Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_D11
(609 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051302-1|AAH51302.1| 125|Homo sapiens mitochondrial ribosomal... 77 6e-14
BC010076-1|AAH10076.1| 125|Homo sapiens mitochondrial ribosomal... 77 6e-14
BC004976-1|AAH04976.2| 125|Homo sapiens mitochondrial ribosomal... 77 6e-14
BC000547-1|AAH00547.2| 125|Homo sapiens mitochondrial ribosomal... 77 6e-14
AY061855-1|AAL35739.1| 125|Homo sapiens mitochondrial ribosomal... 77 6e-14
AB049942-1|BAB40995.1| 166|Homo sapiens mitochondrial ribosomal... 77 6e-14
BC042752-1|AAH42752.1| 96|Homo sapiens MRPS6 protein protein. 48 2e-05
>BC051302-1|AAH51302.1| 125|Homo sapiens mitochondrial ribosomal
protein S6 protein.
Length = 125
Score = 76.6 bits (180), Expect = 6e-14
Identities = 36/95 (37%), Positives = 49/95 (51%)
Frame = +2
Query: 89 MPTYELALLLRNMPKPELKTSLKRISHAIFDCXXXXXXXXXLGFRPMPYKSTAHGMTHKE 268
MP YELAL+L+ M +PE +LKR A+ D LG R +PY+ +AH H
Sbjct: 1 MPRYELALILKAMQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHNR 60
Query: 269 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFK 373
YF+ PT AV + E RD+D++R K
Sbjct: 61 GGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVK 95
>BC010076-1|AAH10076.1| 125|Homo sapiens mitochondrial ribosomal
protein S6 protein.
Length = 125
Score = 76.6 bits (180), Expect = 6e-14
Identities = 36/95 (37%), Positives = 49/95 (51%)
Frame = +2
Query: 89 MPTYELALLLRNMPKPELKTSLKRISHAIFDCXXXXXXXXXLGFRPMPYKSTAHGMTHKE 268
MP YELAL+L+ M +PE +LKR A+ D LG R +PY+ +AH H
Sbjct: 1 MPRYELALILKAMQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHNR 60
Query: 269 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFK 373
YF+ PT AV + E RD+D++R K
Sbjct: 61 GGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVK 95
>BC004976-1|AAH04976.2| 125|Homo sapiens mitochondrial ribosomal
protein S6 protein.
Length = 125
Score = 76.6 bits (180), Expect = 6e-14
Identities = 36/95 (37%), Positives = 49/95 (51%)
Frame = +2
Query: 89 MPTYELALLLRNMPKPELKTSLKRISHAIFDCXXXXXXXXXLGFRPMPYKSTAHGMTHKE 268
MP YELAL+L+ M +PE +LKR A+ D LG R +PY+ +AH H
Sbjct: 1 MPRYELALILKAMQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHNR 60
Query: 269 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFK 373
YF+ PT AV + E RD+D++R K
Sbjct: 61 GGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVK 95
>BC000547-1|AAH00547.2| 125|Homo sapiens mitochondrial ribosomal
protein S6 protein.
Length = 125
Score = 76.6 bits (180), Expect = 6e-14
Identities = 36/95 (37%), Positives = 49/95 (51%)
Frame = +2
Query: 89 MPTYELALLLRNMPKPELKTSLKRISHAIFDCXXXXXXXXXLGFRPMPYKSTAHGMTHKE 268
MP YELAL+L+ M +PE +LKR A+ D LG R +PY+ +AH H
Sbjct: 1 MPRYELALILKAMQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHNR 60
Query: 269 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFK 373
YF+ PT AV + E RD+D++R K
Sbjct: 61 GGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVK 95
>AY061855-1|AAL35739.1| 125|Homo sapiens mitochondrial ribosomal
protein S6 protein.
Length = 125
Score = 76.6 bits (180), Expect = 6e-14
Identities = 36/95 (37%), Positives = 49/95 (51%)
Frame = +2
Query: 89 MPTYELALLLRNMPKPELKTSLKRISHAIFDCXXXXXXXXXLGFRPMPYKSTAHGMTHKE 268
MP YELAL+L+ M +PE +LKR A+ D LG R +PY+ +AH H
Sbjct: 1 MPRYELALILKAMQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHNR 60
Query: 269 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFK 373
YF+ PT AV + E RD+D++R K
Sbjct: 61 GGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVK 95
>AB049942-1|BAB40995.1| 166|Homo sapiens mitochondrial ribosomal
protein S6 protein.
Length = 166
Score = 76.6 bits (180), Expect = 6e-14
Identities = 36/95 (37%), Positives = 49/95 (51%)
Frame = +2
Query: 89 MPTYELALLLRNMPKPELKTSLKRISHAIFDCXXXXXXXXXLGFRPMPYKSTAHGMTHKE 268
MP YELAL+L+ M +PE +LKR A+ D LG R +PY+ +AH H
Sbjct: 42 MPRYELALILKAMQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHNR 101
Query: 269 ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFK 373
YF+ PT AV + E RD+D++R K
Sbjct: 102 GGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVK 136
>BC042752-1|AAH42752.1| 96|Homo sapiens MRPS6 protein protein.
Length = 96
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 212 LGFRPMPYKSTAHGMTHKEANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFK 373
LG R +PY+ +AH H YF+ PT AV + E RD+D++R K
Sbjct: 13 LGERALPYRISAHSQQHNRGGYFLVDFYAPTAAVESMVEHLSRDIDVIRGNIVK 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,189,159
Number of Sequences: 237096
Number of extensions: 1320674
Number of successful extensions: 2047
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2047
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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