Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_D05
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 41 7e-04
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 41 9e-04
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 41 9e-04
L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin fam... 33 0.17
L14745-7|AAK71354.1| 234|Caenorhabditis elegans Tetraspanin fam... 33 0.23
AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical ... 33 0.23
Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical pr... 31 0.53
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 31 0.53
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 31 0.92
Z83114-5|CAB05550.2| 485|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF348167-1|AAK37545.1| 485|Caenorhabditis elegans Pelle IRAK-li... 28 6.5
Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 8.6
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 72.5 bits (170), Expect = 2e-13
Identities = 29/95 (30%), Positives = 48/95 (50%)
Frame = +2
Query: 323 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKN 502
CCGA++EN+C+ ++F+V L ++ E+A I GY H + L + +Y +
Sbjct: 71 CCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRG 130
Query: 503 VHXTIDIIQTDLQCCGINSPADWADHGLPIPSTCC 607
V D +CCG+ + +DW IP +CC
Sbjct: 131 VESAWDKTHQLFECCGVTNSSDWLTF-TTIPDSCC 164
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 112 LEGGMSCVKXLMFCFNLLFAITGLIILIVG 201
+EGG++ VK L+F NL+ + GL ++IVG
Sbjct: 2 VEGGVTIVKYLLFLANLVLWVGGLSLIIVG 31
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = +2
Query: 323 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKN 502
C G+++EN + +S L ++ +AE + G+ Y L++ + LN + Y +
Sbjct: 103 CVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNYIRNLLNDVVVGYRDDPD 162
Query: 503 VHXTIDIIQTDLQCCGINSPADW 571
+ ID +Q CCGIN DW
Sbjct: 163 LQLLIDSMQETWMCCGINGADDW 185
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 130 CVKXLMFCFNLLFAITGLIILIVGIRA 210
CVK +F FN++F + G +L+ G+ A
Sbjct: 37 CVKYSVFSFNVIFFLLGFGLLLFGVWA 63
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 323 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASI-TQYPVXK 499
C GA K N C + F L++ F ELA + + K ++ V ++ +I +Y
Sbjct: 75 CIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRYSSET 134
Query: 500 NVHXTIDIIQTDLQCCGINSPADW 571
D +Q +CCG+ + DW
Sbjct: 135 AFKDAFDTVQEKFECCGVKTYTDW 158
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 323 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKN 502
CCG + +I +S+ + ++ VA L+ GI K L+ + LN + Y
Sbjct: 132 CCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVELSDALNYMVQHYYQGPG 191
Query: 503 V-HXTIDIIQTDLQCCGINSPADWADHGLPIPSTC 604
V ++D +QT +CCG +D+ IP +C
Sbjct: 192 VVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSC 226
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Frame = +2
Query: 344 NHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNL-NASITQYPVXKNVHXTID 520
N C ++ + + L+ + E + + H E + +L N + Y + N+ ++
Sbjct: 92 NRCALVFYLLMLIFSMIMEGCLIYFTFSYHATYEQELNASLPNDILNNYNLDPNIAKAVN 151
Query: 521 IIQTDLQCCGINSPADW-----ADHGLPIPST 601
+Q D +CCG N+ DW DH LP T
Sbjct: 152 YLQRDSKCCGSNAFNDWPKPEVEDHYLPYAKT 183
>Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical
protein C17G1.8 protein.
Length = 291
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Frame = +2
Query: 359 ITFSVFLLIIF-VAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKNVHXTI--DIIQ 529
I F + L+++ +A + + +L S++ N+N + + + + ++ D +Q
Sbjct: 82 IGFVILLILVHGIARITGSLHKEEAKENLRKSMLHNINTTAVVTKIGREIKLSLTWDHLQ 141
Query: 530 TDLQCCGINSPADWA-----DHGLPIPSTCCSAQ 616
+LQCCG+++ DW + L P +CC Q
Sbjct: 142 RELQCCGVDNYTDWHYSVHWPNNLYTPDSCCDPQ 175
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = +2
Query: 326 CGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASI-------TQ 484
CGAV + +++ F +FL+ F+A++A+G + + D SV N+ + T
Sbjct: 46 CGAVNRSRFLLLAFVMFLIGTFLADVAMGTLS-LFYKDKVYSVKENVREIVKSKYGVMTS 104
Query: 485 YPVXKNVHXTIDIIQTDLQCCGINSPADW 571
P K V ID +Q +CCG P D+
Sbjct: 105 EPENKMVTEFIDKLQFYEKCCGSLGPTDY 133
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/99 (22%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = +2
Query: 329 GAVKENHCMIITFSVFLLIIFVAELAVGIAGY-MKHTDLEDSVMRN--LNASITQYPVXK 499
GA+++N ++ F+ + + ++ +AV + + + +TD + + N L ++ Y +
Sbjct: 93 GALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNR 152
Query: 500 NVHXTIDIIQTDLQCCGINSPAD-WADHGLPIPSTCCSA 613
N+ +D +Q +L+CCG++S A + D + C ++
Sbjct: 153 NLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNS 191
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/99 (22%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = +2
Query: 329 GAVKENHCMIITFSVFLLIIFVAELAVGIAGY-MKHTDLEDSVMRN--LNASITQYPVXK 499
GA+++N ++ F+ + + ++ +AV + + + +TD + + N L ++ Y +
Sbjct: 117 GALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNR 176
Query: 500 NVHXTIDIIQTDLQCCGINSPAD-WADHGLPIPSTCCSA 613
N+ +D +Q +L+CCG++S A + D + C ++
Sbjct: 177 NLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNS 215
>L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin family
protein 1 protein.
Length = 244
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +2
Query: 356 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKNVHXTIDIIQTD 535
+IT+ V ++++ E+ G+A ++ L D+ ++A T N + IIQ
Sbjct: 101 MITYLVLIIVLVSLEIGCGVAVLVRRNSLHDNTNSLIDAMYT-----TNSVNDLKIIQDK 155
Query: 536 LQCCGINS 559
CCGI +
Sbjct: 156 YNCCGIEN 163
>L14745-7|AAK71354.1| 234|Caenorhabditis elegans Tetraspanin family
protein 2 protein.
Length = 234
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = +2
Query: 329 GAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKNVH 508
GA+ + ++ T V ++I F+ EL IA + K L + R N V
Sbjct: 91 GAISQKKPVLATCLVLIVIFFIMELGGSIALWSKRGSLRSLLYRFANDIYLTNSVFD--- 147
Query: 509 XTIDIIQTDLQCCGI 553
I IIQ CCG+
Sbjct: 148 --ISIIQNTYNCCGV 160
>AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical
protein Y45F10B.1 protein.
Length = 241
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 371 VFLLIIFVAELAVGIAGYMKHTD--LEDSVMRNLNASITQYPVXKNVHXTIDIIQTDLQC 544
V + I+FV ++ V I ++ + D + V + + Y T+D + T L+C
Sbjct: 99 VLVFIVFVVKI-VAIVMFLANNDHLRREFVGVYRDELVANYHNNSRTKNTLDWVHTSLKC 157
Query: 545 CGINSPADWADHGLPIPSTC 604
CG N D+ G P++C
Sbjct: 158 CGANGCEDFLPAG-NFPTSC 176
>Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical
protein F53B2.2 protein.
Length = 230
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 371 VFLLIIFVAELAVGIAGYMKHTD--LEDSVMRNLNASITQYPVXKNVHXTIDIIQTDLQC 544
V + ++FV ++ V I ++ + D + V + + Y T+D + T L+C
Sbjct: 88 VLVFLVFVVKI-VAIVMFLANKDHLRREFVGVYRDELVANYHNNSRTKNTLDWVHTSLKC 146
Query: 545 CGINSPADWADHGLPIPSTC 604
CG N D+ G P++C
Sbjct: 147 CGANGCEDFLPAG-NFPTSC 165
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 31.5 bits (68), Expect = 0.53
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +2
Query: 329 GAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKNVH 508
GAV + ++ + +F++I+F+ E+A+GI +K + +V + S N
Sbjct: 91 GAVIRSKYLLAPYFLFMVILFLLEIAIGITVLVKRRSVRRTVKEYVFDSFNM-----NAQ 145
Query: 509 XTIDIIQTDLQCCGI-NSPADWADHGLPIPSTCCSA 613
I CCG N P G P TC SA
Sbjct: 146 ADISAFNFRYNCCGAENLPNLNCFAGQP---TCSSA 178
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 94 NXITMALEGGMSCVKXLMFCFNLLFAITGLIILIVGI 204
N TM L +K +F FNL+F + GLI L +G+
Sbjct: 5 NQSTMPLSCTARALKFSLFIFNLVFLLCGLICLGIGL 41
>Z83114-5|CAB05550.2| 485|Caenorhabditis elegans Hypothetical
protein K09B11.1 protein.
Length = 485
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 613 GGAARARYGQTVIGPVGRTVYTAALQVCLYDINSXVDVLVYRILSNGSVQ 464
G R R T + + R + L + Y + LVY+ +SNGS++
Sbjct: 226 GSRERLRQSLTELRTLARFRHDNILPIYAYSLEGSEPCLVYQFMSNGSLE 275
>AF348167-1|AAK37545.1| 485|Caenorhabditis elegans Pelle IRAK-like
kinase 1 protein.
Length = 485
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 613 GGAARARYGQTVIGPVGRTVYTAALQVCLYDINSXVDVLVYRILSNGSVQ 464
G R R T + + R + L + Y + LVY+ +SNGS++
Sbjct: 226 GSRERLRQSLTELRTLARFRHDNILPIYAYSLEGSEPCLVYQFMSNGSLE 275
>Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical
protein F53B6.1 protein.
Length = 258
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +2
Query: 338 KENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLN--ASITQ-YPVX--KN 502
KE C + + +V ++I V + G G L NL S+ + Y K
Sbjct: 84 KEMRCFVTSCAVASIVIAVMLIIGGCIGLNFRDQLTHYTPLNLKMLTSLRELYGTHDMKG 143
Query: 503 VHXTIDIIQTDLQCCGIN 556
+ + D +Q++ +CCG+N
Sbjct: 144 ITESWDALQSNFKCCGVN 161
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 431 HTDLEDSVMRNLNASITQYPVXKNVHXTIDIIQTDLQCCGIN-SPADWADHGLPIPS 598
HT+ S MR S + +NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMRFKENSSSVGSGDQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 571
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 431 HTDLEDSVMRNLNASITQYPVXKNVHXTIDIIQTDLQCCGIN-SPADWADHGLPIPS 598
HT+ S MR S + +NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMRFKENSSSVGSGDQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 571
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 347 HCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYP 490
H + + S LLII A G+ + H +D V+RN+N I Q P
Sbjct: 568 HAIRLIRSGGLLIINQALNGGGVMSSIDHMTNDDRVIRNMNIRIKQDP 615
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,789,423
Number of Sequences: 27780
Number of extensions: 267275
Number of successful extensions: 803
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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