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/22 (81%), Positives = 22/22 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQ 120
+GAV+NCADNTGAKNLY+IAV+
Sbjct: 62 VGAVVNCADNTGAKNLYMIAVK 83
>UniRef50_A3U7M5 Cluster: 50S ribosomal protein L14; n=1;
Croceibacter atlanticus HTCC2559|Rep: 50S ribosomal
protein L14 - Croceibacter atlanticus HTCC2559
Length = 135
Score = 44.0 bits (99), Expect = 0.001
Identities = 32/76 (42%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -2
Query: 372 SAHSLATGPVMAEPFISPLLLXMTPALSSKYINXPSRXXNGFRCLMTTAGIT---FFRSS 202
S SLATGP P ISP+ T ALSSK I PS F TTA T
Sbjct: 27 SRSSLATGPKTRVPLISPVGFNNTHALSSKRIYEPSGLRTSFLVRTTTAVETAPFLIPPF 86
Query: 201 GLPFLTVATIMSPEPA 154
G+ T+ TI+SP A
Sbjct: 87 GVASFTLTTILSPTDA 102
>UniRef50_A5K9G7 Cluster: 50S ribosomal subunit protein L14,
putative; n=4; Aconoidasida|Rep: 50S ribosomal subunit
protein L14, putative - Plasmodium vivax
Length = 183
Score = 43.6 bits (98), Expect = 0.002
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 164 GDMIVATV--KKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEMKGS 337
GD I ++ K +++K +++R++K +DG +I F+DNA VI + ++K +
Sbjct: 103 GDRIRVSIRDKTNDCTIQEKTPKGIIVRRKKETKRKDGSYIKFDDNAFVIISK-NKLKAT 161
Query: 338 AITGPVAKE 364
I GPVA E
Sbjct: 162 KIKGPVAME 170
>UniRef50_A7IFZ1 Cluster: Ribosomal protein L14; n=1; Xanthobacter
autotrophicus Py2|Rep: Ribosomal protein L14 -
Xanthobacter sp. (strain Py2)
Length = 144
Score = 42.7 bits (96), Expect = 0.003
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 164 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNN 316
GD+IV +VK+ P R K VM AVV+R K DG I F+ NA V+ NN
Sbjct: 36 GDIIVVSVKEAIPRGRVKKGDVMKAVVVRTAKDIRRVDGSVIRFDRNAAVLINN 89
>UniRef50_Q7RBS4 Cluster: LSU ribosomal protein L14P; n=4;
Aconoidasida|Rep: LSU ribosomal protein L14P -
Plasmodium yoelii yoelii
Length = 124
Score = 42.3 bits (95), Expect = 0.004
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 164 GDMIVATVKKGKPE--LRKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEMKGS 337
GD I +++ E + +K +++R++K +DG +I F+DNA V+ + ++K +
Sbjct: 44 GDRIRVSIRDKTSECGVSEKTPKGIIVRRKKETKRKDGSYIKFDDNAFVMISK-NKLKAT 102
Query: 338 AITGPVAKE 364
I GPVA E
Sbjct: 103 KIKGPVAME 111
>UniRef50_A0IXJ1 Cluster: Ribosomal protein L14b/L23e precursor;
n=1; Serratia proteamaculans 568|Rep: Ribosomal protein
L14b/L23e precursor - Serratia proteamaculans 568
Length = 119
Score = 41.9 bits (94), Expect = 0.006
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 218 VMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEMK-GSAITGPVAKE 364
V+ AVV+R +K DG I F+ NA VI NN E G+ I GPV +E
Sbjct: 53 VLKAVVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGPVTRE 102
>UniRef50_Q9G8Q2 Cluster: Ribosomal protein L14; n=1; Naegleria
gruberi|Rep: Ribosomal protein L14 - Naegleria gruberi
Length = 123
Score = 41.9 bits (94), Expect = 0.006
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +2
Query: 116 SKAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMP-----AVVIRQRKPFXXRDGXFI 280
++ IK + A GD IV +KK K + KV +++R +K +G ++
Sbjct: 19 AECIKVLKKKYQHASVGDYIVVAIKKVKMRKKMKVKMHDVRFGIIVRTKKNIKRYNGIYV 78
Query: 281 YFEDNAGVIXNNXGEMKGSAITGPVAKE 364
FEDNA V+ + G+ I GP++ E
Sbjct: 79 SFEDNAMVLLDKNLNPIGNRINGPLSYE 106
>UniRef50_UPI0000D9F818 Cluster: PREDICTED: similar to 60S ribosomal
protein L23; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L23 - Macaca mulatta
Length = 98
Score = 41.5 bits (93), Expect = 0.007
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +1
Query: 58 GAVINCADNTGAKNLYVIAVQGYQRSPEQTAGGRFWGHDCGHSQKG*T*TPEKGNAGSGH 237
GAVIN AD+TGAK+LY+I+ +G + +K T +KG + SGH
Sbjct: 23 GAVINYADSTGAKSLYIISRKGINGRLNRLPAADVGYMVITTVKKRQTRAQKKGTSSSGH 82
Query: 238 QAAETIXXA*WXI 276
E I W I
Sbjct: 83 LTTEVIPEKRWHI 95
Score = 41.1 bits (92), Expect = 0.010
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 217
K I GRLNRLPAA G M++ TVKK + +KK
Sbjct: 43 KGINGRLNRLPAADVGYMVITTVKKRQTRAQKK 75
>UniRef50_A0NWH4 Cluster: 50S ribosomal protein L14; n=2;
Bacteria|Rep: 50S ribosomal protein L14 - Stappia
aggregata IAM 12614
Length = 147
Score = 41.1 bits (92), Expect = 0.010
Identities = 30/70 (42%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -2
Query: 363 SLATGPVMAEPFISPLLLXMTPALSSKYINXPSRXXNGFRCLMTTAGIT---FFRSSGLP 193
S TGP + P S LLL T AL S I PS F TTA IT R G+
Sbjct: 46 SRGTGPKIRVPIGSLLLLTSTAALRSNRITLPSGRRISFAVRTTTAFITSPFLTRPRGIA 105
Query: 192 FLTVATIMSP 163
LT T+MSP
Sbjct: 106 SLTETTMMSP 115
>UniRef50_Q3S293 Cluster: Ribosomal protein L14; n=1; Thalassiosira
pseudonana|Rep: Ribosomal protein L14 - Thalassiosira
pseudonana (Marine diatom)
Length = 126
Score = 39.5 bits (88), Expect = 0.030
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Frame = +2
Query: 164 GDMIVATVKKGKPELRK-------KVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXG 322
GD+I+ +++K + + R +V AV+IR +K +DG ++F+ N + + G
Sbjct: 36 GDIIIVSIQKLRNKARSTSKVQKGEVHKAVIIRTKKKTIKKDGTVVFFQSNVVSLISKQG 95
Query: 323 EMKGSAITGPVAK 361
+ S I GP+ K
Sbjct: 96 KPIASRIMGPIPK 108
>UniRef50_A6SDC7 Cluster: 50S ribosomal protein L14; n=7;
Pezizomycotina|Rep: 50S ribosomal protein L14 -
Botryotinia fuckeliana B05.10
Length = 134
Score = 39.5 bits (88), Expect = 0.030
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 209 RKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEMKGSAITGPVAKE 364
R + AVV+R K DG + F+DNA V+ N GE G+ + G V E
Sbjct: 66 RGDIRHAVVVRTVKKLQRPDGSVVKFDDNACVLINKAGEPIGTRLNGVVGTE 117
>UniRef50_Q2KL07 Cluster: Ribosomal protein L23; n=3; Eukaryota|Rep:
Ribosomal protein L23 - Siniperca chuatsi (Chinese
perch)
Length = 46
Score = 36.3 bits (80), Expect = 0.28
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNL 102
+GAVINCADNTGAKNL
Sbjct: 31 VGAVINCADNTGAKNL 46
>UniRef50_P15767 Cluster: Mitochondrial 60S ribosomal protein L14;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L14 - Paramecium tetraurelia
Length = 119
Score = 35.1 bits (77), Expect = 0.64
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 164 GDMIVATVKKGKPEL---RKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEMKG 334
GD I +++ KPE R K A+++R RDG F F N V+ G
Sbjct: 36 GDYIKVSIRSTKPECTIKRGKKKKAIIVRHAFGRLKRDGSFSKFSSNVCVLLKKRTAPLG 95
Query: 335 SAITGPV 355
I GP+
Sbjct: 96 REIKGPI 102
>UniRef50_Q9TCB2 Cluster: Ribosomal protein L14; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein L14 - Nephroselmis
olivacea
Length = 124
Score = 33.1 bits (72), Expect = 2.6
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +2
Query: 164 GDMIVATVKKGKPELRKK-----VMPAVVIRQRKPFXXRDGXFIYFEDNAGVIXNNXGEM 328
GD+IV T+KK + + K V V++ +K +DG F+ N +
Sbjct: 36 GDVIVVTIKKANSKYKGKATAGQVYRGVILETKKEVTRKDGSLFSFDRNVVALMTPQENP 95
Query: 329 KGSAITG 349
G+ ITG
Sbjct: 96 MGTRITG 102
>UniRef50_Q11M94 Cluster: Oligopeptide/dipeptide ABC transporter,
ATPase subunit; n=1; Mesorhizobium sp. BNC1|Rep:
Oligopeptide/dipeptide ABC transporter, ATPase subunit -
Mesorhizobium sp. (strain BNC1)
Length = 646
Score = 32.3 bits (70), Expect = 4.5
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -2
Query: 240 LMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIALDSDHIQILCPCV 82
L TA SGL +L + ++ P+P+ G + R ++ D + I+ PCV
Sbjct: 210 LSLTAAAAIVTESGLSYLGLG-VVPPDPSWGQMIRGARAYMERDPLGIIIPCV 261
>UniRef50_Q9TAK1 Cluster: Ribosomal protein L14; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L14 - Cafeteria
roenbergensis
Length = 124
Score = 32.3 bits (70), Expect = 4.5
Identities = 18/82 (21%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +2
Query: 125 IKGRLNRLPAAGSGDMI-VATVKKGKPELRK-KVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
++G N+ GS ++ + ++ G ++ +V AV++R + +DG F+ N
Sbjct: 25 LEGFFNKTAVVGSLIVLSIRGIRSGSRRVKAGQVSLAVIVRTKAWTKFKDGSQSRFQRNC 84
Query: 299 GVIXNNXGEMKGSAITGPVAKE 364
V+ ++ G+ + GPV+++
Sbjct: 85 AVLLTRKKQILGTKVFGPVSRQ 106
>UniRef50_UPI000065FCAE Cluster: MAP/microtubule affinity-regulating
kinase 3 (EC 2.7.11.1) (Cdc25C- associated protein
kinase 1) (cTAK1) (C-TAK1) (Serine/threonine protein
kinase p78) (Ser/Thr protein kinase PAR-1) (Protein
kinase STK10).; n=1; Takifugu rubripes|Rep:
MAP/microtubule affinity-regulating kinase 3 (EC
2.7.11.1) (Cdc25C- associated protein kinase 1) (cTAK1)
(C-TAK1) (Serine/threonine protein kinase p78) (Ser/Thr
protein kinase PAR-1) (Protein kinase STK10). - Takifugu
rubripes
Length = 757
Score = 31.9 bits (69), Expect = 5.9
Identities = 23/84 (27%), Positives = 32/84 (38%)
Frame = -2
Query: 306 MTPALSSKYINXPSRXXNGFRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPL 127
M P L K + F+C +A + F +L M + A + P
Sbjct: 96 MCPKLIFKLVFRRVPLAVHFKCFSHSASLCF-AGEVFDYLVAHGRMKEKEARAKFRQVPR 154
Query: 126 IALDSDHIQILCPCVVGAVDYCSQ 55
AL S + C C+V AV YC Q
Sbjct: 155 SALVSHLCPLACFCIVSAVQYCHQ 178
>UniRef50_A4C2U8 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter irgensii 23-P
Length = 503
Score = 31.9 bits (69), Expect = 5.9
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +2
Query: 122 AIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV-----IRQRKPFXXRDGXFIYF 286
A+ R++ L G I K + K P V+ I K +G IYF
Sbjct: 154 AVSMRIDSLSLDGQATTIKGRFLKDSELIFTKEKPTVIYGYAAIPANKTLTITEGARIYF 213
Query: 287 EDNAGVIXNNXGEMK 331
DN+G+I + G +K
Sbjct: 214 HDNSGLIVDKKGSLK 228
>UniRef50_UPI0001555C66 Cluster: PREDICTED: similar to dapper2,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to dapper2, partial - Ornithorhynchus anatinus
Length = 313
Score = 31.5 bits (68), Expect = 7.8
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 44 GSPSWEQ*STAPTTQGQRICM*SLSKAIKGRLNRL-PAA 157
G P+W + S P G R+C SKA+K ++ R PAA
Sbjct: 269 GEPAWPR-SRMPAPPGPRVCRIKASKALKKKIRRFQPAA 306
>UniRef50_Q8NSA4 Cluster: Superfamily I DNA and RNA helicases; n=4;
Corynebacterium|Rep: Superfamily I DNA and RNA helicases
- Corynebacterium glutamicum (Brevibacterium flavum)
Length = 1016
Score = 31.5 bits (68), Expect = 7.8
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 116 SKAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVM 223
S +I+GR++RL SG+++V K GK ++ K M
Sbjct: 871 SVSIRGRMDRLERNKSGELVVVDFKTGKTQIAAKDM 906
>UniRef50_A6GFM0 Cluster: Fe-S-cluster-containing hydrogenase; n=1;
Plesiocystis pacifica SIR-1|Rep: Fe-S-cluster-containing
hydrogenase - Plesiocystis pacifica SIR-1
Length = 1157
Score = 31.5 bits (68), Expect = 7.8
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 122 AIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKP 253
A + R AA + D++ A KP L + MPAV++ +R+P
Sbjct: 424 AFDDKTTRFVAALAEDLVNAAKSSAKPGLASRDMPAVLVGERQP 467
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,622,168
Number of Sequences: 1657284
Number of extensions: 8515334
Number of successful extensions: 21658
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 21133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21651
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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