Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_D02
(644 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal prot... 326 2e-89
BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p pro... 326 2e-89
AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p pro... 326 2e-89
AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA... 326 2e-89
X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal prot... 318 4e-87
AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila d... 30 3.1
AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown prot... 30 3.1
AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF... 30 3.1
AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE... 30 3.1
AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD... 30 3.1
AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC... 30 3.1
AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB... 30 3.1
AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA... 30 3.1
AE014298-2726|AAF48847.1| 494|Drosophila melanogaster CG15046-P... 29 7.1
>L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal protein
S3/AP endonucleaseDNA repair protein protein.
Length = 246
Score = 326 bits (800), Expect = 2e-89
Identities = 158/187 (84%), Positives = 168/187 (89%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR IRELT++VQKRFN
Sbjct: 21 AELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFN 80
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+ LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GCEVVV
Sbjct: 81 FETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVV 140
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWDQQGKN 623
SGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLLRQGVL IKVK+MLP+D + K
Sbjct: 141 SGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKI 200
Query: 624 GPXKPQP 644
GP KP P
Sbjct: 201 GPKKPLP 207
>BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p
protein.
Length = 253
Score = 326 bits (800), Expect = 2e-89
Identities = 158/187 (84%), Positives = 168/187 (89%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR IRELT++VQKRFN
Sbjct: 28 AELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFN 87
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+ LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GCEVVV
Sbjct: 88 FETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVV 147
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWDQQGKN 623
SGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLLRQGVL IKVK+MLP+D + K
Sbjct: 148 SGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKI 207
Query: 624 GPXKPQP 644
GP KP P
Sbjct: 208 GPKKPLP 214
>AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p
protein.
Length = 246
Score = 326 bits (800), Expect = 2e-89
Identities = 158/187 (84%), Positives = 168/187 (89%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR IRELT++VQKRFN
Sbjct: 21 AELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFN 80
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+ LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GCEVVV
Sbjct: 81 FETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVV 140
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWDQQGKN 623
SGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLLRQGVL IKVK+MLP+D + K
Sbjct: 141 SGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKI 200
Query: 624 GPXKPQP 644
GP KP P
Sbjct: 201 GPKKPLP 207
>AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA
protein.
Length = 246
Score = 326 bits (800), Expect = 2e-89
Identities = 158/187 (84%), Positives = 168/187 (89%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AELNEFLTRELAEDGYSGVEVRVTP R+EIIIMAT+TQ VLGEKGR IRELT++VQKRFN
Sbjct: 21 AELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFN 80
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+ LYAEKVA RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGA+GCEVVV
Sbjct: 81 FETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVV 140
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWDQQGKN 623
SGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLLRQGVL IKVK+MLP+D + K
Sbjct: 141 SGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKI 200
Query: 624 GPXKPQP 644
GP KP P
Sbjct: 201 GPKKPLP 207
>X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal protein
S3 protein.
Length = 246
Score = 318 bits (781), Expect = 4e-87
Identities = 155/187 (82%), Positives = 165/187 (88%)
Frame = +3
Query: 84 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFN 263
AELNEFLTRELAEDGYSGVEVRVTP +EIIIMAT+TQ VL EKGR IRELT++VQKRFN
Sbjct: 21 AELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGRRIRELTAMVQKRFN 80
Query: 264 IPEQSVXLYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 443
+ LYAEKVA RGLCAIAQAESLRYKL G LAVRRACYGVLR+IMESGA+GCEVVV
Sbjct: 81 FETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGAKGCEVVV 140
Query: 444 SGKLRGQRAKSMKFVHGLMIHSGDPCNDYVNTATRHVLLRQGVLXIKVKIMLPWDQQGKN 623
SGKLRGQRAKSMKFV GLMIHSGDPCNDYV TATRHVLLRQGVL IKVK+MLP+D + K
Sbjct: 141 SGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKI 200
Query: 624 GPXKPQP 644
GP KP P
Sbjct: 201 GPKKPLP 207
>AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila
dodeca-satellite protein1 protein.
Length = 1301
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 153 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 278
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown
protein.
Length = 1301
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 153 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 278
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF,
isoform F protein.
Length = 1301
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 153 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 278
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE,
isoform E protein.
Length = 1301
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 153 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 278
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD,
isoform D protein.
Length = 1301
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 153 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 278
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC,
isoform C protein.
Length = 1301
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 153 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 278
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB,
isoform B protein.
Length = 1301
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 153 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 278
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA,
isoform A protein.
Length = 1301
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 153 TPIRSEIIIMATRTQSVLGEKGRXIRELTSVVQKRFNIPEQS 278
T ++ + + +LG+ G+ +RE+ V R NIP QS
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQS 208
>AE014298-2726|AAF48847.1| 494|Drosophila melanogaster CG15046-PA
protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +1
Query: 37 TXFQRSENLLEXGFXXXXXXXXXXXXWPRTATPAWKCGSLPS 162
T QRS +L+ G+ P P W CG LP+
Sbjct: 364 TRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWACGDLPN 405
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,259,936
Number of Sequences: 53049
Number of extensions: 577894
Number of successful extensions: 1956
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1956
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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