Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_C14
(451 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 114 1e-24
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 109 2e-23
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 98 9e-20
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 97 2e-19
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 95 6e-19
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 81 1e-14
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 80 3e-14
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 78 8e-14
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 73 3e-12
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 72 7e-12
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 65 8e-10
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 64 2e-09
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 59 4e-08
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 59 5e-08
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 59 5e-08
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 56 4e-07
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 56 4e-07
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 55 8e-07
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 55 8e-07
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 54 2e-06
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 52 6e-06
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 48 7e-05
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 44 0.002
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 38 0.13
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.31
UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis s... 36 0.41
UniRef50_Q752S4 Cluster: Pre-mRNA-splicing factor CWC24; n=1; Er... 35 0.94
UniRef50_Q5B7I5 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_A6PNL8 Cluster: Integral membrane sensor signal transdu... 33 2.9
UniRef50_A4QU02 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 3.8
UniRef50_A7RAU7 Cluster: Putative uncharacterized protein c143R;... 32 5.0
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 32 5.0
UniRef50_Q4PDH4 Cluster: Putative uncharacterized protein; n=1; ... 32 5.0
UniRef50_A4QR34 Cluster: Putative uncharacterized protein; n=1; ... 32 5.0
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 32 5.0
UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing ... 32 6.6
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 6.6
UniRef50_Q9XV16 Cluster: Putative uncharacterized protein; n=2; ... 31 8.8
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 31 8.8
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 114 bits (274), Expect = 1e-24
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 323
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 324 LRFNTRVRFEXRYKSGKNKWFFQKLRF 404
R +V+FE RYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 64.1 bits (149), Expect = 1e-09
Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 4/56 (7%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGTS----AQAVRACLRRWYRQVPPA 156
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS + A+ A + R+ R+V A
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAA 56
Score = 37.5 bits (83), Expect = 0.13
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 107 KPYGHAFVAGIDRYPRQSAQEDGKE*NPQEVQDKAF 214
+PY HA VAGIDRYPR+ GK+ + + K+F
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 71
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 109 bits (263), Expect = 2e-23
Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 323
P KV K MGK KI KR+K+KPF+KVV+Y HL+PTRY+VD +F+K + + LK P+K++K
Sbjct: 50 PLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRK 109
Query: 324 LRFNTRVRFEXRYKSGKNKWFFQKLRF 404
+ +FE RYK+GKNKWFF KLRF
Sbjct: 110 ALVEVKSKFEERYKTGKNKWFFTKLRF 136
Score = 59.3 bits (137), Expect = 4e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGTS 102
MGK MKPGKVVLVL G+YAGRKA+VVK DEG S
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVS 34
Score = 31.9 bits (69), Expect = 6.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 107 KPYGHAFVAGIDRYPRQSAQEDGKE 181
+ Y HA +AGIDRYP + ++ GK+
Sbjct: 36 RTYPHAIIAGIDRYPLKVTKDMGKK 60
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 97.9 bits (233), Expect = 9e-20
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 323
P KV K+ G K+ KR+KIKPF+KVVNYNHL+PTRYT+D K S + + P++R++
Sbjct: 50 PSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREE 109
Query: 324 LRFNTRVRFEXRYKSGKNKWFFQKLRF 404
+ + FE R+++GKN+WFF KLRF
Sbjct: 110 AKKVVKKAFEERHQAGKNQWFFSKLRF 136
Score = 46.0 bits (104), Expect = 4e-04
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSA 105
M K +K GKV +V+ GRYAG+K ++VK +DEG+ +
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKS 35
Score = 33.5 bits (73), Expect = 2.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 110 PYGHAFVAGIDRYPRQSAQEDGKE*NPQEVQDKAF 214
P+GHA VAGI+RYP + ++ G + + + K F
Sbjct: 37 PFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPF 71
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 97.1 bits (231), Expect = 2e-19
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 323
P KV KRMG KI KRSK+KPFVKV++YNHLMPTRY ++ K + K+P++R+
Sbjct: 104 PQKVTKRMGAKKIAKRSKVKPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQRED 163
Query: 324 LRFNTRVRFEXRYKSGKNKWFFQKLRF 404
+ + FE +Y SGKNKWFF LRF
Sbjct: 164 AKKQIKQIFEEKYTSGKNKWFFTPLRF 190
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 95.1 bits (226), Expect = 6e-19
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 323
P KV +RMGK + KRS+IKPF+K+VNYNHLMPTRYT++ K S + K+ + R+
Sbjct: 100 PLKVTRRMGKKMVEKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTRED 159
Query: 324 LRFNTRVRFEXRYKSGKNKWFFQKLRF 404
+ + E RY SGKN+WFF LRF
Sbjct: 160 AKKTVKKALEDRYTSGKNRWFFTPLRF 186
Score = 38.3 bits (85), Expect = 0.076
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 7 KXMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSA 105
K MK G+V ++ GRYAG+K ++V+ D G+ A
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKA 85
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 80.6 bits (190), Expect = 1e-14
Identities = 35/85 (41%), Positives = 54/85 (63%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLR 329
P KV + M K I +RS++ F++VVN+ H +PTRY +D S E ++ D +K+ + +
Sbjct: 49 PKKVVRGMSKRTIQRRSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSK 108
Query: 330 FNTRVRFEXRYKSGKNKWFFQKLRF 404
R F+ RY +G N+WFFQ+LRF
Sbjct: 109 QLVRKLFQARYNAGSNRWFFQRLRF 133
Score = 47.6 bits (108), Expect = 1e-04
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +1
Query: 7 KXMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSAQAVRACLRRWYRQVPPAKCTRGWER 180
K +KPGKVV+V SGRYAG+KA++V+N D + + L ++ P K RG +
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKY-PKKVVRGMSK 58
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 79.8 bits (188), Expect = 3e-14
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +3
Query: 156 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRK-KLRF 332
+V K+M + K KRSK K F+K +NY+HLMPTRYT+D +F+ D+ D A +K +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 333 NTRVRFEXRYKSGKNKWFFQKLRF 404
+ E R+K+GK++WFF +L F
Sbjct: 161 EAKKLLEERFKTGKSRWFFTRLAF 184
Score = 51.6 bits (118), Expect = 8e-06
Identities = 21/30 (70%), Positives = 28/30 (93%)
Frame = +1
Query: 16 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSA 105
+PGKVV+VL+GRYAG+KA++VKN D+G SA
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSA 53
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 78.2 bits (184), Expect = 8e-14
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLR 329
P KV + M K I +RS++ F++VVN+ H +PTRY VD S E ++ D +KR + +
Sbjct: 50 PKKVVRGMSKQTIARRSQVGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSK 109
Query: 330 FNTRVRFEXRYKSGKNKWFFQKLRF 404
R F+ RY +G + WFFQ+LRF
Sbjct: 110 RLVRHVFQARYNAGSSMWFFQRLRF 134
Score = 48.4 bits (110), Expect = 7e-05
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSAQAVRACLRRWYRQVPPAKCTRGWER 180
M K +KPGKVV+V +GRYAG KA++V+N D T + L ++ P K RG +
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKY-PKKVVRGMSK 59
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 72.9 bits (171), Expect = 3e-12
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK-FS------AKDLKDP 308
P + + M + I KR+ I+ FVKVVNYNH+MPTRY + E F+ +
Sbjct: 53 PRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQV 112
Query: 309 AKRKKLRFNTRVRFEXRYKSGKNKWFFQKLRF 404
AKR R + FE ++K+GK+KWFF KLRF
Sbjct: 113 AKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144
Score = 49.2 bits (112), Expect = 4e-05
Identities = 17/35 (48%), Positives = 32/35 (91%)
Frame = +1
Query: 7 KXMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSAQA 111
K +KPG++V++L+G+YAGRKA+V+K +D+ T++++
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKS 38
Score = 34.3 bits (75), Expect = 1.2
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 107 KPYGHAFVAGIDRYPR 154
+PYGH VAGID+YPR
Sbjct: 39 RPYGHCLVAGIDKYPR 54
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 71.7 bits (168), Expect = 7e-12
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-FSFEK---FSAKDLKDPAKR 317
P KV MGK K +R+++K F K +NYNHLM TRY+V F +K F K+ + R
Sbjct: 50 PRKVTATMGKKKFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDR 109
Query: 318 KKLRFNTRVRFEXRYKSGKNKWFFQKLRF 404
K+ + + R+ + KN+WFF KLRF
Sbjct: 110 KEFKKELQTVMRERFLAAKNRWFFTKLRF 138
Score = 50.8 bits (116), Expect = 1e-05
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGTS----AQAVRACLRRWYRQVPPAKCTR 168
MGK +KP +V LVL+GR+AG+K +V+K YD GTS A A + R+ R+V +
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 169 GWER 180
+ER
Sbjct: 61 KFER 64
Score = 40.3 bits (90), Expect = 0.019
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 107 KPYGHAFVAGIDRYPRQSAQEDGKE*NPQEVQDKAF 214
+PY HAFV GIDRYPR+ GK+ + + KAF
Sbjct: 36 RPYAHAFVVGIDRYPRKVTATMGKKKFERRTRVKAF 71
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 64.9 bits (151), Expect = 8e-10
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 18/103 (17%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKD 305
P KV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+
Sbjct: 949 PRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKN 1008
Query: 306 PAKRKKLRFNTRVRFEXRY----------KSGKNKWFFQKLRF 404
KRK+LR N R +Y K ++++ F KLRF
Sbjct: 1009 VEKRKELRKNLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 1051
Score = 46.8 bits (106), Expect = 2e-04
Identities = 18/33 (54%), Positives = 29/33 (87%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 99
MGK +KPG+++++L+GRYAG+KAI++K +E T
Sbjct: 900 MGKFLKPGRLIVLLAGRYAGKKAILIKANEETT 932
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 63.7 bits (148), Expect = 2e-09
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKD 305
P KV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+
Sbjct: 160 PRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKEAELKN 219
Query: 306 PAKRKKLRFNTRVRFEXRY----------KSGKNKWFFQKLRF 404
KRK LR N R +Y K ++++ F KLRF
Sbjct: 220 VEKRKDLRKNLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 262
Score = 31.9 bits (69), Expect = 6.6
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAG 60
MGK +KPG++V++L+GR AG
Sbjct: 64 MGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 59.3 bits (137), Expect = 4e-08
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFE 278
P KVHKR+ K K+ K+S IKPF+K +N NH+MPTRY V DF +
Sbjct: 67 PLKVHKRLSKEKLKKKSTIKPFLKSINMNHVMPTRYVVSDFDIK 110
Score = 47.2 bits (107), Expect = 2e-04
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 99
M K MK G+VV++L+GRYAG+KA+VV ++ GT
Sbjct: 18 MAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGT 50
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 58.8 bits (136), Expect = 5e-08
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK---FSAKDLKDPAKRK 320
P KV K+M KI KR K+K FVK VN NHLMPTRY V + + S + +++ + RK
Sbjct: 50 PMKVTKKMSSKKIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRK 109
Query: 321 KLRFNTRVRFEXRYKSGKN 377
+ R + + E + + +N
Sbjct: 110 EARKSVKAVLEECFSNPEN 128
Score = 45.2 bits (102), Expect = 7e-04
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSAQAVRACLRRWYRQVP 150
MGK +KPG+VV++LSGR AG KA+VV+ + + + CL + P
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAP 50
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 58.8 bits (136), Expect = 5e-08
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGTS 102
MGK MK GKVVLVL GRYAGRKAI++K +D+GTS
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTS 34
Score = 39.1 bits (87), Expect = 0.044
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVK 221
P +V +RM K ++HKRSKIKPF+K
Sbjct: 50 PRRVTRRMNKTRLHKRSKIKPFIK 73
Score = 34.3 bits (75), Expect = 1.2
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 107 KPYGHAFVAGIDRYPRQSAQEDGK 178
K +GHA VAGIDRYPR+ + K
Sbjct: 36 KQFGHALVAGIDRYPRRVTRRMNK 59
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +3
Query: 147 TPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTR 254
+P KV KRMG KI KR+ +KPF+K VN NH+MPTR
Sbjct: 64 SPKKVTKRMGSKKIQKRTSVKPFIKYVNLNHIMPTR 99
Score = 43.6 bits (98), Expect = 0.002
Identities = 16/32 (50%), Positives = 28/32 (87%)
Frame = +1
Query: 4 GKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 99
G+ +K G+VV++L GR+AG+KA++VK+ ++GT
Sbjct: 17 GRGLKYGRVVILLQGRFAGKKAVIVKSSEDGT 48
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 56.0 bits (129), Expect = 4e-07
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV---DFSFEKFSAKD----LKDP 308
P KV K M + K++++K FVK VN+NH+M TR+ V DF F+K S + LKD
Sbjct: 49 PKKVTKDMPTEVLVKKTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDA 107
Query: 309 AKRKKLRFNTRVRFEXRYKSGKNKWFFQKLRF 404
+K L +Y + K WFF+ L+F
Sbjct: 108 PAKKALLTEYAAVLRQKYLNNKMAWFFKPLQF 139
Score = 36.3 bits (80), Expect = 0.31
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +1
Query: 13 MKPGKVVLVLSGRYAGRKAIVVKNYDEGT 99
++ G+ V++L GR+AG+KA+V+ Y EGT
Sbjct: 4 LQAGRFVVMLQGRHAGKKAVVLAAYPEGT 32
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 54.8 bits (126), Expect = 8e-07
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS-AKDLK----DPAK 314
P K+ ++M R+ +K F KV+N NH+MPT+YTV + E+F+ K +K + K
Sbjct: 50 PLKITRKMSAKVQEMRTSVKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGK 107
Query: 315 RKKLRFNTRV--RFEXRYKSGKNKWFFQKLRF 404
+ + +F Y+ GK W F KLRF
Sbjct: 108 VYPISQKKAISSQFAEEYRKGKESWLFTKLRF 139
Score = 40.3 bits (90), Expect = 0.019
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +1
Query: 1 MGKXMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 99
M K + PG+VV++LSGR+AG+KA+V +GT
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGT 33
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 54.8 bits (126), Expect = 8e-07
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = +3
Query: 174 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 353
G+ + +R + +P V + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 354 XRYKSGKNKWFFQKLRF 404
KSG+NKWFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 257
P KV K+M K KI KRSK+K FVK +N NH++PTRY
Sbjct: 142 PLKVTKKMSKGKIIKRSKVKAFVKYINVNHILPTRY 177
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +1
Query: 13 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSAQAVRACL 126
+KPGKVV++L+GR AG+KAI++ Y+ T + CL
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCL 134
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 52.0 bits (119), Expect = 6e-06
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF-SAKDLKDPAKRKKL 326
P ++ M + R +++ FVK +N NHLMPT ++ +++ F S + + D KR+++
Sbjct: 48 PRRITNSMSDEEAVCRGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREI 107
Query: 327 RFNTRVRFEXRYKSGKNKWFFQKL 398
F+ R ++ WFF KL
Sbjct: 108 IETVNKDFQRRILEHRDTWFFTKL 131
Score = 34.3 bits (75), Expect = 1.2
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = +1
Query: 13 MKPGKVVLVLSGRYAGRKAIVVK 81
+KPG V +VL GR+AG+KA++V+
Sbjct: 6 IKPGLVCIVLQGRHAGKKAVIVE 28
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 48.4 bits (110), Expect = 7e-05
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +3
Query: 150 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK 281
P K+ +GK KI KRSKIK FV V NYNHL RY+VD +K
Sbjct: 35 PRKLTAALGK-KISKRSKIKFFVAVYNYNHLKSIRYSVDIPLDK 77
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Frame = +3
Query: 156 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-----------FSFEKFSAKDLK 302
K+ M K KI + K F+K +N H+ PTRY ++ + K K +
Sbjct: 50 KIKYNMSKRKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNE 109
Query: 303 DPAKRKKLRF-NTRVRFEXRYKSGKNKWFFQKLRF 404
++ K+ + + R GKN WFF+K++F
Sbjct: 110 HTNEKAKVNLVSINNYLQDRLLRGKNLWFFKKMKF 144
Score = 38.7 bits (86), Expect = 0.058
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1
Query: 16 KPGKVVLVLSGRYAGRKAIVVKN 84
K G+VV+VLSG+YAG+KA V+KN
Sbjct: 6 KTGRVVIVLSGKYAGKKAFVLKN 28
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 37.5 bits (83), Expect = 0.13
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 192 KRSKIKPFVKVVNYN--HLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEXRY 362
KR K ++ + YN HL+ TRY D ++D A+ KK+ N T+ +
Sbjct: 53 KRRNAKFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAW 112
Query: 363 KSGKNKWFFQKLRF 404
K K K+ F L F
Sbjct: 113 KENKAKFLFSSLSF 126
Score = 33.5 bits (73), Expect = 2.2
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 19 PGKVVLVLSGRYAGRKAIVVKNYDE 93
P +V+V SG+ AG+KA+V+K DE
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE 29
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 36.3 bits (80), Expect = 0.31
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 7 KXMKPGKVVLVLSGRYAGRKAIVVKNYDEG 96
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis
serovar tenebrionis|Rep: Helicase - Bacillus
thuringiensis subsp. tenebrionis
Length = 767
Score = 35.9 bits (79), Expect = 0.41
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = -3
Query: 356 LFKTYSRVETQLLTLSRVFQV-FCAEFFKTEVNCITCWHQVIVVYNLDERLYLGPLVDFI 180
LF+ Y + + LT+ + F ++FF+ E N I C + +I ++ R L L+ +
Sbjct: 445 LFREYDLQDYKSLTIHKTCASNFNSKFFRNEYNIIDCAYLIIDEVSMIPREILSKLLQAV 504
Query: 179 LSHPLVHFAGGTCRYQRRRHARTACAEVPSS*FLTTIALRPAYR 48
SH + FAG + + E+ + F+ T+ L +R
Sbjct: 505 PSHVKIIFAGDDAQLPPVNDT-SIIPELEALEFVNTVRLTQVFR 547
>UniRef50_Q752S4 Cluster: Pre-mRNA-splicing factor CWC24; n=1;
Eremothecium gossypii|Rep: Pre-mRNA-splicing factor
CWC24 - Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 250
Score = 34.7 bits (76), Expect = 0.94
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 180 SFPSSCALCRGYLSIPATKACPYGLCGGTF 91
S P C LCRG+ P C + CGG F
Sbjct: 153 SIPFRCVLCRGHYRAPVRTRCGHYFCGGCF 182
>UniRef50_Q5B7I5 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1480
Score = 34.3 bits (75), Expect = 1.2
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +3
Query: 138 STGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR 317
S+ TP + +R+G + S IK ++ V +H++PTRY + A L A R
Sbjct: 920 SSDTPADILQRLGDVNVSTMSHIKQQLEQVMPHHMVPTRYQIWARMPTSLAGKLDRKALR 979
Query: 318 KKL 326
K+L
Sbjct: 980 KEL 982
>UniRef50_A6PNL8 Cluster: Integral membrane sensor signal
transduction histidine kinase precursor; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Integral membrane
sensor signal transduction histidine kinase precursor -
Victivallis vadensis ATCC BAA-548
Length = 626
Score = 33.1 bits (72), Expect = 2.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 22 GKVVLVLSGRYAGRKAIVVKNYDEGTSAQAVRACLRRWYR 141
GK+ L L+ R GR I V++Y G A A R++YR
Sbjct: 533 GKLDLTLAARADGRWTIAVRDYGPGIPAAAAEKIFRKFYR 572
>UniRef50_A4QU02 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 537
Score = 33.1 bits (72), Expect = 2.9
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Frame = +3
Query: 69 YRSQELRRRYLRTSRTGMPSSLVSTGTPGKVHKRMGKNKIHKRSKIKPFVKVV-NYNHLM 245
+ QEL S G P T P KV + NKIH R+ P ++V+ N L+
Sbjct: 302 FTEQELYSLIAGLSYLGDPRMRFPTENPRKVGNIVNNNKIHFRNLYAPLIRVLPNVRFLV 361
Query: 246 PTRYTVDFSFEKFSAKDLKDPAKRKKLR-----FNTRVRFEXRYK 365
T D + + + + D + +R F +RV F+ + K
Sbjct: 362 DDPETADPAQDLRMRQAMSDETRGNMVRRLPKQFRSRVYFQYQKK 406
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 246 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 332
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_A7RAU7 Cluster: Putative uncharacterized protein c143R;
n=1; Chlorella virus AR158|Rep: Putative uncharacterized
protein c143R - Chlorella virus AR158
Length = 80
Score = 32.3 bits (70), Expect = 5.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 365 FVPLFKTYSRVETQLLTLSRVFQVFCAEFFKTEVNCI 255
F+P+ K + + +L L R F +F E F VNC+
Sbjct: 41 FLPVSKMSDMLSSMILLLRRNFLIFSVEIFSRSVNCV 77
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 32.3 bits (70), Expect = 5.0
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 7 KXMKPGKVVLVLSGRYAGRKAIVVK 81
K PG + ++L+GR+ GR+A+++K
Sbjct: 31 KSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_Q4PDH4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 546
Score = 32.3 bits (70), Expect = 5.0
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 86 TTKVPPHKPYGHAFVAGIDRYPRQSAQEDGKE*NPQEVQDKAFRQGCKLQSLDANTLYS 262
TT++PP P F+ PR + + E NP+E D+ F + LD +++++
Sbjct: 269 TTRLPPWTPLNDEFL------PRHRSSQSSTELNPEEEVDRVFDASASVGDLDLSSVFA 321
>UniRef50_A4QR34 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 356
Score = 32.3 bits (70), Expect = 5.0
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +3
Query: 105 TSRTGMPSSLVSTGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF 284
T T +PS T K K+ GK K ++R ++KP ++ ++ + Y +D+ E
Sbjct: 264 TEITSLPSLETDAKTKKKKKKKGGKGK-NRRQEVKPDLRKRTWDVVDVGMYNLDYDGEAG 322
Query: 285 SAKDLKDPAKRKK 323
SA + AKR++
Sbjct: 323 SASHEGNLAKRRQ 335
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 32.3 bits (70), Expect = 5.0
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 237 HLMPTRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEXRYKSGKNKW 383
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
motor domain containing protein - Tetrahymena thermophila
SB210
Length = 974
Score = 31.9 bits (69), Expect = 6.6
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 177 KNKIHKRSKIKPFV--KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKL 326
K + +K + F+ K++ YN P YT +F +EK ++ KRK++
Sbjct: 867 KCQFYKNKEEPQFICNKILEYNEYSPHYYTCEFGYEKCDIQECSKLIKRKEI 918
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 31.9 bits (69), Expect = 6.6
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +1
Query: 19 PGKVVLVLSGRYAGRKAIVVKNYDEG 96
PG V+++L+GR+ G++ +++K D+G
Sbjct: 41 PGTVLILLAGRFRGKRVVLLKALDQG 66
>UniRef50_Q9XV16 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 190
Score = 31.5 bits (68), Expect = 8.8
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 258 YNVLASSDCSLQP*RKALS-WTSCGFY-SFPSSCALCRGYLSIPAT 127
Y + C++ P + W +C F+ + P SC LC G ++ PAT
Sbjct: 92 YQKICPKTCNVCPPAICVDQWDNCPFFKNCPLSCGLCTGNVTTPAT 137
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 31.5 bits (68), Expect = 8.8
Identities = 9/28 (32%), Positives = 23/28 (82%)
Frame = +1
Query: 13 MKPGKVVLVLSGRYAGRKAIVVKNYDEG 96
++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 58 LQPGTILILLAGRFRGKRVILLKHLGQG 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,408,916
Number of Sequences: 1657284
Number of extensions: 8090424
Number of successful extensions: 25017
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 24346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24997
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -