BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_C15
(651 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 26 0.23
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 26 0.23
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 26 0.23
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 26 0.23
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 25 0.54
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 25 0.54
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 25 0.54
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 24 0.94
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 24 0.94
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.2
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 23 2.9
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 23 2.9
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 6.7
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 21 8.8
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.23
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 594 WFDFLKNITSLLFDFIVCFRKFSDRYEMTPSIILY*GHCVVRNFIIV 454
W F NI +LF +VCF S+ ++ + IL G+ ++ +IV
Sbjct: 944 WTSFYYNIIPILFFMLVCFTCKSN-IQLIVAQILSTGYALIMMAVIV 989
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.23
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 594 WFDFLKNITSLLFDFIVCFRKFSDRYEMTPSIILY*GHCVVRNFIIV 454
W F NI +LF +VCF S+ ++ + IL G+ ++ +IV
Sbjct: 944 WTSFYYNIIPILFFMLVCFTCKSN-IQLIVAQILSTGYALIMMAVIV 989
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.23
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 594 WFDFLKNITSLLFDFIVCFRKFSDRYEMTPSIILY*GHCVVRNFIIV 454
W F NI +LF +VCF S+ ++ + IL G+ ++ +IV
Sbjct: 944 WTSFYYNIIPILFFMLVCFTCKSN-IQLIVAQILSTGYALIMMAVIV 989
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.23
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 594 WFDFLKNITSLLFDFIVCFRKFSDRYEMTPSIILY*GHCVVRNFIIV 454
W F NI +LF +VCF S+ ++ + IL G+ ++ +IV
Sbjct: 944 WTSFYYNIIPILFFMLVCFTCKSN-IQLIVAQILSTGYALIMMAVIV 989
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 25.0 bits (52), Expect = 0.54
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 364 QSKIQELNTIEEKQIALNMPRYYGW 438
++ I+ L + +QIAL +PRY W
Sbjct: 252 ETMIKCLKSRPARQIALTVPRYQAW 276
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 25.0 bits (52), Expect = 0.54
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 364 QSKIQELNTIEEKQIALNMPRYYGW 438
++ I+ L + +QIAL +PRY W
Sbjct: 252 ETMIRCLKSRPARQIALTVPRYQAW 276
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 481 MPLVQYYTRSHFIPVAKLP 537
+PL + T H P+A+LP
Sbjct: 4 VPLAIFLTLCHAEPIAELP 22
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 25.0 bits (52), Expect = 0.54
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 364 QSKIQELNTIEEKQIALNMPRYYGW 438
++ I+ L + +QIAL +PRY W
Sbjct: 252 ETMIKCLKSRPARQIALTVPRYQAW 276
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 24.2 bits (50), Expect = 0.94
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 373 IQELNTIEEKQIALNMPRYYGW 438
I+ L + +QIAL +PRY W
Sbjct: 255 IKCLKSRPARQIALTVPRYQAW 276
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 24.2 bits (50), Expect = 0.94
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 373 IQELNTIEEKQIALNMPRYYGW 438
I+ L + +QIAL +PRY W
Sbjct: 255 IKCLKSRPARQIALTVPRYQAW 276
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 163 LIYGYIELQFDMHIIKLHRSLLKIKN 240
++YG+ L F+ I+K H S N
Sbjct: 1430 IVYGFAVLDFENLIVKAHDSWADFDN 1455
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 279 FFKSRNSRVSWNGILYFQ 226
FF+ +N +V W G FQ
Sbjct: 276 FFEEKNGKVVWEGFGDFQ 293
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 22.6 bits (46), Expect = 2.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 234 YFQ**SV*FNYMHIELQFDIPINQN 160
YFQ F+Y+ I LQFD+ +N
Sbjct: 339 YFQICGSAFSYLFIMLQFDLNNKKN 363
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.4 bits (43), Expect = 6.7
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -1
Query: 606 IFYLWFDFLKNITSLLFD 553
IF+ DFL N+ +++++
Sbjct: 226 IFFATLDFLDNVDTIMYE 243
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 210 FNYMHIELQFDIPINQN 160
F+Y+ I LQFD+ +N
Sbjct: 362 FSYLFIMLQFDLNNKKN 378
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,434
Number of Sequences: 336
Number of extensions: 2651
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -