Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_D17
         (433 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.6  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.6  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.6  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.6  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   8.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   8.8  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 253 WFPLPDDHC 227
           WFP  D HC
Sbjct: 134 WFPFDDQHC 142


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 253 WFPLPDDHC 227
           WFP  D HC
Sbjct: 134 WFPFDDQHC 142


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 253 WFPLPDDHC 227
           WFP  D HC
Sbjct: 134 WFPFDDQHC 142


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 253 WFPLPDDHC 227
           WFP  D HC
Sbjct: 134 WFPFDDQHC 142


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 253 WFPLPDDHC 227
           WFP  D HC
Sbjct: 134 WFPFDDQHC 142


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 357 PKNVLICGRVLPQTRALXLEY 419
           P   +IC RVL    AL + Y
Sbjct: 134 PNQCVICHRVLSCKSALQMHY 154


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 324 SPLLLXMTPALSSKYINXPS 265
           S L L +T ALSS   N PS
Sbjct: 16  SLLTLKLTHALSSSVQNFPS 35


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 51  GDPGRYGISLPAGTT 7
           G  G  G+S+P GT+
Sbjct: 217 GSLGSMGVSVPCGTS 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,838
Number of Sequences: 336
Number of extensions: 2085
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)