Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_D05
         (645 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1422 + 33453498-33453519,33453617-33454887                       29   4.2  
10_05_0114 + 9294747-9294788,9294883-9294996,9295066-9295173,929...    28   7.3  
01_01_0870 - 6789903-6792251                                           28   7.3  
10_08_0753 + 20324011-20324113,20324210-20324231,20324344-203244...    27   9.7  

>04_04_1422 + 33453498-33453519,33453617-33454887
          Length = 430

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 577 IGPVGRTVYTAALQVCLYDINSXVDVLVYRILSNGSVQ 464
           IG +GRT +   +++  +  ++    LVY  L NGS++
Sbjct: 140 IGTIGRTYHVHLVRLYGFCFDADTKALVYEFLENGSLE 177


>10_05_0114 +
           9294747-9294788,9294883-9294996,9295066-9295173,
           9295774-9296145,9296584-9296652,9296754-9296825,
           9297070-9297198,9297690-9297770,9298622-9298807,
           9299135-9299860
          Length = 632

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -1

Query: 177 RNGKQKIEAKHEXLYTGHSTFESHCDXIKDYRQIGXLREXNDAHQRP 37
           ++GKQ  E        G  +F   C  + +  ++  + E ND+  RP
Sbjct: 120 KDGKQIQEISEHESCQGGKSFSDGCSIVNNSERLSNMFEGNDSSSRP 166


>01_01_0870 - 6789903-6792251
          Length = 782

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = -3

Query: 631 AVIDLLGGAARARYGQTVIGPVGRTVYTAALQVCLYDINSXVDVLVYRILSNGSVQVAH 455
           AV +L G     +  +T +  VG   +T  +++  + +N    +LVY  +SNGS+  AH
Sbjct: 500 AVKNLKGVGQAEKQFRTEVQTVGMIRHTNLVRLLGFCVNGNRRLLVYEYMSNGSLD-AH 557


>10_08_0753 +
           20324011-20324113,20324210-20324231,20324344-20324400,
           20324704-20324785,20324903-20324998,20325265-20325389,
           20325484-20325502,20325598-20325744
          Length = 216

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/67 (22%), Positives = 24/67 (35%)
 Frame = +1

Query: 1   CVATTCRSVCFVWPLVCIIXFP*XSNLAVIFNXITMALEGGMSCVKXLMFCFNLLFAITG 180
           C  + C  VC    + C       S   ++ +   +      +C+   MFC      I  
Sbjct: 75  CGESNCPEVCLATEVFCCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMFCLQQFACICS 134

Query: 181 LIILIVG 201
           L+  IVG
Sbjct: 135 LVACIVG 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,421,861
Number of Sequences: 37544
Number of extensions: 319121
Number of successful extensions: 833
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)