Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_D11
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    24   1.0  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   7.1  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   7.1  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   7.1  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   9.4  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +1

Query: 169 CYIRLRRNHXKHXKFRISTNALQVHCTWYDPQRSQL 276
           C+ R  R+H      R+ T     HC+  D Q  Q+
Sbjct: 15  CHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQV 50


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 530 FPKVSXKMYCFFNCAIK 580
           FP+   K+ C+FNC ++
Sbjct: 62  FPE-DEKLKCYFNCVLE 77


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 426 PAYREDVQKMIQ--IGKTQVNXFTYKFKYN 509
           PAYR +VQK I    G  + +   Y +++N
Sbjct: 102 PAYRAEVQKAISECKGIAKGDNCEYAYRFN 131


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -2

Query: 161 SSSMKFLIQVSACFVTIKQVH 99
           S+   FL+Q+ +CF T+ +++
Sbjct: 41  STKPPFLVQLHSCFQTMDRLY 61


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 389 RKACTLAGGTSAS 427
           R  C++AGGTS S
Sbjct: 78  RLLCSIAGGTSES 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,092
Number of Sequences: 438
Number of extensions: 3194
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)