Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_D11
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF000264-8|AAK70649.2|  165|Caenorhabditis elegans Hypothetical ...    28   4.5  

>Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical
           protein F46F3.2 protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -1

Query: 477 LVFYRSVSFFEHLHDMQEAEVPPAKVQAFLXXSLTLKNLCRTMSTSLLYSS 325
           L   R+  +  + HD ++ +VP   +Q F    +  +N+CR +   L  SS
Sbjct: 71  LAIRRAEVWIRNEHDAEKYDVPVELLQNFTTIRIVFRNVCRLLPRVLQISS 121


>AF000264-8|AAK70649.2|  165|Caenorhabditis elegans Hypothetical
           protein F43E2.11 protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 292 YLKDKIVGFFVGHTMCSGLV 233
           +LK    GFFV H MC+G +
Sbjct: 8   FLKQGSTGFFVAHFMCAGFI 27


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,802,329
Number of Sequences: 27780
Number of extensions: 245237
Number of successful extensions: 525
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)