Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_D17
(433 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 163 3e-40
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 162 4e-40
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 162 4e-40
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 162 4e-40
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 162 4e-40
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 162 4e-40
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 162 4e-40
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 162 4e-40
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 64 2e-10
BC114569-1|AAI14570.1| 1023|Homo sapiens transmembrane protein 1... 29 5.1
AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1... 29 5.1
AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein pr... 29 5.1
AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr... 29 5.1
AK023577-1|BAB14613.1| 639|Homo sapiens protein ( Homo sapiens ... 29 5.1
AK000546-1|BAA91245.1| 774|Homo sapiens protein ( Homo sapiens ... 29 5.1
AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein. 29 5.1
D32075-1|BAA06841.1| 317|Homo sapiens MAGE-4 protein protein. 29 6.8
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 163 bits (395), Expect = 3e-40
Identities = 75/89 (84%), Positives = 80/89 (89%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK + +DG F+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVRPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
GVI NN GEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 22 VGAVINCADNTGAKNLYIISVKG 44
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 162 bits (394), Expect = 4e-40
Identities = 75/89 (84%), Positives = 80/89 (89%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK + +DG F+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
GVI NN GEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 22 VGAVINCADNTGAKNLYIISVKG 44
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 162 bits (394), Expect = 4e-40
Identities = 75/89 (84%), Positives = 80/89 (89%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK + +DG F+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
GVI NN GEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 22 VGAVINCADNTGAKNLYIISVKG 44
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 162 bits (394), Expect = 4e-40
Identities = 75/89 (84%), Positives = 80/89 (89%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK + +DG F+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
GVI NN GEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 22 VGAVINCADNTGAKNLYIISVKG 44
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 162 bits (394), Expect = 4e-40
Identities = 75/89 (84%), Positives = 80/89 (89%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK + +DG F+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
GVI NN GEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 22 VGAVINCADNTGAKNLYIISVKG 44
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 162 bits (394), Expect = 4e-40
Identities = 75/89 (84%), Positives = 80/89 (89%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK + +DG F+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
GVI NN GEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 22 VGAVINCADNTGAKNLYIISVKG 44
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 162 bits (394), Expect = 4e-40
Identities = 75/89 (84%), Positives = 80/89 (89%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK + +DG F+YFEDNA
Sbjct: 37 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 96
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
GVI NN GEMKGSAITGPVAKECADLWPR
Sbjct: 97 GVIVNNKGEMKGSAITGPVAKECADLWPR 125
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 16 VGAVINCADNTGAKNLYIISVKG 38
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 162 bits (394), Expect = 4e-40
Identities = 75/89 (84%), Positives = 80/89 (89%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNA 298
K IKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVIRQRK + +DG F+YFEDNA
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNA 102
Query: 299 GVIXNNXGEMKGSAITGPVAKECADLWPR 385
GVI NN GEMKGSAITGPVAKECADLWPR
Sbjct: 103 GVIVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 22 VGAVINCADNTGAKNLYIISVKG 44
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 64.1 bits (149), Expect = 2e-10
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2
Query: 119 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 217
K IKGRLNRLPAAG GDM++ATVKKGKPELRKK
Sbjct: 43 KGIKGRLNRLPAAGVGDMVMATVKKGKPELRKK 75
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +1
Query: 55 LGAVINCADNTGAKNLYVIAVQG 123
+GAVINCADNTGAKNLY+I+V+G
Sbjct: 22 VGAVINCADNTGAKNLYIISVKG 44
>BC114569-1|AAI14570.1| 1023|Homo sapiens transmembrane protein
132A, isoform b protein.
Length = 1023
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 14 PAGSEIPYLPGSPSWEQ*STAPTTQGQRICM*SL--SKAIKGRLNR 145
PA + P LP SP+W +T T G+R S+ + ++G+ R
Sbjct: 768 PASTPAPALPSSPAWSPPATEATMGGKRQVAGSVGGNTGVRGKFER 813
>AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1
protein.
Length = 1906
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 384 RGHRSAHSLATGPVMAEPFISPLLLXMTP 298
+G AH L+ GP+ P++ P LL +TP
Sbjct: 1450 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1477
>AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein
protein.
Length = 568
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 384 RGHRSAHSLATGPVMAEPFISPLLLXMTP 298
+G AH L+ GP+ P++ P LL +TP
Sbjct: 112 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 139
>AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein
protein.
Length = 1285
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 384 RGHRSAHSLATGPVMAEPFISPLLLXMTP 298
+G AH L+ GP+ P++ P LL +TP
Sbjct: 829 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 856
>AK023577-1|BAB14613.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ13515 fis, clone PLACE1005595. ).
Length = 639
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 14 PAGSEIPYLPGSPSWEQ*STAPTTQGQRICM*SL--SKAIKGRLNR 145
PA + P LP SP+W +T T G+R S+ + ++G+ R
Sbjct: 384 PASTPAPALPSSPAWSPPATEATMGGKRQVAGSVGGNTGVRGKFER 429
>AK000546-1|BAA91245.1| 774|Homo sapiens protein ( Homo sapiens
cDNA FLJ20539 fis, clone KAT11311. ).
Length = 774
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 14 PAGSEIPYLPGSPSWEQ*STAPTTQGQRICM*SL--SKAIKGRLNR 145
PA + P LP SP+W +T T G+R S+ + ++G+ R
Sbjct: 519 PASTPAPALPSSPAWSPPATEATMGGKRQVAGSVGGNTGVRGKFER 564
>AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.
Length = 1644
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 384 RGHRSAHSLATGPVMAEPFISPLLLXMTP 298
+G AH L+ GP+ P++ P LL +TP
Sbjct: 1454 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1481
>D32075-1|BAA06841.1| 317|Homo sapiens MAGE-4 protein protein.
Length = 317
Score = 29.1 bits (62), Expect = 6.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 74 APTTQGQRICM*SLSKAIKGRLNRLPAAGSGD 169
APTT+ Q + S S + G L ++PAA S D
Sbjct: 30 APTTEEQEAAVSSSSPLVLGTLEKVPAAESAD 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,175,988
Number of Sequences: 237096
Number of extensions: 1304891
Number of successful extensions: 3762
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3762
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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