Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_D17
         (433 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3487|AAF46914.1|  140|Drosophila melanogaster CG3661-PA...   168   2e-42
M85295-1|AAA28867.1|  140|Drosophila melanogaster ribosomal prot...   154   6e-38
BT030159-1|ABN49298.1|  363|Drosophila melanogaster IP17715p pro...    27   8.2  
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro...    27   8.2  
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ...    27   8.2  
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot...    27   8.2  
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ...    27   8.2  
AE013599-2351|AAF57949.1|  366|Drosophila melanogaster CG15615-P...    27   8.2  

>AE013599-3487|AAF46914.1|  140|Drosophila melanogaster CG3661-PA
           protein.
          Length = 140

 Score =  168 bits (409), Expect = 2e-42
 Identities = 79/87 (90%), Positives = 80/87 (91%)
 Frame = +2

Query: 125 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGV 304
           I+GRLNRLPAAG GDM VATVKKGKPELRKKVMPAVVIRQRKPF  RDG FIYFEDNAGV
Sbjct: 45  IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 104

Query: 305 IXNNXGEMKGSAITGPVAKECADLWPR 385
           I NN GEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +1

Query: 55  LGAVINCADNTGAKNLYVIAVQG 123
           +GAV+NCADNTGAKNLYVIAV G
Sbjct: 22  VGAVMNCADNTGAKNLYVIAVHG 44


>M85295-1|AAA28867.1|  140|Drosophila melanogaster ribosomal protein
           L17A protein.
          Length = 140

 Score =  154 bits (373), Expect = 6e-38
 Identities = 73/87 (83%), Positives = 74/87 (85%)
 Frame = +2

Query: 125 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXXRDGXFIYFEDNAGV 304
           I+GRLNRLPAAG GDM VATVKKGKPELRKKV      RQRKPF  RDG FIYFEDNAGV
Sbjct: 45  IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVSVVPSARQRKPFRRRDGVFIYFEDNAGV 104

Query: 305 IXNNXGEMKGSAITGPVAKECADLWPR 385
           I NN GEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +1

Query: 55  LGAVINCADNTGAKNLYVIAVQG 123
           +GAV+NCADNTGAKNLYVIAV G
Sbjct: 22  VGAVMNCADNTGAKNLYVIAVHG 44


>BT030159-1|ABN49298.1|  363|Drosophila melanogaster IP17715p
           protein.
          Length = 363

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 286 KVYKXSITXXEWFPLPDDHCRHY 218
           K++K  +   EWFP PD H  H+
Sbjct: 262 KIWKP-VVISEWFPSPDHHDHHH 283


>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
          Length = 2176

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 18   RVAKFRISLGLPAGSSN 68
            RV K+++SL +PAGSSN
Sbjct: 1217 RVKKYQLSLEIPAGSSN 1233


>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
            protein.
          Length = 2342

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 18   RVAKFRISLGLPAGSSN 68
            RV K+++SL +PAGSSN
Sbjct: 1382 RVKKYQLSLEIPAGSSN 1398


>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
            EAST protein.
          Length = 2362

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 18   RVAKFRISLGLPAGSSN 68
            RV K+++SL +PAGSSN
Sbjct: 1394 RVKKYQLSLEIPAGSSN 1410


>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
            protein.
          Length = 2301

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 18   RVAKFRISLGLPAGSSN 68
            RV K+++SL +PAGSSN
Sbjct: 1341 RVKKYQLSLEIPAGSSN 1357


>AE013599-2351|AAF57949.1|  366|Drosophila melanogaster CG15615-PA
           protein.
          Length = 366

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 286 KVYKXSITXXEWFPLPDDHCRHY 218
           K++K  +   EWFP PD H  H+
Sbjct: 265 KIWKP-VVISEWFPSPDHHDHHH 286


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,088,030
Number of Sequences: 53049
Number of extensions: 411045
Number of successful extensions: 962
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)