Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_D13
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   1.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   2.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   2.6  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        22   2.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.0  

>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 190 GTKSXVCDVYYIKSVVVLSSGCRASVAA 273
           G KS +  V Y+K++ V  +GC   V A
Sbjct: 248 GLKSDIPPVAYVKALDVWMAGCMMFVFA 275


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 39  KYFQIVTNF*SEVNLKINPGINNLQQNSITRHSTVHNI 152
           KYF  + N+     L +N G+N + +NS+    T++++
Sbjct: 538 KYFYEIDNW----MLDLNSGLNKITRNSLDCFFTMNDL 571


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 39  KYFQIVTNF*SEVNLKINPGINNLQQNSITRHSTVHNI 152
           KYF  + N+     L +N G+N + +NS+    T++++
Sbjct: 538 KYFYEIDNW----MLDLNSGLNKITRNSLDCFFTMNDL 571


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 108 DCLFLD*FLNSLHFKSSSLF 49
           DCL+LD + NSL      +F
Sbjct: 3   DCLYLDVYTNSLDQSKPVMF 22


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 210 THXALCPTP 184
           TH  LCPTP
Sbjct: 377 THSQLCPTP 385


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 426  DPLDSXVSAECDDGVMCCSAIDDAEEHTRLLVW 328
            D +    + E   G      +DD ++HT  + W
Sbjct: 965  DTVTIITAEEAPSGPPTSIRVDDLDQHTLKVTW 997


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 380 CVARP*TTLKNTRDCLCG 327
           C  RP   +K++ +C CG
Sbjct: 137 CEVRPIKRVKDSTNCNCG 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,423
Number of Sequences: 438
Number of extensions: 2020
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)