Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_D07
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -2

Query: 639  YLIAFYK--QNXQLQLKMNSNSH*MLIKNQCQMHFIQTLESQSRF 511
            YL+ FYK  ++ +L  K+ +N H ++  ++ +M  +Q L  ++ F
Sbjct: 1031 YLVKFYKVSKSGELIHKIETNEHEII--DKIEMFSLQILNERAEF 1073



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 280 SFAYCSLALAAFCSHSVLSFIDFQISPPFLAISVT 176
           +  YCSLA+   C   +       I+ P L I V+
Sbjct: 412 ALVYCSLAIFVLCELLIEGTTSILINVPSLIIHVS 446


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -2

Query: 639 YLIAFYK--QNXQLQLKMNSNSH*MLIKNQCQMHFIQTLESQSRF 511
           YL+ FYK  ++ +L  K+ +N H ++  ++ +M  +Q L  ++ F
Sbjct: 312 YLVKFYKVSKSGELIHKIETNEHEII--DKIEMFSLQILNERAEF 354


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +3

Query: 99  KRPMSAYMLWLNSAREQIKSE 161
           K+P++A+ML++   R ++ +E
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAE 500


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +3

Query: 99  KRPMSAYMLWLNSAREQIKSE 161
           K+P++A+ML++   R ++ +E
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAE 392


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 336  EPSFRPXRHHRHWHCK 289
            +PS+RP     HW  K
Sbjct: 1171 KPSYRPPSTTNHWQTK 1186


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 596 FNCNWXFC 619
           F CNW FC
Sbjct: 345 FVCNWLFC 352


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,327
Number of Sequences: 336
Number of extensions: 2343
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)