Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_D02
(644 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 334 1e-90
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 223 2e-57
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 216 3e-55
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 192 5e-48
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 186 3e-46
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 181 2e-44
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 169 4e-41
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 163 2e-39
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 130 2e-29
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 130 3e-29
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 130 4e-29
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 111 2e-23
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 110 2e-23
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 110 3e-23
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 109 6e-23
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 108 1e-22
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 107 2e-22
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 105 9e-22
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 105 9e-22
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 101 2e-20
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 97 3e-19
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 96 7e-19
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 94 2e-18
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 93 7e-18
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 87 3e-16
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 87 5e-16
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 83 4e-15
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 82 1e-14
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 82 1e-14
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 81 2e-14
UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genom... 67 4e-10
UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 64 4e-09
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 63 5e-09
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 61 3e-08
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 60 6e-08
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 52 9e-06
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 51 2e-05
UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 49 8e-05
UniRef50_O83225 Cluster: 30S ribosomal protein S3; n=1; Treponem... 47 3e-04
UniRef50_Q7UN14 Cluster: 30S ribosomal protein S3; n=3; Planctom... 47 3e-04
UniRef50_Q12GW5 Cluster: 30S ribosomal protein S3; n=197; Bacter... 47 4e-04
UniRef50_A1KB21 Cluster: 30S ribosomal protein S3; n=67; cellula... 47 4e-04
UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces cap... 46 6e-04
UniRef50_P46772 Cluster: 30S ribosomal protein S3; n=5; Thermoto... 46 8e-04
UniRef50_A6NXD5 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10; Chlorob... 43 0.006
UniRef50_UPI00015BD7E8 Cluster: UPI00015BD7E8 related cluster; n... 42 0.013
UniRef50_Q6A6N2 Cluster: 30S ribosomal protein S3; n=27; Bacteri... 42 0.017
UniRef50_P0A4C3 Cluster: 30S ribosomal protein S3; n=39; Bacteri... 41 0.022
UniRef50_Q2JFH0 Cluster: 30S ribosomal protein S3; n=94; Bacteri... 41 0.022
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 40 0.051
UniRef50_P46247 Cluster: 30S ribosomal protein S3; n=3; Entomopl... 40 0.068
UniRef50_Q9PQQ4 Cluster: 30S ribosomal protein S3; n=1; Ureaplas... 39 0.090
UniRef50_Q9XD30 Cluster: 30S ribosomal protein S3; n=4; Leptospi... 39 0.090
UniRef50_Q3ZZL8 Cluster: 30S ribosomal protein S3; n=18; Bacteri... 39 0.12
UniRef50_Q2GED3 Cluster: 30S ribosomal protein S3; n=1; Neoricke... 38 0.16
UniRef50_P56798 Cluster: Chloroplast 30S ribosomal protein S3; n... 38 0.27
UniRef50_Q11HQ8 Cluster: 30S ribosomal protein S3; n=167; cellul... 36 0.63
UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n... 36 1.1
UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;... 34 2.6
UniRef50_A5AUQ8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q2RZ88 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8; Euteleos... 33 7.8
UniRef50_Q6YR15 Cluster: 30S ribosomal protein S3; n=163; Firmic... 33 7.8
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 334 bits (821), Expect = 1e-90
Identities = 164/187 (87%), Positives = 171/187 (91%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 19 AELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFG 78
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
PE SV LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVV
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVV 138
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWDQQGKN 623
SGKLRGQRAKSMKFV GLMIHSGDP N YV+TA RHVLLRQGVL IKVKIMLPWD GK
Sbjct: 139 SGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKI 198
Query: 624 GPXKPQP 644
GP KP P
Sbjct: 199 GPKKPLP 205
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 223 bits (546), Expect = 2e-57
Identities = 106/171 (61%), Positives = 131/171 (76%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AELNEF TRELAE GY+GVEVR TP + E+I+ A+ TQ VLGE+GR I ELTS++ KRF
Sbjct: 20 AELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRRIHELTSLIVKRFK 79
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+ + + +YAE+V RGL A QAE+L+ KL+ GL +RRA YGVLRF M +GA+G EVV+
Sbjct: 80 LSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVI 139
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIM 596
SGKLR RAKS K+ G MIHSG P D+++ A RHVL+RQGVL IKVKIM
Sbjct: 140 SGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGIKVKIM 190
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 216 bits (528), Expect = 3e-55
Identities = 104/173 (60%), Positives = 133/173 (76%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AEL EFL RELA+DG++GVE RVTP R+EI+I +T+T+ VLGEKGR IRELT+ +Q+RFN
Sbjct: 70 AELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRRIRELTACLQQRFN 129
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
E + L+AE+V RGL A+AQAESLR+KL+ L VRRA G++R++MESGA+GCEV +
Sbjct: 130 YKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTI 189
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
GK++GQRAKSM F G MI SG +V+TATRH LR G + + VKIM P
Sbjct: 190 GGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRP 242
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 192 bits (469), Expect = 5e-48
Identities = 88/187 (47%), Positives = 126/187 (67%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AELNE LTREL ++GY G EVR TP R+EIII A T+ + GR ++E+ ++QKR+
Sbjct: 20 AELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDNHGRRLQEVRMMIQKRWR 79
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+ E S+ ++ +++ +GL A+ Q ESLRYKLI + RRA Y ++RF+M++GARGCEV +
Sbjct: 80 LKEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAI 139
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWDQQGKN 623
SGKLRG RA + K+ G M+ SGD +V A H+ ++Q + I+V IML D G +
Sbjct: 140 SGKLRGARASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQATIGIRVLIMLAQDPSGIS 199
Query: 624 GPXKPQP 644
GP + QP
Sbjct: 200 GPKESQP 206
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 186 bits (454), Expect = 3e-46
Identities = 81/175 (46%), Positives = 126/175 (72%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AEL+ F ++ L + GY+G+EVR TP ++EI I AT+ Q V+G +G+ +ELT +QKRF
Sbjct: 32 AELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGKKHKELTQFLQKRFG 91
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+ + ++AE + +GLCA AQ E++ YKL+ + VR A +++ +++ GA+GCE+++
Sbjct: 92 YSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIII 151
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWD 608
SGKL+ QRAK+MKF G MI +G P NDY++ A RHV +QG++ +KVKIMLP++
Sbjct: 152 SGKLKQQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIMGVKVKIMLPYE 206
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 181 bits (440), Expect = 2e-44
Identities = 108/187 (57%), Positives = 121/187 (64%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
A LNE LTREL E+GYSG EVRVTP+ +EIII AT+T +VLGEKG+ I+ELTSVVQKRF
Sbjct: 19 AGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGEKGKKIKELTSVVQKRFE 78
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
E SV L AEKV RG AIAQAESLRYKL+GGLA+
Sbjct: 79 FLENSVELCAEKVNNRGFYAIAQAESLRYKLLGGLAM----------------------- 115
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWDQQGKN 623
L QRAKSMKF G +I SG P DY++ A RHV LRQGVL IKVKIM WD +GK
Sbjct: 116 ---LCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHV-LRQGVLGIKVKIMFNWDPKGKQ 171
Query: 624 GPXKPQP 644
P P
Sbjct: 172 SLTTPLP 178
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 169 bits (412), Expect = 4e-41
Identities = 79/187 (42%), Positives = 120/187 (64%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AEL EF + L +G+S +E+R+ +II+ + +GEK +R+ + +R
Sbjct: 30 AELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQFQHLAAQRLE 89
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+P++SV + EKV +GLCA+ QA +R K++GG+ RRA L+ + A+GC+++V
Sbjct: 90 VPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIV 149
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWDQQGKN 623
SGKL+GQRAKS+KF G++IHSGD DY+NT V +QGV+ I+V+IMLP+D +G
Sbjct: 150 SGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVL 209
Query: 624 GPXKPQP 644
GP P P
Sbjct: 210 GPNYPLP 216
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 163 bits (397), Expect = 2e-39
Identities = 90/154 (58%), Positives = 106/154 (68%)
Frame = +3
Query: 168 EIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVXLYAEKVATRGLCAIAQAESLR 347
EIII AT+TQ+VLG+KGR IRELTSVVQKRF E +V LYAEK R AIAQAESLR
Sbjct: 101 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYAIAQAESLR 160
Query: 348 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCND 527
+KL+GGL VRRA YGVL F+MESG +GCEV+ +I SG P D
Sbjct: 161 FKLLGGLVVRRAGYGVLSFVMESGTKGCEVI----------------GWYIISSGQPVKD 204
Query: 528 YVNTATRHVLLRQGVLXIKVKIMLPWDQQGKNGP 629
Y+N+ RHVLL+QGVL IKVKI++ QG+ GP
Sbjct: 205 YINSVVRHVLLKQGVLSIKVKIIVRLGSQGQAGP 238
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 130 bits (315), Expect = 2e-29
Identities = 68/171 (39%), Positives = 102/171 (59%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
++EFL +EL GY G++++ TP+ +++II A V+G GR IRELT +++K+F +
Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILEKQFGLE 76
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
+ + E++ L A QA L L G+ RRA Y LR IM +GARG E+ +SG
Sbjct: 77 NPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSG 134
Query: 450 KLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
KL G+RAKS++F G + G+P V+ LL+ GV+ +KV IM P
Sbjct: 135 KLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIMPP 185
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 130 bits (314), Expect = 3e-29
Identities = 64/173 (36%), Positives = 104/173 (60%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AEL+EF +REL + GY+ + T +II + V+G+ + ++ ++ RF
Sbjct: 25 AELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKIEYLLAGRFM 84
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
++ ++ +K+ RGL A ++LR KL + +RRA Y ++R M +GA GCEV+V
Sbjct: 85 CDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRAGAAGCEVIV 144
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
+GKLR QRA++ KF G +I +G P ++ ATRH+ +RQGV+ +KV+I P
Sbjct: 145 AGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKVRIYNP 197
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 130 bits (313), Expect = 4e-29
Identities = 60/91 (65%), Positives = 72/91 (79%)
Frame = +3
Query: 372 VRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRH 551
VR ACYGVLR+IMESGA+G EVVVSGKLRGQRAK+MKF G MI SG+P DY+ + TRH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 552 VLLRQGVLXIKVKIMLPWDQQGKNGPXKPQP 644
LLRQG + ++VKIML D +G++GP P P
Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGPSTPIP 120
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 111 bits (266), Expect = 2e-23
Identities = 59/173 (34%), Positives = 99/173 (57%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
A ++E+ +L+ GY G+E+ TP+ ++I+I + + V+G+ G+ IR+LT V +++
Sbjct: 15 ASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIRKLTRDVANKYS 74
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+ + A++V L A A L + G R+A + LR +M +GA GCEVV+
Sbjct: 75 LENPQID--AQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVI 132
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
SGKL G R++ KFV G + HSG+P + V+ + + G L KV+I+ P
Sbjct: 133 SGKLTGARSRVEKFVDGYIKHSGNPVEEVVDEGFAVAVKKLGTLGCKVRIIQP 185
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 110 bits (265), Expect = 2e-23
Identities = 62/171 (36%), Positives = 95/171 (55%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
LNE+L R+L Y + TPI +++I+ A V+G KG I+ + V+++ F I
Sbjct: 18 LNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGIE 77
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
+ + +V + L A A + L+ G+ RRA L IM +GARG E+V+SG
Sbjct: 78 NPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISG 135
Query: 450 KLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
KL QR ++ KF G + SG+P + V+ A HVLL+ G+ +KV+IM P
Sbjct: 136 KLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIMKP 186
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 110 bits (264), Expect = 3e-23
Identities = 57/172 (33%), Positives = 103/172 (59%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
+++EF EL GY G++V TP+ ++I++ A + V+G+ G+ IR++T+ ++ RFN+
Sbjct: 16 QIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTELEDRFNL 75
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
+ V + ++V L A A+ L L G R+A + + IMESGA G E+V+S
Sbjct: 76 DDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLS 133
Query: 447 GKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
GK+ G R++ KF G + H+G+P + V++ +++ G + ++VKI+ P
Sbjct: 134 GKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRVKIIPP 185
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 109 bits (262), Expect = 6e-23
Identities = 64/169 (37%), Positives = 99/169 (58%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
+++E+L + GYS VE++ TP+ + +II A R+ +++G +G+ I+++T V+++ F I
Sbjct: 21 KVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIKQITKVLEEWFGI 80
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
P V + KV L A A L L G RRA Y LR IM +GA G +V VS
Sbjct: 81 PNPQVTVV--KVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIMGAGAIGAQVKVS 138
Query: 447 GKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKI 593
GKLRG+RA+ K++ G + SG+ + A HVLL+ GV ++V I
Sbjct: 139 GKLRGERARFEKYIAGKVYKSGNQVVRLTDRAIAHVLLKVGVEGVEVII 187
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 108 bits (260), Expect = 1e-22
Identities = 58/171 (33%), Positives = 95/171 (55%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
+ +FLT+EL GY G+++ TP+ +++ I A + V+G+ G+ +R+LT + ++I
Sbjct: 17 VEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVRQLTQDLATDYDIE 76
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
V + ++V A AE L L G R+A +R IMESGA GCEV+V+G
Sbjct: 77 SPQVEV--QQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIMESGALGCEVIVAG 134
Query: 450 KLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
KL G R+++ KF G + H G+P V + + G + ++VKI+ P
Sbjct: 135 KLTGSRSRTQKFTEGYIKHCGEPSETIVEKGYALAIKKLGTIGVQVKIVPP 185
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 107 bits (258), Expect = 2e-22
Identities = 57/171 (33%), Positives = 96/171 (56%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
++E+L +EL GY G++V+VTP+ + +++ A R V+G G+ +R +T ++ +F++
Sbjct: 16 IDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVRAITQKLKNKFDLE 75
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
V + ++V L A + L G+ RR Y +R IM +GA+G EV +SG
Sbjct: 76 NPQVEV--KEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISG 133
Query: 450 KLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
K+RG R+ + KF G + G+P +V V L+ GVL + V+IM P
Sbjct: 134 KIRGARSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVRIMPP 184
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 105 bits (252), Expect = 9e-22
Identities = 51/171 (29%), Positives = 94/171 (54%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
++E+ +L GYS ++ + TPI + I + A + V+G KG+ ++ELT + +++
Sbjct: 16 IDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLATEYSVK 75
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
+ + ++V L + L G+ R+ + +R +M SGA+G ++VSG
Sbjct: 76 NPQIEV--KQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSG 133
Query: 450 KLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
KL G+R+++ KF+ G M H G+P VN + + L+ G++ + VKIM P
Sbjct: 134 KLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIMRP 184
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 105 bits (252), Expect = 9e-22
Identities = 58/172 (33%), Positives = 96/172 (55%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
EL+E+L EL GY G+ ++ P ++II R +G +GR IR + VQ+RF +
Sbjct: 23 ELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIAIGRRGRNIRRVEEEVQERFPL 82
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
+ V + +++ + L A L L G+ RRA YG LR IM +GA+G +++S
Sbjct: 83 LGR-VSIEVKELPSPELNPRVVARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILS 141
Query: 447 GKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
GKL G RA++ KF+ G + + G+P ++Y+ + + G + + V+IM P
Sbjct: 142 GKLIGARARTEKFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTVRIMPP 193
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 101 bits (241), Expect = 2e-20
Identities = 59/171 (34%), Positives = 93/171 (54%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
+ E++ E+ G+ GV++ TP+ +++ + R V+G+ GR I+ LT + K F I
Sbjct: 17 VKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIKALTEKL-KDFGIE 75
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
V + ++V A A L L G RRA Y L IME+GA+GCE+ +SG
Sbjct: 76 NPQVSV--DEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIMEAGAKGCEIEISG 133
Query: 450 KLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
KL +RA++ KFV G ++H+GDP V + + GVL + V+I+ P
Sbjct: 134 KLVSERARTEKFVAGTIVHTGDPAESMVQKGFDIAIKKLGVLGVSVRIIPP 184
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 97.1 bits (231), Expect = 3e-19
Identities = 58/171 (33%), Positives = 90/171 (52%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
++E+L ++ Y+GVE+ TPI + +II A R ++G+ G+ I++L V++K F +
Sbjct: 18 VDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIKQLAQVLEKFFGLE 77
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
+ + A + L A A L L G RRA + +R IM SGA G EV+VSG
Sbjct: 78 NPQITVTAAE--NPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSG 135
Query: 450 KLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
KL +RAK K G + SG ++ A +L+ GV ++V I P
Sbjct: 136 KLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVVITKP 186
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 95.9 bits (228), Expect = 7e-19
Identities = 54/172 (31%), Positives = 89/172 (51%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
+++E+L ++ Y+GVEV TPI + +II A R ++G GR I++L + +K F +
Sbjct: 17 KIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFGL 76
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
+ + V L A A L L G RRA + +R IM +GA G E+++S
Sbjct: 77 ENPQITI--TNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIIS 134
Query: 447 GKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
GKL +RA+ K G++ SG ++ A +L+ G+ ++V I P
Sbjct: 135 GKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVITKP 186
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 94.3 bits (224), Expect = 2e-18
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
+ EFL L++ GY E+ TP+ + I+I A R ++G KG ++E+++++ + +
Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 83
Query: 270 EQSVXLY-AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
+ + K+ + A + + G+ RR + +R +ME+GA+G E+VVS
Sbjct: 84 NPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVS 143
Query: 447 GKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKI 593
GKL +RA+ K +G + G + V A HVLL+ G+ I+V+I
Sbjct: 144 GKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 92.7 bits (220), Expect = 7e-18
Identities = 55/171 (32%), Positives = 91/171 (53%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
L+EFL + GY+G+E+ TP ++I A ++G G IR+L +++Q F +
Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIRKLMTIMQTHFGL- 78
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
++V + V L A A + L + RR +LR +ME+GA G E+++SG
Sbjct: 79 -ENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVMEAGAVGAEIIISG 137
Query: 450 KLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
KLR +RA+ K G + +GD + V+ A LL++GV ++V I+ P
Sbjct: 138 KLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVIVRP 188
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 87.8 bits (208), Expect = 2e-16
Identities = 50/183 (27%), Positives = 93/183 (50%)
Frame = -1
Query: 596 HDFDLDS*YSLPEKHMSGSSVDVIIARVSRVDHESMYKLH*FGTLTTQLARYNNFTTTGT 417
H+ D D+ +L +H+S +V+ ++ ++RVDHE++ L G+ ++Q +N T T
Sbjct: 82 HNLDSDTQNTLSHQHVSDGNVNKVVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLST 141
Query: 416 RFHDETENTIASTTYSETSDKLVS*RFGLGDSAKTTSSHLFSIQXYRLLWNVESLLYYGS 237
H ++++T+ +++ +T +L FGL S +T+ + +ESL G
Sbjct: 142 SSHGKSQHTVGGSSHWQTVQQLGFQGFGLDSSGQTSLLDSLGVDDNSFRRQLESLDNQGG 201
Query: 236 QLTDXASFLSEHTLCPGGHNNDLRADGSDPHFHAGVAVLGQLPSEELIEFRLENPXSNKF 57
QL D S S++TL G +N+L+ + GV + Q EE ++ +E+ S +
Sbjct: 202 QLVDSTSLFSQNTLGVGSLDNNLQLGWGLSDLNTGVTLFSQFSGEEFVQLGVEDTISYQL 261
Query: 56 SLL 48
S L
Sbjct: 262 SFL 264
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 87.0 bits (206), Expect = 3e-16
Identities = 40/61 (65%), Positives = 45/61 (73%)
Frame = +3
Query: 462 QRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWDQQGKNGPXKPQ 641
QRAKSMKF G M+ SG P +Y+++A RHVLLRQGVL IKVKIML WD GK GP P
Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKLGPKTPL 61
Query: 642 P 644
P
Sbjct: 62 P 62
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 86.6 bits (205), Expect = 5e-16
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
+L EFL + + G+SGVEV P ++I + TR V+G KG IRELT ++K F++
Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME-SGARGCEVVV 443
V + +++ T L + + G A RRA ++ IME A G ++ +
Sbjct: 76 KSPQVDV--KEIETPELYPGVMCNRMASHIERGTAFRRATMWTIQQIMEKKDAMGVQITI 133
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKI 593
SGKLRG R+ K G++ +G + V HV G++ I+++I
Sbjct: 134 SGKLRGDRSAFEKHTSGILPRAGHYADVIVLDDVVHVKTPMGLIGIRIRI 183
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 83.4 bits (197), Expect = 4e-15
Identities = 43/171 (25%), Positives = 89/171 (52%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
+ E+L L + Y ++ T + + I+I+A + ++G KG+ ++ L +++ +FN+
Sbjct: 15 IKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKALADILKSKFNLD 74
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
+ + E +A + + G+ RRA LR + E+ +G EV++SG
Sbjct: 75 NVVIDVIQEPHPEYNARLVALR--IADAMAKGIRFRRAAIIALRQLQEANVQGAEVIISG 132
Query: 450 KLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
KL +R++ K+ G++I +G + V A VLL+ G+ ++V+++ P
Sbjct: 133 KLTTERSRFEKYTTGIVIKAGQDALEKVQEAVIPVLLKPGIFSVRVRVLPP 183
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +3
Query: 405 IMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIK 584
+ ESGA+G E +VSGKL+GQRAKS KFV MIHS D N YV+T+ HVLLRQGVL K
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSK 139
Query: 585 VKIMLPWDQ 611
+ P Q
Sbjct: 140 CRSCFPGTQ 148
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 215
AELNEFLTRELAEDG S VEVRVTP + EIII+ TRTQ+VLGEK
Sbjct: 19 AELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK 62
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/169 (26%), Positives = 90/169 (53%)
Frame = +3
Query: 96 EFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQ 275
E++ +E G+ + ++ TP + I + R V+G +G ++++T ++K++ I
Sbjct: 18 EYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKVQQMTDTLEKKYGIETP 77
Query: 276 SVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 455
+ + + V L A+ + L G + R+A L +++GA+G + +SGK+
Sbjct: 78 QIEV--KDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKI 135
Query: 456 RGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
G+RA+ KF++G + +SG+P + + T L+ G+L + VKI+ P
Sbjct: 136 SGERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTVKILNP 184
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 81.0 bits (191), Expect = 2e-14
Identities = 48/171 (28%), Positives = 85/171 (49%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
+ E+L RE G+ G+E TP +++ + A + V+G +G+ I EL ++ F +
Sbjct: 21 VREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQYRLKSDFKL- 79
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
++ L ++ L A A L L G RRA + + IM++GARGC +++SG
Sbjct: 80 -ENPRLEVNEIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLIILSG 138
Query: 450 KLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
K+ G R + KF G + G+ +++ + + G + V+IM P
Sbjct: 139 KISGPRHRVQKFQQGHIKFCGETALQFMDEGFSTAVKKLGTVGCTVRIMRP 189
>UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 149
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +3
Query: 111 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSV 245
+++EDGYSGV+VRVTP+R EIII ATRTQ+ LGEK R IREL V
Sbjct: 16 DISEDGYSGVQVRVTPMRMEIIIHATRTQNALGEKRRRIRELILV 60
>UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 286
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +3
Query: 111 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVV 248
++ EDGYS V+VRVTP+ EII+ ATRTQ+ L EKGR IRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +3
Query: 111 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSV 245
++ EDGYS V+VRVTP+ EIII ATRTQ+ L EKGR IRELT V
Sbjct: 406 DILEDGYSDVKVRVTPMGMEIIIRATRTQNALSEKGRRIRELTLV 450
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +3
Query: 111 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 206
++ EDGYS ++V+VT +R EIII ATRTQ+ L
Sbjct: 281 DIPEDGYSDIKVKVTGMRMEIIIHATRTQNAL 312
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = +3
Query: 375 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHV 554
R + LRF++ SG RGC + + G R +R K+ KF GL+ HSG ND++++ + ++
Sbjct: 158 RSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDSDSFYL 217
Query: 555 LLRQGVLXIKVKIM 596
++G L I +KIM
Sbjct: 218 NKKRGTLGINIKIM 231
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 60.9 bits (141), Expect = 3e-08
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ + + ++LA G + +E+ + +II A + V+G+ G I+EL +++ +
Sbjct: 38 QIRQLINKKLAAAGIARIEIERAGQQVNVIISAAKPGVVIGKGGESIKELRGDIERL--V 95
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
+V + ++ + A A + ++ A RRA + +MESGARG +V++S
Sbjct: 96 SAGTVAVNVAEIPNPNISAPLVALRIAEQIERRFAFRRAMKQAAQRVMESGARGVKVILS 155
Query: 447 GKLRG-QRAKSMKFVHG-LMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKI 593
G+L G ++A++ K + G + +H+ DY R G+L IKV +
Sbjct: 156 GRLGGAEQARTEKVLEGRVPLHTLRADIDYGTALAR---TTYGILGIKVLV 203
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 59.7 bits (138), Expect = 6e-08
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = +3
Query: 96 EFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQ 275
EF+ L S V +R TPI + +II + R + + E+ + +L ++ +F + +
Sbjct: 21 EFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEERKAHLAKL---LELKFGLEKP 77
Query: 276 SVXLYAEKVATRGLCAIAQAESLRYKLIGGL-AVRRACYGVLRFIMESGARGCEVVVSGK 452
+ + + L A AE L + + A RR L IM +GA G E+V++G+
Sbjct: 78 VIEVLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIMNAGAIGAEIVIAGR 135
Query: 453 LRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLP 602
L GQR K+ +F G + +G ++ A L+ GV I V I+ P
Sbjct: 136 LSGQRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHVTILKP 185
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 52.4 bits (120), Expect = 9e-06
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
+ + ++L LA+ S + + I I R ++G+ G+ + +L +++
Sbjct: 36 SRIRQYLNARLAKASVSRIVIERALKLVTITICTARPGMIIGKAGQEVDKLKEELKR--- 92
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
I ++ V + ++ L A AE++ +L G +A RRA + M GA G ++ V
Sbjct: 93 ITKKDVQINIYEIRKPELDAAIVAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQV 152
Query: 444 SGKLRG-QRAKSMKFVHG-LMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKI 593
SG+L G + A+S F G +H+ DY A L + G+L IKV I
Sbjct: 153 SGRLNGAEMARSEMFKEGRTPLHTLRADIDY---ALAEALTKVGLLGIKVWI 201
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +3
Query: 111 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQ 251
++ EDGYS ++V+VT + EIII AT+TQ+ L E GR +RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9;
Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma
mobile
Length = 225
Score = 51.2 bits (117), Expect = 2e-05
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +3
Query: 171 IIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVXLYAEKVATRGLCAIAQAESLRY 350
+++ + + ++LG+ G I +LT +QK E + + + L AI AE +
Sbjct: 67 VLVHSAKPGAILGQNGENINKLTQDIQKLLRNKELKLNIEVVNIKNPDLNAIILAEQIAI 126
Query: 351 KLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVHGLM 500
KL R A +R M+SGA+G + VSG+L G A+S + G M
Sbjct: 127 KLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSEGEM 177
>UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter
sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp.
BAL39
Length = 281
Score = 49.2 bits (112), Expect = 8e-05
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ ++L+ +A+ G + V + T R + I R V+G+ G+ + ++ ++K +
Sbjct: 37 KIRKYLSARIAKGGVAKVVIERTLKRITVTIHTARPGIVIGKAGQEVDKIKEELKK---L 93
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
++ + + ++ L A AE + +L ++ RRA + M GA G +++ S
Sbjct: 94 TKKEIQINIFEIKRPELDAQLVAEGVAKQLEARISFRRAMKSTIAATMRMGAEGIKIMTS 153
Query: 447 GKLRG-QRAKSMKFVHG-LMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKI 593
G+L G + A+S ++ G + +H+ DY A L G + +KV I
Sbjct: 154 GRLGGAEMARSEQYKEGRIPLHTFRADIDY---ALAEALTTYGKIGVKVWI 201
>UniRef50_O83225 Cluster: 30S ribosomal protein S3; n=1; Treponema
pallidum|Rep: 30S ribosomal protein S3 - Treponema
pallidum
Length = 247
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/108 (28%), Positives = 56/108 (51%)
Frame = +3
Query: 138 VEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVXLYAEKVATRGL 317
VE+ P R +++ R V+G KG I ++ + VQKR N + V + +++ L
Sbjct: 57 VEIVRHPQRVTVVMHTARPGVVIGAKGVNIEKIGAEVQKRLN---KKVQIKVKEIKRMEL 113
Query: 318 CAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 461
A A+++ +L ++ R+ M+SGA+G ++ VSG+L G
Sbjct: 114 NAYLVAQNVARQLTARVSFRKCLRQACAGTMKSGAQGVKIRVSGRLGG 161
>UniRef50_Q7UN14 Cluster: 30S ribosomal protein S3; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S3 -
Rhodopirellula baltica
Length = 236
Score = 47.2 bits (107), Expect = 3e-04
Identities = 34/130 (26%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Frame = +3
Query: 87 ELNEFLTRELAEDGY--SGVE-VRVTPIRSEIIIM--ATRTQSVLGEKGRXIRELTSVVQ 251
++ EF+T+ + Y +G++ + + R E+ +M R ++G+KG+ I L + +Q
Sbjct: 38 KIREFITKHPKKSQYKSAGIDRIEIERTRDEVRVMLYVARPGLIIGKKGQEIEILQAELQ 97
Query: 252 KRFNIPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 431
N+ + + L E+V L A AE + +L + RR +L M++GA+G
Sbjct: 98 ---NLVGRRINLKVEEVGRPELQAQLVAEDISQQLAKRSSFRRTMKRMLEQTMDAGAKGI 154
Query: 432 EVVVSGKLRG 461
++ ++G+L G
Sbjct: 155 KIQMAGRLGG 164
>UniRef50_Q12GW5 Cluster: 30S ribosomal protein S3; n=197;
Bacteria|Rep: 30S ribosomal protein S3 - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 301
Score = 46.8 bits (106), Expect = 4e-04
Identities = 33/125 (26%), Positives = 59/125 (47%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ E+L +L S V + + I I + R V+G+KG I L + ++ +
Sbjct: 38 KVREYLKAKLKNAAVSRVLIERPAKNARITIFSARPGVVIGKKGEDIENLKKELSRQLGV 97
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
P V + E+V + A A+S+ +L + RRA ++ M GA G +++ S
Sbjct: 98 P---VAVNIEEVRKPEIDAKLIADSITQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSS 154
Query: 447 GKLRG 461
G+L G
Sbjct: 155 GRLNG 159
>UniRef50_A1KB21 Cluster: 30S ribosomal protein S3; n=67; cellular
organisms|Rep: 30S ribosomal protein S3 - Azoarcus sp.
(strain BH72)
Length = 260
Score = 46.8 bits (106), Expect = 4e-04
Identities = 32/125 (25%), Positives = 60/125 (48%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ ++L + LA V + + + + + R V+G+KG I L +QK +
Sbjct: 38 KVRDYLKKRLAHASVGRVVIERPAKNARVTLFSARPGVVIGKKGEDIEALKRDLQKIVGV 97
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
P V + E+V + A A+S+ +L + RRA ++ M GA+G +++ S
Sbjct: 98 P---VHVNIEEVRKPEIDAKLIADSIAQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSS 154
Query: 447 GKLRG 461
G+L G
Sbjct: 155 GRLNG 159
>UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 151
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEII 176
A LN F RELAE+GYSGVEVRVTP ++II
Sbjct: 99 AGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>UniRef50_P46772 Cluster: 30S ribosomal protein S3; n=5;
Thermotogaceae|Rep: 30S ribosomal protein S3 -
Thermotoga maritima
Length = 209
Score = 46.0 bits (104), Expect = 8e-04
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEV-RVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
E+ + + + G S + V R R I + R ++G KG I L ++++FN
Sbjct: 37 EIRKIIKNKYYHAGISEIYVERPDAERINITVKTARPGIIIGRKGSEITSLREELERKFN 96
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+ V + E++ T L A AES+ ++ + + A + M GA+G +V+V
Sbjct: 97 ---RRVVINIEEIKTPELDAQLVAESIASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMV 153
Query: 444 SGKLRG-QRAKSMKFVHG-LMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKI 593
+G+L G + A+ ++ G L + DY TAT + G + IKV I
Sbjct: 154 AGRLGGAEIARREWYLRGRLPLQKIKAIIDY-GTAT--AWTKYGTIGIKVWI 202
>UniRef50_A6NXD5 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 283
Score = 43.2 bits (97), Expect = 0.006
Identities = 34/135 (25%), Positives = 57/135 (42%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ +FL + G +E+ + I + R V+G+ G I L ++K
Sbjct: 38 KIRDFLKKTQYGAGIPKIEIERDNAKVRIYLHCARPGVVIGKGGEAIEALRLQLEKMLG- 96
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
+SV L +V + A AE++ +L + RRA + M GARG + VS
Sbjct: 97 --KSVALNIVEVKNPDMDAQLIAENIAQQLEKRIGFRRAMKNAMGRAMRMGARGIKTQVS 154
Query: 447 GKLRGQRAKSMKFVH 491
G+L G + H
Sbjct: 155 GRLGGAEIARTEHYH 169
>UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10;
Chlorobiaceae|Rep: 30S ribosomal protein S3 - Chlorobium
tepidum
Length = 253
Score = 43.2 bits (97), Expect = 0.006
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Frame = +3
Query: 126 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVXLYAEKVA 305
G + + + T +I I A R +++G KG I L+ Q+ I + V + +V
Sbjct: 53 GIAKIVIERTTKHIKINIYAARPGAIVGHKGEEINNLS---QELTRITGKEVKIDVIEVI 109
Query: 306 TRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMK 482
+ A E++ Y+L ++ RRA ++ M +GA G + +G+L G + A++ +
Sbjct: 110 KPEIEAQLIGENIAYQLENRVSFRRAMKMAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQ 169
Query: 483 FVHG-LMIHSGDPCNDYVNTATRHVLLRQGVLXIKV 587
+ G + +H+ DY + T H + G + IKV
Sbjct: 170 YKEGKIPLHTLRANVDYA-SVTAHTI--AGAIGIKV 202
>UniRef50_UPI00015BD7E8 Cluster: UPI00015BD7E8 related cluster; n=1;
unknown|Rep: UPI00015BD7E8 UniRef100 entry - unknown
Length = 231
Score = 41.9 bits (94), Expect = 0.013
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 2/170 (1%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
+ +++ G S V + + + + I++++ ++G KG + +L + +++ +
Sbjct: 39 IRKYIKERYKSAGISKVTIERSGEKIRVRILSSKPGIIIGRKGAEVDQLKNDLERI--VK 96
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
+ + L ++V L A AE + ++ ++ RRA + ++SGA+G +V V G
Sbjct: 97 NKDISLSVDEVRVPQLDAQLVAEDIALQIERRVSHRRAMKRAIDNAIKSGAKGIKVQVKG 156
Query: 450 KLRG-QRAKSMKFVHGLM-IHSGDPCNDYVNTATRHVLLRQGVLXIKVKI 593
++ G A++ F+ G M + + DY AT + + G+L IKV I
Sbjct: 157 RIGGADLARAEWFLVGRMPLQTLRADIDY-GYATAYT--KYGILGIKVWI 203
>UniRef50_Q6A6N2 Cluster: 30S ribosomal protein S3; n=27;
Bacteria|Rep: 30S ribosomal protein S3 -
Propionibacterium acnes
Length = 269
Score = 41.5 bits (93), Expect = 0.017
Identities = 31/125 (24%), Positives = 55/125 (44%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ E+L + L G S +E+ R I + A R V+G G + ++K +
Sbjct: 37 KIREWLHKNLERAGLSSIEIERRSERVTIFLYAARPGIVIGRNGAEAERVRGELEK---L 93
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
+ + L +V + A A+ + +L +A RRA + M +GA G + S
Sbjct: 94 TGKQIQLNILEVKSPETDAQLVAQGIAEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCS 153
Query: 447 GKLRG 461
G+L G
Sbjct: 154 GRLGG 158
>UniRef50_P0A4C3 Cluster: 30S ribosomal protein S3; n=39;
Bacteria|Rep: 30S ribosomal protein S3 - Streptococcus
pneumoniae
Length = 217
Score = 41.1 bits (92), Expect = 0.022
Identities = 29/124 (23%), Positives = 59/124 (47%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIP 269
+ +F+ +ELA+ S +E+ + + + + V+G+ G + L + + K +
Sbjct: 38 IRKFVQKELADAAVSTIEIERAVNKVNVSLHTAKPGMVIGKGGANVDALRAKLNK---LT 94
Query: 270 EQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 449
+ V + ++ L A E + +L +A RRA ++ M +GA+G + VSG
Sbjct: 95 GKQVHINIIEIKQPDLDAHLVGEGIARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSG 154
Query: 450 KLRG 461
+L G
Sbjct: 155 RLNG 158
>UniRef50_Q2JFH0 Cluster: 30S ribosomal protein S3; n=94;
Bacteria|Rep: 30S ribosomal protein S3 - Frankia sp.
(strain CcI3)
Length = 315
Score = 41.1 bits (92), Expect = 0.022
Identities = 31/133 (23%), Positives = 60/133 (45%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ + ++R + G S V++ T R + I R V+G +G + ++K +
Sbjct: 37 KIRKMMSRGMERAGISRVDIERTQGRLRVDIHTARPGIVIGRRGAEADRIRGDLEK---L 93
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
+ V L +V + A A+ + +L ++ RRA ++ M+ GA+G V S
Sbjct: 94 TGKQVQLNILEVKNPEVDAQLVAQGVAEQLSSRVSFRRAMRKAMQTAMKGGAKGIRVQCS 153
Query: 447 GKLRGQRAKSMKF 485
G+L G +F
Sbjct: 154 GRLGGAEMSRSEF 166
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 39.9 bits (89), Expect = 0.051
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEV-RVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQK---R 257
+ ++L L + + + R P R + I + V+G G + L S + K
Sbjct: 39 IRKYLETNLKDAAVDRITIERTEPTRINLTIHTAKPGIVIGRGGADVERLRSELSKIVDT 98
Query: 258 FNIPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEV 437
+ + V + ++ L A + + L +A RRA G ++ + +GA+G
Sbjct: 99 YKGQHKRVNINIVEIRKPDLNAHLVGQQIAADLERRVAFRRAMRGAIQRVQRAGAKGVRT 158
Query: 438 VVSGKLRG 461
+VSG+L G
Sbjct: 159 MVSGRLNG 166
>UniRef50_P46247 Cluster: 30S ribosomal protein S3; n=3;
Entomoplasmatales|Rep: 30S ribosomal protein S3 -
Mesoplasma florum (Acholeplasma florum)
Length = 241
Score = 39.5 bits (88), Expect = 0.068
Identities = 29/137 (21%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ E + + L + S +++ T +II R VLG++G+ + + + VQK
Sbjct: 38 KIREGVLKLLKDAAVSKIKIERTNSNITLIIRTARPAIVLGQEGKNVSNIATAVQKIAKD 97
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
V + +V A A + ++ + R +R +++G +G + VS
Sbjct: 98 RNLKVEVKVIEVKNPDADATLVARWIGEQITNRASFRTVQKLAIRKALKAGVKGIKTSVS 157
Query: 447 GKLRG-QRAKSMKFVHG 494
G+L G + A++ ++ G
Sbjct: 158 GRLGGVEMARTEGYIEG 174
>UniRef50_Q9PQQ4 Cluster: 30S ribosomal protein S3; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S3 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 257
Score = 39.1 bits (87), Expect = 0.090
Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 2/171 (1%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ ++L+ + G VE+ R + + A ++ ++G + + + + K
Sbjct: 39 KIRKYLSTKYKNAGIDHVEIERDQQRVNVYVYAVQSGLLIGTEASEKKLIELAINKIVG- 97
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
+Q V L +V L A A + + ++ R A V++ ++++GARG + VS
Sbjct: 98 RKQLVSLKVVEVQIPELQASLMAREIADAIENRVSFRIAQKMVIKKVLKAGARGIKTHVS 157
Query: 447 GKLRG-QRAKSMKFVHGLM-IHSGDPCNDYVNTATRHVLLRQGVLXIKVKI 593
G+L G + A+ + G+M +H+ DY + + G++ +KV I
Sbjct: 158 GRLGGVEMAREEGYTQGVMTLHTLRADIDY---SMQEAHTTYGIIGVKVWI 205
>UniRef50_Q9XD30 Cluster: 30S ribosomal protein S3; n=4;
Leptospira|Rep: 30S ribosomal protein S3 - Leptospira
interrogans
Length = 225
Score = 39.1 bits (87), Expect = 0.090
Identities = 27/125 (21%), Positives = 53/125 (42%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ +F+ G V + P + + + + V+G+KG I + +++ +
Sbjct: 37 KIRKFVQNRFNNAGVVKVVIERFPEKINVNLHTAKPGIVIGQKGANIEAVKKILKTMTDK 96
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
P + +K T C AES+ ++ RR LR M G G ++++S
Sbjct: 97 PVNLNIIEVKKPETVAQCI---AESIALQIEQRQPFRRVMKQELRRAMRGGVEGIKILIS 153
Query: 447 GKLRG 461
G+L G
Sbjct: 154 GRLNG 158
>UniRef50_Q3ZZL8 Cluster: 30S ribosomal protein S3; n=18;
Bacteria|Rep: 30S ribosomal protein S3 - Dehalococcoides
sp. (strain CBDB1)
Length = 278
Score = 38.7 bits (86), Expect = 0.12
Identities = 27/135 (20%), Positives = 64/135 (47%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
+L + ++++ + S V++ + + + R V+G G+ + E+ ++ ++
Sbjct: 38 KLRKAISKKYVDAAISQVDIERQSNKVTVSVRTARPGIVIGRGGQRVDEMRHFLE---DL 94
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
+ V L +++ L A A S+ ++ +A RRA + M++GA+G ++ S
Sbjct: 95 IGKKVQLNIVEISQAELDAFLVARSVAEQIERRVAYRRAMKQAIFRSMQAGAKGIKICAS 154
Query: 447 GKLRGQRAKSMKFVH 491
G+L G + +H
Sbjct: 155 GRLGGVEIARREVMH 169
>UniRef50_Q2GED3 Cluster: 30S ribosomal protein S3; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S3 - Neorickettsia sennetsu (strain Miyayama)
Length = 211
Score = 38.3 bits (85), Expect = 0.16
Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Frame = +3
Query: 90 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN-I 266
+ +++ A G S V ++ +I + + ++G+KG + + K+F +
Sbjct: 39 VTKYVESSFAHIGISKVIIKRKGASCDITLHCMKPGLIIGKKGADLESFRLKLNKKFGFV 98
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM-ESGARGCEVVV 443
P +V +V A+ A+S+ ++L + RR + +M ES +G +V
Sbjct: 99 PSLNVV----EVKKPNSSAVLVAKSIAFQLEKRSSFRRVIKKAIATVMRESDVKGVKVAC 154
Query: 444 SGKLRG-QRAKSMKFVHG-LMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKI 593
SG+L G + A++ F G + +H+ DY A H GV+ +KV I
Sbjct: 155 SGRLSGAEIARTEVFKEGSIPLHTMRADIDYW-VAEAHT--TYGVIGVKVWI 203
>UniRef50_P56798 Cluster: Chloroplast 30S ribosomal protein S3;
n=78; Streptophyta|Rep: Chloroplast 30S ribosomal
protein S3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 218
Score = 37.5 bits (83), Expect = 0.27
Identities = 31/161 (19%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Frame = +3
Query: 123 DGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVXLYAEKV 302
+G + +E++ +III + ++ +K R + EL VQK N + + + ++
Sbjct: 58 EGIARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRI 117
Query: 303 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 482
+ AE + +L ++ R+A + ++ +G +V ++G++ G+ ++
Sbjct: 118 SNPYGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVE 177
Query: 483 FVH--GLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIML 599
++ + + + + DY + R + GVL IK+ I +
Sbjct: 178 WIREGRVPLQTIEAKIDYCSYTVRTI---YGVLGIKIWIFV 215
>UniRef50_Q11HQ8 Cluster: 30S ribosomal protein S3; n=167; cellular
organisms|Rep: 30S ribosomal protein S3 - Mesorhizobium
sp. (strain BNC1)
Length = 235
Score = 36.3 bits (80), Expect = 0.63
Identities = 29/125 (23%), Positives = 55/125 (44%)
Frame = +3
Query: 87 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI 266
++ ++ EL + S V + + + I + R ++G+KG I +L + + N
Sbjct: 38 KIRTYIENELKQAAISKVVIERPHKKCRVTIHSARPGLIIGKKGADIEKLRRKITQMTNA 97
Query: 267 PEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 446
L +V + A A+S+ +L +A RRA ++ M GA G + +
Sbjct: 98 ---ETHLNIVEVRKPEIDARLIAQSIAQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCT 154
Query: 447 GKLRG 461
G+L G
Sbjct: 155 GRLGG 159
>UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n=2;
Chlorophyta|Rep: Chloroplast 30S ribosomal protein S3 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 235
Score = 35.5 bits (78), Expect = 1.1
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = +3
Query: 138 VEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNI-----PEQSVXLYAEKV 302
VEV + R +++ R +K + +R+ V +F P V L V
Sbjct: 66 VEVEIRTTRPGLLVGRKRQNC---DKLKQLRDELQVELNKFRAKNGVSPTAKVALQVTTV 122
Query: 303 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 461
+ AI AE L +L +A RRA VL I +G ++ VSG+L G
Sbjct: 123 QNKSSEAIVIAEFLVNQLERRIAFRRALRRVLSIIQRDRVQGAKIQVSGRLNG 175
>UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 328
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 329 PGRISKIQAYRRSRCTSCLLWCSPFHH 409
PGR +A RRSRC+ C W HH
Sbjct: 240 PGRDWSAEASRRSRCSRCCTWSGDIHH 266
>UniRef50_A5AUQ8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 617
Score = 33.9 bits (74), Expect = 3.4
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 174 IIMATRTQSVLGEK-GRXIRELTSVVQKRFNIPEQSVXLYAEKVATRGLCAIAQAESLRY 350
+I TRT S+ + + IREL SV Q +I + A A RGL A+ ES+R
Sbjct: 101 VIRQTRTLSMTSAQFPKKIRELQSVTQSYVSIDATTKDKAAALAAARGLGRNAKIESVRL 160
Query: 351 KLIGGLAVRRACYGVLRFIMESGARG 428
++ L + +C G+ M + + G
Sbjct: 161 PMLTVLKL-HSCEGITSASMAAISHG 185
>UniRef50_Q2RZ88 Cluster: Putative uncharacterized protein; n=1;
Salinibacter ruber DSM 13855|Rep: Putative
uncharacterized protein - Salinibacter ruber (strain DSM
13855)
Length = 363
Score = 32.7 bits (71), Expect = 7.8
Identities = 25/91 (27%), Positives = 38/91 (41%)
Frame = +3
Query: 255 RFNIPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCE 434
R++ S + R + +A E Y L RR C GV R +E G
Sbjct: 263 RYDRGPDSTAQNVRRRTVRVVGPLAPRELAAYDLRLPNEARRPCVGVRRVRVER-LDGTT 321
Query: 435 VVVSGKLRGQRAKSMKFVHGLMIHSGDPCND 527
VV + + G+R K + G + ++GD C D
Sbjct: 322 VVSAPRRPGRRPKRGRLARGALPYAGDDCLD 352
>UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8;
Euteleostomi|Rep: Transmembrane protein 56 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 264
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 384 CYGVLRFI-MESGARGCEVVVSGKLRGQRAKSMK 482
C +L I M ARGC V++GKL+G++A S K
Sbjct: 222 CLDILNIIWMYKIARGCYKVITGKLKGRKADSKK 255
>UniRef50_Q6YR15 Cluster: 30S ribosomal protein S3; n=163;
Firmicutes|Rep: 30S ribosomal protein S3 - Onion yellows
phytoplasma
Length = 252
Score = 32.7 bits (71), Expect = 7.8
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Frame = +3
Query: 162 RSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQSVXLYAEKVATRGLCAIAQAES 341
R I + + ++G+ G +L V K + ++ V L +V A+ A++
Sbjct: 67 RITISVHTAKPGVIIGKDGDTRNKL---VAKLKELTQKDVNLNVLEVKNSDKIALLIAQN 123
Query: 342 LRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVHG-LMIHSGD 515
+ +L + RR ++ +++GA+G + ++SG+L G + A+S G + +H+
Sbjct: 124 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 183
Query: 516 PCNDYVNTATRHVLLRQGVLXIKVKI 593
DY A GVL IKV I
Sbjct: 184 ADIDY---AAVEAHTTYGVLGIKVWI 206
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,101,024
Number of Sequences: 1657284
Number of extensions: 12118331
Number of successful extensions: 31165
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 30127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31117
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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