Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_D13
(434 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M82887-1|AAB59218.1| 640|Drosophila melanogaster dual bar prote... 28 4.8
M82884-1|AAA28383.2| 645|Drosophila melanogaster dual bar prote... 28 4.8
BT022144-1|AAY51539.1| 645|Drosophila melanogaster IP01479p pro... 28 4.8
AE014298-2565|AAF48725.1| 645|Drosophila melanogaster CG5488-PA... 28 4.8
AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolariz... 28 6.3
AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolariz... 28 6.3
AF181642-1|AAD55428.1| 1073|Drosophila melanogaster BcDNA.GH1077... 28 6.3
AE014296-765|AAF47839.2| 1073|Drosophila melanogaster CG14992-PA... 28 6.3
AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB... 28 6.3
AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE... 28 6.3
>M82887-1|AAB59218.1| 640|Drosophila melanogaster dual bar protein
protein.
Length = 640
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 244 SSGCRASVAAPALACCRAGSARGRPAQAPHKQSRV 348
++ A+ AA ALA +G RG P + +QS V
Sbjct: 70 AASAAAAAAAAALAAASSGGGRGSPTDSEREQSLV 104
>M82884-1|AAA28383.2| 645|Drosophila melanogaster dual bar protein
protein.
Length = 645
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 244 SSGCRASVAAPALACCRAGSARGRPAQAPHKQSRV 348
++ A+ AA ALA +G RG P + +QS V
Sbjct: 70 AASAAAAAAAAALAAASSGGGRGSPTDSEREQSLV 104
>BT022144-1|AAY51539.1| 645|Drosophila melanogaster IP01479p
protein.
Length = 645
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 244 SSGCRASVAAPALACCRAGSARGRPAQAPHKQSRV 348
++ A+ AA ALA +G RG P + +QS V
Sbjct: 70 AASAAAAAAAAALAAASSGGGRGSPTDSEREQSLV 104
>AE014298-2565|AAF48725.1| 645|Drosophila melanogaster CG5488-PA
protein.
Length = 645
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 244 SSGCRASVAAPALACCRAGSARGRPAQAPHKQSRV 348
++ A+ AA ALA +G RG P + +QS V
Sbjct: 70 AASAAAAAAAAALAAASSGGGRGSPTDSEREQSLV 104
>AY928072-1|AAX78396.1| 1319|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B2C2 protein.
Length = 1319
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 226 KSVVVLSSGCRASVAAP-ALACCRAGSARGRPAQAPHKQSR 345
+S+V LS+G A+ AAP +++ RAG + + Q PH Q +
Sbjct: 52 QSLVSLSNGQPAASAAPDSVSLLRAGDDQQQHPQQPHLQQQ 92
>AY928069-1|AAX78393.1| 1282|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B1C1 protein.
Length = 1282
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 226 KSVVVLSSGCRASVAAP-ALACCRAGSARGRPAQAPHKQSR 345
+S+V LS+G A+ AAP +++ RAG + + Q PH Q +
Sbjct: 52 QSLVSLSNGQPAASAAPDSVSLLRAGDDQQQHPQQPHLQQQ 92
>AF181642-1|AAD55428.1| 1073|Drosophila melanogaster BcDNA.GH10777
protein.
Length = 1073
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 83 KN*SRNKQSAAKFDYSTLNSA*YTCVISEQSVTIGV 190
K S KQS+A + S N TC+I E+ +T+G+
Sbjct: 92 KQPSSKKQSSAARESSQGNGTQLTCLIHEKDITMGL 127
>AE014296-765|AAF47839.2| 1073|Drosophila melanogaster CG14992-PA
protein.
Length = 1073
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 83 KN*SRNKQSAAKFDYSTLNSA*YTCVISEQSVTIGV 190
K S KQS+A + S N TC+I E+ +T+G+
Sbjct: 92 KQPSSKKQSSAARESSQGNGTQLTCLIHEKDITMGL 127
>AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB,
isoform B protein.
Length = 1290
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 226 KSVVVLSSGCRASVAAP-ALACCRAGSARGRPAQAPHKQSR 345
+S+V LS+G A+ AAP +++ RAG + + Q PH Q +
Sbjct: 52 QSLVSLSNGQPAASAAPDSVSLLRAGDDQQQHPQQPHLQQQ 92
>AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE,
isoform E protein.
Length = 1327
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 226 KSVVVLSSGCRASVAAP-ALACCRAGSARGRPAQAPHKQSR 345
+S+V LS+G A+ AAP +++ RAG + + Q PH Q +
Sbjct: 52 QSLVSLSNGQPAASAAPDSVSLLRAGDDQQQHPQQPHLQQQ 92
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,184,873
Number of Sequences: 53049
Number of extensions: 344873
Number of successful extensions: 703
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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