Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_D13
         (434 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   3.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   3.8  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   5.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   8.9  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 234 YTFYIVYITHXALCPTPIVTLCSLITHVYYALLSV 130
           Y    V++ +  +C   +VTL +   H++  L  V
Sbjct: 146 YILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVV 180


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 234 YTFYIVYITHXALCPTPIVTLCSLITHVYYALLSV 130
           Y    V++ +  +C   +VTL +   H++  L  V
Sbjct: 146 YILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVV 180


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 168 SLITHVYYALLSV 130
           +L THV+YA L V
Sbjct: 51  NLCTHVHYAFLGV 63


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 183 IVTLCSLITHVYYALLSVE*SNFAAD 106
           I  LC LI  +   LL  E  NF  D
Sbjct: 261 IPVLCKLIQSIPTHLLDSEKKNFIVD 286


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 240 VVQWMQSQR 266
           +VQWMQ Q+
Sbjct: 378 IVQWMQDQK 386


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,259
Number of Sequences: 336
Number of extensions: 2048
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)