Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_D03
         (597 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       25   1.4  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   1.4  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   4.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   7.5  

>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 44  RNIPLQ*NFRNSKITIYFCKMRSV 115
           RNIPL   +RN  +T Y  +++S+
Sbjct: 168 RNIPLSDTYRNQSMTYYSSEVQSL 191



 Score = 22.6 bits (46), Expect = 9.9
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +2

Query: 8   IXACPHGYSLNIRNIPLQ*NFRNSKITIYFCKMRSVTVKDVEQDKIVKT 154
           I   P+ ++++   + +  N   +K+     K+ S  VKD+ ++  +KT
Sbjct: 289 IIGIPYKHNVSTMYVIMPNNSNRAKLQQLIPKLTSEVVKDLIENMAIKT 337


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 293 YLHSLTCWSQDCHQ 334
           YLH L  W   CHQ
Sbjct: 549 YLHGLVSWGYGCHQ 562


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 343 VGANVMELHLHISAGHQAVLHARL 414
           +G   M LH H   GH A LHA L
Sbjct: 341 MGMGSMGLHHH-HPGHHAALHAHL 363


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = -3

Query: 244 RSQLFEASCLYKIHVLRYLDFARFF*VSSDSFNNLVLFNILYCDGTHLAEVNCYFTVTKV 65
           R   FEA  +  +H+L  L   R   V   SF+N      +  DG +L ++   FT    
Sbjct: 492 RRGTFEA--MKSLHILN-LSQNRLKTVEQASFDNNTKLQAIRLDGNYLTDIAGLFTKLPN 548

Query: 64  LL 59
           LL
Sbjct: 549 LL 550


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,415
Number of Sequences: 2352
Number of extensions: 11219
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)