Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_C13
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 203 3e-51
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 167 2e-40
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 159 5e-38
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 152 8e-36
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 137 2e-31
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 137 2e-31
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 130 4e-29
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 121 2e-26
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 119 7e-26
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 105 9e-22
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 105 9e-22
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 103 4e-21
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 103 4e-21
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 99 5e-20
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 99 1e-19
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 98 1e-19
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 97 4e-19
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 97 4e-19
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 96 7e-19
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 94 2e-18
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 93 4e-18
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 93 5e-18
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 93 5e-18
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 93 5e-18
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 93 7e-18
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 91 2e-17
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 91 2e-17
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 90 5e-17
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 90 5e-17
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 89 7e-17
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 89 7e-17
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 89 7e-17
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 89 9e-17
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 89 9e-17
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 88 2e-16
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 88 2e-16
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 87 3e-16
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 87 3e-16
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 87 3e-16
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 87 3e-16
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 87 3e-16
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 87 5e-16
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 87 5e-16
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 86 6e-16
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 86 6e-16
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 86 6e-16
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 86 6e-16
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 86 8e-16
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 85 1e-15
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 85 1e-15
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 85 1e-15
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 85 2e-15
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 84 2e-15
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 84 2e-15
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 84 3e-15
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 84 3e-15
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 84 3e-15
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 83 4e-15
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 83 4e-15
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 83 6e-15
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 83 6e-15
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 83 6e-15
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 83 7e-15
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 83 7e-15
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 83 7e-15
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 82 1e-14
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 82 1e-14
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 82 1e-14
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 82 1e-14
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 82 1e-14
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 82 1e-14
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 82 1e-14
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 81 2e-14
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 81 2e-14
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 81 2e-14
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 81 2e-14
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 81 2e-14
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 81 2e-14
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 81 2e-14
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 81 2e-14
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 81 2e-14
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 81 2e-14
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 81 3e-14
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 81 3e-14
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 81 3e-14
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 81 3e-14
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 80 4e-14
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 80 4e-14
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 80 4e-14
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 80 5e-14
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 80 5e-14
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 80 5e-14
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 80 5e-14
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 80 5e-14
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 80 5e-14
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 80 5e-14
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 79 7e-14
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 79 7e-14
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 79 9e-14
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 79 9e-14
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 79 9e-14
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 79 9e-14
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 79 9e-14
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 79 9e-14
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 79 9e-14
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 79 9e-14
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 79 9e-14
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 79 1e-13
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 78 2e-13
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 78 2e-13
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 78 2e-13
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 78 2e-13
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 78 2e-13
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 78 2e-13
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 78 2e-13
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 78 2e-13
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 78 2e-13
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 78 2e-13
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 78 2e-13
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 78 2e-13
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 77 3e-13
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 77 3e-13
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 77 3e-13
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 77 4e-13
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 77 4e-13
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 77 5e-13
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 77 5e-13
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 77 5e-13
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 77 5e-13
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 77 5e-13
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 77 5e-13
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 76 6e-13
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 76 6e-13
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 76 9e-13
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 76 9e-13
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 76 9e-13
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 76 9e-13
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 76 9e-13
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 76 9e-13
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 76 9e-13
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 76 9e-13
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 75 1e-12
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 75 1e-12
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 75 1e-12
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 75 1e-12
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 75 1e-12
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 75 1e-12
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 75 1e-12
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 75 1e-12
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 1e-12
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 75 1e-12
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 75 1e-12
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 75 1e-12
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 75 1e-12
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 75 2e-12
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 75 2e-12
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 75 2e-12
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 75 2e-12
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 75 2e-12
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 75 2e-12
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 75 2e-12
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 75 2e-12
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 75 2e-12
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 74 3e-12
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 74 3e-12
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 74 3e-12
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 74 3e-12
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 74 3e-12
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 74 3e-12
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 74 3e-12
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 74 3e-12
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 74 3e-12
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 74 3e-12
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 74 3e-12
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 74 3e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 74 3e-12
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 74 3e-12
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 74 3e-12
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 73 5e-12
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 73 5e-12
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 73 5e-12
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 73 5e-12
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 73 5e-12
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 73 5e-12
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 6e-12
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 73 6e-12
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 73 6e-12
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 73 6e-12
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 73 6e-12
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 73 8e-12
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 73 8e-12
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 73 8e-12
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 73 8e-12
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 73 8e-12
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 73 8e-12
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 72 1e-11
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 72 1e-11
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 72 1e-11
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 72 1e-11
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 72 1e-11
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 72 1e-11
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 72 1e-11
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 72 1e-11
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 71 2e-11
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 71 2e-11
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 71 2e-11
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 71 2e-11
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 71 2e-11
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 2e-11
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 71 2e-11
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 71 2e-11
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 71 2e-11
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 71 2e-11
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 71 2e-11
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 71 2e-11
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 71 3e-11
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 71 3e-11
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 71 3e-11
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 71 3e-11
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 71 3e-11
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 71 3e-11
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 71 3e-11
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 71 3e-11
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 71 3e-11
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 71 3e-11
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 70 4e-11
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 70 4e-11
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 70 4e-11
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 70 4e-11
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 70 4e-11
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 70 4e-11
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 70 4e-11
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 70 4e-11
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 70 4e-11
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 70 6e-11
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 70 6e-11
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 70 6e-11
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 70 6e-11
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 70 6e-11
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 70 6e-11
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 70 6e-11
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 69 7e-11
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 69 7e-11
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 69 7e-11
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 7e-11
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 69 7e-11
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 69 7e-11
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 69 1e-10
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 69 1e-10
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 69 1e-10
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 69 1e-10
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 69 1e-10
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 69 1e-10
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 69 1e-10
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 69 1e-10
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 69 1e-10
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 69 1e-10
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 69 1e-10
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 69 1e-10
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 69 1e-10
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 69 1e-10
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 69 1e-10
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 69 1e-10
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 69 1e-10
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 68 2e-10
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 68 2e-10
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 68 2e-10
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 68 2e-10
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 68 2e-10
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 68 2e-10
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 68 2e-10
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 68 2e-10
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 68 2e-10
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 2e-10
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 68 2e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 68 2e-10
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 68 2e-10
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 67 3e-10
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 67 3e-10
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 67 3e-10
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 67 3e-10
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 67 3e-10
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 67 3e-10
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 67 3e-10
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 67 3e-10
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 67 4e-10
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 67 4e-10
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 67 4e-10
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 67 4e-10
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 66 5e-10
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 66 5e-10
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 66 5e-10
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 66 5e-10
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 66 5e-10
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 66 5e-10
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 66 5e-10
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 66 5e-10
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 66 5e-10
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 66 5e-10
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 66 5e-10
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 66 5e-10
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 66 7e-10
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 66 7e-10
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 66 7e-10
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 66 7e-10
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 66 7e-10
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 66 7e-10
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 66 7e-10
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 66 7e-10
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 66 7e-10
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 66 7e-10
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 66 7e-10
UniRef50_Q6BZR4 Cluster: ATP-dependent RNA helicase DBP9; n=1; Y... 66 7e-10
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 66 7e-10
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 66 9e-10
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 66 9e-10
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 66 9e-10
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 66 9e-10
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 65 1e-09
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 65 1e-09
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 1e-09
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 65 1e-09
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 65 1e-09
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 65 1e-09
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 65 1e-09
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 65 2e-09
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 2e-09
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 65 2e-09
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 2e-09
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 65 2e-09
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 65 2e-09
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 65 2e-09
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 65 2e-09
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 64 2e-09
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 64 2e-09
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 64 2e-09
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 64 2e-09
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 64 2e-09
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 64 2e-09
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 64 2e-09
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 64 2e-09
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 64 2e-09
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 64 3e-09
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 64 3e-09
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 64 3e-09
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 3e-09
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 64 3e-09
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 64 3e-09
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 64 3e-09
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 4e-09
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 64 4e-09
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 63 5e-09
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 5e-09
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 63 5e-09
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 63 5e-09
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 63 5e-09
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 63 5e-09
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 63 5e-09
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 63 5e-09
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 63 5e-09
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 63 5e-09
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 63 5e-09
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 63 6e-09
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 63 6e-09
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 63 6e-09
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 63 6e-09
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 63 6e-09
UniRef50_Q2GSJ4 Cluster: Putative uncharacterized protein; n=2; ... 63 6e-09
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 63 6e-09
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 62 9e-09
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 62 9e-09
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 62 9e-09
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 62 9e-09
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 9e-09
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 9e-09
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 9e-09
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 62 9e-09
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 1e-08
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 1e-08
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 62 1e-08
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 62 1e-08
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 62 1e-08
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 62 1e-08
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 62 1e-08
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 62 1e-08
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 62 1e-08
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 62 1e-08
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 62 1e-08
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 62 1e-08
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 62 1e-08
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 62 1e-08
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 62 1e-08
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 61 2e-08
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 2e-08
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 2e-08
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 61 2e-08
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 61 2e-08
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 61 2e-08
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 61 2e-08
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 61 2e-08
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 61 2e-08
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 61 2e-08
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 61 3e-08
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 61 3e-08
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 61 3e-08
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 61 3e-08
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 61 3e-08
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 61 3e-08
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 56 3e-08
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 60 3e-08
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 60 3e-08
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 60 3e-08
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 60 3e-08
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 60 3e-08
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 60 3e-08
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 60 3e-08
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 60 3e-08
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 60 3e-08
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 60 3e-08
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 60 3e-08
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 60 3e-08
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 60 3e-08
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 60 5e-08
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 60 5e-08
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 60 5e-08
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 60 5e-08
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 60 5e-08
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 60 5e-08
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 60 5e-08
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 60 5e-08
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 60 5e-08
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_Q0DVX2 Cluster: DEAD-box ATP-dependent RNA helicase 50;... 60 5e-08
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 60 5e-08
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 6e-08
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 60 6e-08
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 60 6e-08
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 60 6e-08
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 60 6e-08
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 59 8e-08
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 59 8e-08
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 59 8e-08
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 59 8e-08
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 59 8e-08
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 59 8e-08
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 59 8e-08
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 59 8e-08
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 59 8e-08
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 59 8e-08
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 59 8e-08
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 59 8e-08
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 59 8e-08
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 59 1e-07
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 59 1e-07
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 59 1e-07
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 59 1e-07
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 59 1e-07
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 59 1e-07
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 59 1e-07
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 59 1e-07
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 59 1e-07
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 58 1e-07
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 58 1e-07
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 58 1e-07
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 58 1e-07
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 58 1e-07
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 203 bits (495), Expect = 3e-51
Identities = 96/136 (70%), Positives = 115/136 (84%)
Frame = +1
Query: 145 MTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 324
M +S + + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 325 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVI 504
R+I I+KGRDVIAQ+QSGTGKTATFSIS+LQ LD +RETQ LIL+PTRELA QI K +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGL 126
Query: 505 LALGDFMNVQCHACIG 552
LALGD+MNVQCHACIG
Sbjct: 127 LALGDYMNVQCHACIG 142
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 548 LGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+GGTN+G DIRKLDYGQHVV+GTPG VFDMIRRR
Sbjct: 141 IGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRR 174
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 167 bits (406), Expect = 2e-40
Identities = 77/108 (71%), Positives = 90/108 (83%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
E++ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 409 SILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
SILQ L+ +ETQ L+L+PTRELA QI KVILALGD+M CHACIG
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIG 137
Score = 40.7 bits (91), Expect = 0.030
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 548 LGGTNLGXDIRKLDY-GQHVVSGTPGXVFDMIRRR 649
+GGTN+ +++KL H+V GTPG VFDM+ RR
Sbjct: 136 IGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRR 170
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 159 bits (386), Expect = 5e-38
Identities = 79/157 (50%), Positives = 109/157 (69%)
Frame = +1
Query: 70 SDSKRFSPYRITC*FKNLEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFD 249
S SK YR+ K++ A M + +D + F+T+E VE+I +FD
Sbjct: 223 SKSKEIGRYRVR--EKSMAATATTSMVPANRGGCRNSAVDD-EKLVFETTEGVELIMSFD 279
Query: 250 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 429
MG++++LLRGIY Y FEKPSA+QQR++LPI++G DVIAQAQSGTGKT+ F++++ Q +D
Sbjct: 280 QMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTSMFALTVYQMVD 339
Query: 430 TTLRETQVLILSPTRELATQIXKVILALGDFMNVQCH 540
T+ RE Q LI SPTRELA+Q KVILA+GD +N+Q H
Sbjct: 340 TSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 152 bits (368), Expect = 8e-36
Identities = 79/136 (58%), Positives = 98/136 (72%)
Frame = +1
Query: 145 MTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 324
M +S + + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 325 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVI 504
R+I I+KGRDVIAQ+QSGTGKTATFS+S+LQ LD + +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLD---------------------IQGL 105
Query: 505 LALGDFMNVQCHACIG 552
LALGD+MNVQCHACIG
Sbjct: 106 LALGDYMNVQCHACIG 121
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 548 LGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+GGTN+G DIRKLDYGQHVV+GTPG VFDMIRRR
Sbjct: 120 IGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRR 153
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 137 bits (331), Expect = 2e-31
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = +1
Query: 232 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 411
V+ FD M L++ LLRG+Y YGFEKPSAIQQR+ILP +KG DVIAQAQSGTGKTATF IS
Sbjct: 28 VVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFVIS 87
Query: 412 ILQTLDTTLRETQVLILSPTRELATQIXKV 501
ILQ +DT+L+ETQ LIL+PTRELA Q K+
Sbjct: 88 ILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 137 bits (331), Expect = 2e-31
Identities = 64/127 (50%), Positives = 91/127 (71%), Gaps = 5/127 (3%)
Frame = +1
Query: 187 EDLSNVEFDTSED-----VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG 351
E L N+ ++D +E + TF+ + L +LLRGI++YGFE+PSAIQQ++I PI+ G
Sbjct: 34 EHLKNIMDQQTQDLQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILG 93
Query: 352 RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNV 531
+DV+AQAQSGTGKT TF+I LQ +D R+TQV+IL+P RELA QI V+ +G ++N+
Sbjct: 94 KDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNI 153
Query: 532 QCHACIG 552
+ CIG
Sbjct: 154 EAFCCIG 160
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 130 bits (313), Expect = 4e-29
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
E+ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 32 EITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 91
Query: 409 SILQTLDTTLRETQVLILSPTRELATQ 489
SILQ L+ +ETQ L+L+PTRELA Q
Sbjct: 92 SILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 121 bits (291), Expect = 2e-26
Identities = 56/92 (60%), Positives = 74/92 (80%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 414
+ +F+ M L + LLRGI+ YGFEKPSAIQQ++I+P +KG DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 415 LQTLDTTLRETQVLILSPTRELATQIXKVILA 510
LQ +D +TQ +IL+PTRELA QI KV+L+
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 119 bits (286), Expect = 7e-26
Identities = 55/116 (47%), Positives = 81/116 (69%)
Frame = +1
Query: 199 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 378
NVE+ T+E+ + TF+SM LR ELLRGI +GF +P +QQR+++P+++GRDV+ Q
Sbjct: 9 NVEWKTNEEPIIQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFR 68
Query: 379 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHAC 546
TGKT S+S+L D ++++ QVLIL TR+L + +I+ALG F+NV HAC
Sbjct: 69 STGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHAC 124
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 105 bits (252), Expect = 9e-22
Identities = 53/89 (59%), Positives = 64/89 (71%)
Frame = +1
Query: 274 LRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQV 453
L + G EKPSAIQQ+ I+P KG DVI QAQSGTGKTATF ILQ L+ L + Q
Sbjct: 24 LLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQA 83
Query: 454 LILSPTRELATQIXKVILALGDFMNVQCH 540
L+L+PTRELA QI KV+ ALGD +NV+ +
Sbjct: 84 LVLAPTRELAQQIEKVMRALGDHLNVKIY 112
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 105 bits (252), Expect = 9e-22
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Frame = +1
Query: 277 RGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVL 456
+ + +YGFEKPS IQQ I+PI+KG+D IAQAQSGTGKTATFSI+ LQ +DT+ TQ L
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQAL 106
Query: 457 ILSPTRELATQ-IXKVILALG 516
IL+PTRELA Q I ++ LG
Sbjct: 107 ILAPTRELAQQTITRIFFILG 127
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 551 GGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
GGT+ D ++L G VV GTPG V D+I+++
Sbjct: 205 GGTDPKEDRKRLREGVQVVVGTPGRVLDLIQKK 237
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 103 bits (247), Expect = 4e-21
Identities = 54/124 (43%), Positives = 82/124 (66%)
Frame = +1
Query: 181 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 360
+SE + +F ++ +EV PT++SM L+ EL+ I G+EKPS IQQR+I I +G+++
Sbjct: 1 MSEVHEDRQFQSNVPLEVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNI 60
Query: 361 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCH 540
+ Q+Q+G+GKTATFSI L L T + T+++I+SPTRELA Q + +LG
Sbjct: 61 MFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTR 116
Query: 541 ACIG 552
AC+G
Sbjct: 117 ACVG 120
Score = 39.9 bits (89), Expect = 0.052
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIR 643
N +GG +LG D++ L G H VSGTPG + +++
Sbjct: 114 NTRACVGGNSLGADVKALQKGIHCVSGTPGRILQLLK 150
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 103 bits (247), Expect = 4e-21
Identities = 49/106 (46%), Positives = 71/106 (66%)
Frame = +1
Query: 217 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 396
S + + T++ GL+++LL+GIY+ GFE PS IQ+ +I PI+ GRD+ AQAQSGTGKT
Sbjct: 31 SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTG 90
Query: 397 TFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQ 534
F+++ LQ D + TQ+L+L+ TRE+A Q LG FM +
Sbjct: 91 AFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGAR 136
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 99 bits (238), Expect = 5e-20
Identities = 49/91 (53%), Positives = 65/91 (71%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ GLR ELL GIYT GFE+PS IQ+++I + GRD++A+A++GTGKTA+F I L
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALG 516
++T+L Q LIL PTRELA Q +V LG
Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLG 128
Score = 36.7 bits (81), Expect = 0.49
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDM 637
VM+ GGT L DI +L H++ GTPG + D+
Sbjct: 136 VMITTGGTTLRDDILRLQQPVHILVGTPGRILDL 169
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 98.7 bits (235), Expect = 1e-19
Identities = 50/97 (51%), Positives = 70/97 (72%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
FD GL+D +L+GI GF PS +Q +SI I++G+D+IAQAQ+GTGKTA F+I IL T
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNT 106
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQ 534
L+ ++ + LI++PTRELA QI + IL LG F ++
Sbjct: 107 LNRN-KDIEALIITPTRELAMQISEEILKLGRFGRIK 142
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 98.3 bits (234), Expect = 1e-19
Identities = 44/109 (40%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Frame = +1
Query: 211 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTG 387
D + + + TF+ +GL+ ELL+G+Y G+ KPS IQ+ ++ I++ ++IAQ+QSGTG
Sbjct: 61 DPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTG 120
Query: 388 KTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQ 534
KTA F++ +L +D ++ Q + +SPT+ELA Q +VI +G F N++
Sbjct: 121 KTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 96.7 bits (230), Expect = 4e-19
Identities = 49/123 (39%), Positives = 76/123 (61%)
Frame = +1
Query: 181 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 360
L +S V D + + V F MGL DELL+ IY GFEKPS IQ+ +I I++G +V
Sbjct: 32 LDGSISGVGTDRGQKLLVAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNV 91
Query: 361 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCH 540
+ Q++SGTGKT ++ +L R TQV++++PTREL+TQ+ +VI L + ++
Sbjct: 92 VVQSKSGTGKTIAYTCGVLGNTKIGER-TQVMVVTPTRELSTQVTEVISGLAGPLGIKVF 150
Query: 541 ACI 549
+ +
Sbjct: 151 SAL 153
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 96.7 bits (230), Expect = 4e-19
Identities = 47/104 (45%), Positives = 65/104 (62%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+ L+ ELL GI+ GFEKPS IQ+ +I + GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ L + Q LI+ PTRELA Q +V+ LG + C G
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTG 150
Score = 41.1 bits (92), Expect = 0.023
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 539 MLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
M+ GGTNL DI +L+ H++ GTPG V D+ R+V
Sbjct: 146 MVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKV 183
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 95.9 bits (228), Expect = 7e-19
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI--VKGRDVIAQAQSGTGKTATFSI 408
+ FD M L LL+G+Y+YGF PS IQ +I I R VIAQAQSGTGKT FSI
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSI 149
Query: 409 SILQTLDTTLRETQVLILSPTRELATQIXKVILALG 516
+L +D + + TQ L+L+PTRELATQI V +G
Sbjct: 150 GVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIG 185
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 94.3 bits (224), Expect = 2e-18
Identities = 50/113 (44%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Frame = +1
Query: 181 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 357
++ +LS E + +++ TF MGL ++L G+ GF KPS IQ +SI P+ + G D
Sbjct: 5 IAHNLSAKERTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI-PLGRCGFD 63
Query: 358 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALG 516
+I +A+SGTGKTA F I L+ +D + QV+IL+PTRE+A QI +VI +LG
Sbjct: 64 LIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLG 116
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 93.5 bits (222), Expect = 4e-18
Identities = 44/89 (49%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 417
+F ++GL DE+L + GF P+ IQ+++I +++G RD++ QAQ+GTGKTA F I IL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 418 QTLDTTLRETQVLILSPTRELATQIXKVI 504
+T+D + R TQ LIL+PTRELA Q+ + I
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEI 91
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 93.1 bits (221), Expect = 5e-18
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = +1
Query: 238 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 417
PTF + L +L + T G+E PS IQ ++I +++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 9 PTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLL 68
Query: 418 QTLDTTLRETQVLILSPTRELATQIXKVILALG 516
LD RE QVL+L+PTRELA Q+ + G
Sbjct: 69 SRLDLQRREPQVLVLAPTRELAQQVAASFVQYG 101
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 93.1 bits (221), Expect = 5e-18
Identities = 49/139 (35%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Frame = +1
Query: 121 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 300
+E ++ S+ +SS ++ + L++++ D + + +FD +GL ELL+GIY F
Sbjct: 54 VEEKKTKQEDSNLISSEYEVKVK-LADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKF 112
Query: 301 EKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTR 474
+KPS IQ+R++ ++ R++IAQ+QSGTGKTA FS+++L ++ Q + L+P+R
Sbjct: 113 QKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSR 172
Query: 475 ELATQIXKVILALGDFMNV 531
ELA Q +V+ +G F +
Sbjct: 173 ELARQTLEVVQEMGKFTKI 191
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 93.1 bits (221), Expect = 5e-18
Identities = 52/157 (33%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
Frame = +1
Query: 124 EANXIRKMTSSE-VSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 300
EA+ I+ +E + +N + L++++ D + + + +F + L ++L++GI GF
Sbjct: 109 EASDIQLQDDTEGLITNTFQVEVKLADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGF 168
Query: 301 EKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTR 474
+KPS IQ++++ ++ R++I Q+QSGTGKTA F++++L +D T+ Q + ++P+R
Sbjct: 169 QKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSR 228
Query: 475 ELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
ELA QI +VI +G F V I SW R I
Sbjct: 229 ELARQIQEVIDQIGQFTQVGTFLAIP--GSWSRNSRI 263
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 92.7 bits (220), Expect = 7e-18
Identities = 45/96 (46%), Positives = 63/96 (65%)
Frame = +1
Query: 226 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 405
+E + +F + L +ELL+ I GF +PS IQ +I +++GRDVI QAQ+GTGKTA F
Sbjct: 1 MESVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFG 60
Query: 406 ISILQTLDTTLRETQVLILSPTRELATQIXKVILAL 513
+ +LQ +D R Q L+L PTRELA Q+ + AL
Sbjct: 61 LPLLQRIDAADRSVQALVLCPTRELALQVANGLTAL 96
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 91.1 bits (216), Expect = 2e-17
Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Frame = +1
Query: 112 FKNLEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYT 291
F E + I K+ +S++ + D + D + + TF + L++ LL+GI
Sbjct: 37 FTRAEISYINKLLNSKLFETHDL---DFEVLRSDPDHPLHSVRTFQELNLKEPLLKGIAA 93
Query: 292 YGFEKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILS 465
GF KPS IQ+R++ ++ +++IAQ+QSGTGKTATF +++L + T + Q L ++
Sbjct: 94 MGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMA 153
Query: 466 PTRELATQIXKVILALGDFM 525
PTRELA QI V + FM
Sbjct: 154 PTRELALQIESVGRQMAQFM 173
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/88 (46%), Positives = 60/88 (68%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF +GL+ +L + G+EKPS IQ I ++ GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVI 504
LD L+ Q+L+L+PTRELA Q+ + +
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAM 94
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 89.8 bits (213), Expect = 5e-17
Identities = 44/104 (42%), Positives = 67/104 (64%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF + L +++L+ + GFE+PS IQ ++I +++G+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L R Q L+L+PTRELA Q+ + I +G V+ A G
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYG 110
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 89.8 bits (213), Expect = 5e-17
Identities = 47/107 (43%), Positives = 66/107 (61%)
Frame = +1
Query: 232 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 411
V PTF S+GL EL + T G++ P+AIQ + ++GRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 412 ILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
ILQ L + LIL+PTREL QI + ILA+G + V +G
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVG 155
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 89.4 bits (212), Expect = 7e-17
Identities = 48/104 (46%), Positives = 64/104 (61%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+ +GL L+ GF+ PS IQ +I I+KGRD+IA A++G+GKTA+F+I IL
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L +IL+PTRELA QI + A+G MNV C IG
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIG 108
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 89.4 bits (212), Expect = 7e-17
Identities = 43/100 (43%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSI 408
+ +F+ + L+ ELL GI + GF KPS+IQ+R++ +++ +++IAQ+QSGTGKTATF +
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 409 SILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMN 528
++L +D Q L ++PTREL QI +V + + FMN
Sbjct: 107 TMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMN 146
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 89.4 bits (212), Expect = 7e-17
Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Frame = +1
Query: 184 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 357
++DLS+ T + + P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 43 AQDLSSPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 101
Query: 358 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFM-NVQ 534
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLE 161
Query: 535 CHACIG 552
CH IG
Sbjct: 162 CHVFIG 167
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 89.0 bits (211), Expect = 9e-17
Identities = 43/94 (45%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 420
F M ++ E+L+ + GFEKP+ IQ+ ++LP +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLPFAFEGKDIIGQAQTGTGKTAAFAIPILS 61
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDF 522
LD ++ Q L+++PTRELA QI + LG +
Sbjct: 62 NLDCSINRIQHLVIAPTRELANQIYDQLNILGKY 95
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 89.0 bits (211), Expect = 9e-17
Identities = 42/87 (48%), Positives = 61/87 (70%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F S+GL LLR I G+E+PS IQ++SI +++G+DV+ AQ+GTGKTA F++ +L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 424 LDTTLRETQVLILSPTRELATQIXKVI 504
+RE QVL+L+PTRELA Q+ +
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAV 94
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
V + GG++ G R L G V GTPG V D IRR
Sbjct: 106 VASIYGGSDFGSQFRALKQGPQWVVGTPGRVMDHIRR 142
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/111 (36%), Positives = 73/111 (65%)
Frame = +1
Query: 193 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 372
+++ + +T + E + F S+GL + LL + + GF + IQ +I P++ G+DV+ +A
Sbjct: 1 MTDQKTETVTEPEAV-AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEA 59
Query: 373 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFM 525
Q+GTGKTA F + L +DT++++ Q+++L+PTRELA Q+ + I + G M
Sbjct: 60 QTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDM 110
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
V + GG + G ++L+ G VV GTPG + D +RR+
Sbjct: 115 VATLYGGQSYGPQFQQLERGAQVVVGTPGRLMDHLRRK 152
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/58 (72%), Positives = 46/58 (79%)
Frame = +1
Query: 253 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL 426
MGL++ LLRGIY YG EKPSAIQQ+ I+P KG DVI QAQSGTGKTATF ILQ L
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/91 (45%), Positives = 62/91 (68%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +GL+ +L IYT G++KP+ IQ +S+ I++G+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALG 516
L ++ QVLIL+P REL QI + + LG
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLG 97
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 87.0 bits (206), Expect = 3e-16
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Frame = +1
Query: 184 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 357
+ D+ T + V P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 44 AHDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 102
Query: 358 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFM-NVQ 534
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLE 162
Query: 535 CHACIG 552
CH IG
Sbjct: 163 CHVFIG 168
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 87.0 bits (206), Expect = 3e-16
Identities = 43/93 (46%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
FD +GL++ LL+ I GFE+PS IQ SI ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 424 LDTT--LRETQVLILSPTRELATQIXKVILALG 516
D + + + LIL+PTRELA Q+ + ++ LG
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLG 98
Score = 37.5 bits (83), Expect = 0.28
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+V+ + GG + IR L G +V GTPG V D+IRR+
Sbjct: 104 SVLPIYGGQPIDRQIRALKNGVDIVVGTPGRVLDLIRRK 142
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 87.0 bits (206), Expect = 3e-16
Identities = 44/118 (37%), Positives = 71/118 (60%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F L DELL+ I FE P+ +QQ+ I I++ +D+I ++Q+G+GKTA F+I I Q
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPICQL 65
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEIGLRT 597
+D + Q L+L PTRELA Q+ + + +G F ++ A G+ + + KE+ +T
Sbjct: 66 VDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKT 123
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 87.0 bits (206), Expect = 3e-16
Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F SMGL EL++GI G++ P+ IQ+++I I++GRDV+A A++G+GKTA F I + +
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 424 LD--TTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + + LILSPTRELA Q K I LG FM ++ +G
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLG 145
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 86.6 bits (205), Expect = 5e-16
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Frame = +1
Query: 190 DLSNVEFDTSEDVEV----IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 357
D + T +D+++ + F + GL++ELLR + GFE P+ +Q S+ + G
Sbjct: 53 DFKEEQQPTGKDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQ 112
Query: 358 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFM 525
+I QA++GTGKTA F +++L T++T + + L+++ TRELA Q L LG FM
Sbjct: 113 LICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFM 168
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 86.6 bits (205), Expect = 5e-16
Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+FDS+GL ++LR + G+ +P+ IQQ++I +++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 421 TLDTT------LRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L T R + LIL+PTRELA QI + + ++N++ G
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFG 111
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 86.2 bits (204), Expect = 6e-16
Identities = 43/88 (48%), Positives = 57/88 (64%)
Frame = +1
Query: 226 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 405
+E TF + +ELL+ I GFE+P+ IQ +I I+ G+DV QAQ+GTGKTA F
Sbjct: 1 MEETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFG 60
Query: 406 ISILQTLDTTLRETQVLILSPTRELATQ 489
I I++ LD + Q L+LSPTRELA Q
Sbjct: 61 IPIIERLDPDNKNVQALVLSPTRELAIQ 88
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 86.2 bits (204), Expect = 6e-16
Identities = 39/98 (39%), Positives = 63/98 (64%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF +GL D LL+ + + GFE+ + IQ +I ++G+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQ 534
+DT Q ++++PTRELA Q+ + + +G V+
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVR 100
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
++ + GG ++ IR L H++ GTPG + D I R+
Sbjct: 101 ILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRK 138
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 86.2 bits (204), Expect = 6e-16
Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQ 420
F S+ L +L G+ GF++PS IQ ++I P+ + G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAI-PLGRCGLDLIVQAKSGTGKTCVFTTIALD 86
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFM-NVQCHACIG 552
+L TQVL+L+PTRE+A QI V++A+G M ++CH IG
Sbjct: 87 SLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIG 131
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 86.2 bits (204), Expect = 6e-16
Identities = 45/105 (42%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F SMGL LLR I+ GF+ P+ IQ+++I +++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 424 LDTTL--RETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L +TL T+ LILSP RELA Q KV+ +++ A +G
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVG 175
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 85.8 bits (203), Expect = 8e-16
Identities = 39/86 (45%), Positives = 59/86 (68%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF +GL LL+ + + G+E P+ IQ ++I+ ++ G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 421 TLDTTLRETQVLILSPTRELATQIXK 498
+DTT + Q L+L PTRELA Q+ +
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQVAE 91
Score = 35.9 bits (79), Expect = 0.85
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 530 FNVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
F+V+ + GG ++ +R L V+ GTPG V D +RR
Sbjct: 103 FHVLPIYGGADMRNQLRALKQNPQVIVGTPGRVMDHLRR 141
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSI-LPIVKGRDVIAQAQSGTGKTATFSISILQ 420
F+ +GL + LLR I GFE P+ +Q+++I + + K D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 421 TLDTTLRETQVLILSPTRELATQI 492
+D R TQ LILSPTREL QI
Sbjct: 64 KIDANNRNTQALILSPTRELCLQI 87
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
NV+ V GG ++ R + G ++ TPG + DMI RR+
Sbjct: 102 NVVAVYGGASITEQARDIKRGAQIIVATPGRMQDMINRRL 141
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISIL 417
+ + L +LL+GI GF KPS IQQ + LP++ G ++IAQA++G+GKTATF++++L
Sbjct: 101 WSQLPLSPDLLKGIQNMGFAKPSKIQQCA-LPLILGSCTNIIAQAKNGSGKTATFALAML 159
Query: 418 QTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQC 537
++ + Q L + PTRELATQ +VI LG F ++C
Sbjct: 160 SKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIKC 199
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 85.0 bits (201), Expect = 1e-15
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F ++G+ +L I G+E+PS IQ ++I I+ G D+I QAQ+GTGKTA F++ +L
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 424 LDTTLRETQVLILSPTRELATQI 492
+D RE Q+LIL+PTRELA Q+
Sbjct: 85 IDPARREPQLLILAPTRELALQV 107
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 85.0 bits (201), Expect = 1e-15
Identities = 42/95 (44%), Positives = 61/95 (64%)
Frame = +1
Query: 220 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 399
ED + + TF S+GL +E+L + GF P+ IQ +I P+++ RDV+ AQ+GTGKTA
Sbjct: 40 EDTDTV-TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAA 98
Query: 400 FSISILQTLDTTLRETQVLILSPTRELATQIXKVI 504
F + +L +D R Q L+L+PTRELA Q + I
Sbjct: 99 FGLPLLAIVDADERNVQALVLAPTRELAMQSAQAI 133
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
+V+ V GG+ G I L G VV GTPG V D+I +
Sbjct: 144 DVVPVYGGSPYGPQIGALKRGAQVVVGTPGRVIDLIEK 181
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 84.6 bits (200), Expect = 2e-15
Identities = 48/139 (34%), Positives = 77/139 (55%)
Frame = +1
Query: 136 IRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSA 315
+ ++++ E S K S S+ +S + +F L ELL I + + +P+
Sbjct: 64 VSELSNKEDLSTKKDQSSASSSSSTSSSSSPPSVQSFTEFDLVPELLESIQSLKYTQPTP 123
Query: 316 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIX 495
IQ +I ++G+D++ A++G+GKTA F+I ILQTL T + L+L+PTRELA QI
Sbjct: 124 IQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIK 183
Query: 496 KVILALGDFMNVQCHACIG 552
+ ALG M ++ IG
Sbjct: 184 ETFDALGSSMGLRSVCIIG 202
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 84.2 bits (199), Expect = 2e-15
Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISIL 417
TFD +GL LL+ I GFE PS IQ+ +I ++ + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 418 QTLDTTLRETQVLILSPTRELATQI 492
Q +D + + TQ LI++PTREL QI
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQI 86
Score = 37.5 bits (83), Expect = 0.28
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
V+ V GG+N+ R++ G +V TPG + DM+RRR+
Sbjct: 102 VVAVYGGSNIQEQAREISRGAQIVVATPGRMQDMMRRRM 140
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 84.2 bits (199), Expect = 2e-15
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+SMGL EL R I + GF P+ IQ+++I I+ GRD++A +++G+GKTA F I ++
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 424 LD--TTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L +T+ + LIL PTRELA QI V+ AL F ++Q +G
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVG 116
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 83.8 bits (198), Expect = 3e-15
Identities = 42/104 (40%), Positives = 60/104 (57%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F+ L+ +LLR + GFE+PS +Q + I + G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + L+L TRELA QI LG F N + A G
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYG 142
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 83.8 bits (198), Expect = 3e-15
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F SMGL + L G+ G+ P+ IQ+++I I++G D+IA A++G+GKTA + + I+
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 424 LDTTLRE-TQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L+T E + LI+ PTRELA Q KV LG N++ IG
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIG 118
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 83.8 bits (198), Expect = 3e-15
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Frame = +1
Query: 217 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 396
+EDV P F +GL + ++R I G+E P+ IQ ++I ++KG DV+ AQ+GTGKTA
Sbjct: 284 AEDVSDRPRFADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTA 343
Query: 397 TFSISILQTL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSW 567
+F++ +LQ L R + LIL PTRELA Q+ + G ++ + HA + +S
Sbjct: 344 SFTLPMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRL-THALLIGGESM 402
Query: 568 XRYKEI 585
+++
Sbjct: 403 AEQRDV 408
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 83.4 bits (197), Expect = 4e-15
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F SMGL ++RGI G++ P+ IQ+++I + GRDV+A A++G+GKTA F I + +
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 424 LDTTLRET--QVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L T +T + LILSPTRELA Q + I +G F ++ +G
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILG 144
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 83.4 bits (197), Expect = 4e-15
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
E +PTF+ + L LL+ + GF +P+ IQ ++I + G+D++A A +G+GKTA F +
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 409 SILQTL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYK 579
+L+ L D+ R +VLIL PTRELA Q V+ L F N+ +G + + +
Sbjct: 247 PVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSN--KAQ 304
Query: 580 EIGLR 594
E+ LR
Sbjct: 305 EVELR 309
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 83.0 bits (196), Expect = 6e-15
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSIS 411
+ F+ +GL LL G+ GFE P+ IQQ+SI ++K D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 412 ILQTLDTTLRETQVLILSPTRELATQI 492
+L +D RE Q LIL+PTRELA QI
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQI 98
Score = 37.1 bits (82), Expect = 0.37
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
NV+ V GG N+ IR + G ++ TPG + D+++RR
Sbjct: 113 NVVPVFGGANIMNQIRDIRRGAQIIVATPGRLMDLMKRR 151
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 83.0 bits (196), Expect = 6e-15
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Frame = +1
Query: 205 EFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGT 384
+ D +EDV F + LR ELLR + G+E+P+ IQ+ ++ P+V GRD++ QA +GT
Sbjct: 49 DIDPAEDVA---GFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGT 105
Query: 385 GKTATFSISILQTLD---TTLRETQVLILSPTRELATQIXKVILALG 516
GKTA F++ +L L T Q L+L PTRELA Q+ + I G
Sbjct: 106 GKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYG 152
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 83.0 bits (196), Expect = 6e-15
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF +GL +L+ + G+EKPS IQ+++I P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 421 TLDTTL---RETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + R + LIL+PTRELA QI + A G + ++ G
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFG 108
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 82.6 bits (195), Expect = 7e-15
Identities = 43/102 (42%), Positives = 63/102 (61%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
E + F+ + + +E+ + I GFE+PS IQ ++I I+ G DVI QAQ+GTGKTA F I
Sbjct: 3 EAMIKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGI 62
Query: 409 SILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQ 534
+++ + T R Q LIL+PTRELA Q+ I L ++
Sbjct: 63 PVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIR 103
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 545 VLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+ GG ++ I+ L G VV GTPG + D +RR+
Sbjct: 107 IYGGQSIVHQIKALKQGVQVVIGTPGRIIDHLRRK 141
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 82.6 bits (195), Expect = 7e-15
Identities = 48/103 (46%), Positives = 64/103 (62%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F SMGL+ +LL+ I GFEKP+ IQ +SI + G D++ QAQ+GTGKTA+F I IL
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ Q L+L PTRELA Q+ + I +L M +Q A G
Sbjct: 66 V-IKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYG 107
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 82.6 bits (195), Expect = 7e-15
Identities = 39/91 (42%), Positives = 59/91 (64%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+S+GL D L + + G+E + IQ +I +++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALG 516
+D +R Q L+L PTRELA Q+ + + G
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYG 101
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
++ + GG ++ ++ L G H+V TPG + D I RR
Sbjct: 109 ILSIFGGADMRQQLKSLREGTHIVVATPGRLLDHIERR 146
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/90 (42%), Positives = 60/90 (66%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ L+ ELL GI+ G+EKPS IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILAL 513
+D Q L+L PTRELA Q+ ++ + +
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQI 180
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
VM GGTNL DI +LD HVV TPG + D++++ V
Sbjct: 189 VMATTGGTNLRDDIMRLDETVHVVIATPGRILDLMKKGV 227
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/94 (42%), Positives = 60/94 (63%)
Frame = +1
Query: 232 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 411
+I +FD +GL L+ G+ G KP+ IQ ++I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 412 ILQTLDTTLRETQVLILSPTRELATQIXKVILAL 513
I Q +DT+ RE Q +IL+PT ELA QI K I L
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLL 94
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/115 (36%), Positives = 71/115 (61%)
Frame = +1
Query: 148 TSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQR 327
+++E S+ +E + V D ++ E FD G + LL+ + G+ PS IQ+
Sbjct: 42 STAEPSTTEASTTEVTAEVTADEAKS-EPQSGFDGFGFSEALLKTLADKGYSDPSPIQKA 100
Query: 328 SILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQI 492
+ ++ GRD++ QAQ+GTGKTA F++ +L+ L++ + QVL+L+PTRELA Q+
Sbjct: 101 AFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQV 155
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
V+ V GGT+ I L G VV GTPG V D +R+
Sbjct: 171 VLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQ 207
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +GL +++ + G+E P+ IQQ +I I+ GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 424 LDTTLRE--TQVLILSPTRELATQIXK 498
+D R+ QVL+L+PTRELA Q+ +
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAE 95
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/104 (36%), Positives = 63/104 (60%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+FD +GL + + R I +G+E+P+ +Q + P+ G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ R L++ PTRELA Q+ + AL ++ A G
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYG 124
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+V+ V GG ++G ++KL+ G ++ GTPG ++D IRRR
Sbjct: 118 SVVAVYGGASMGEQLQKLEAGAEIIVGTPGRIYDHIRRR 156
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 82.2 bits (194), Expect = 1e-14
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Frame = +1
Query: 187 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 366
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 367 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQC 537
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 538 HACIGRYQSWXRYKEI 585
+G Q ++ I
Sbjct: 125 ACLVGGDQIEEQFSTI 140
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/84 (42%), Positives = 58/84 (69%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+ +GL + +L+ + GFE PS IQQ I ++ G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 421 TLDTTLRETQVLILSPTRELATQI 492
+D + + Q+L+++PTRELA Q+
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQV 89
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
++ + GG +R L G VV GTPG + D IRR
Sbjct: 105 IVTLYGGQRYDIQLRALKQGAQVVVGTPGRILDHIRR 141
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/107 (41%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Frame = +1
Query: 211 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 381
D S + + TF+ + L++ELL+GIY GF +PS IQ+ + LP++ +++IAQ+QSG
Sbjct: 88 DPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSG 146
Query: 382 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDF 522
TGKTA F +++L ++ Q L L+PT ELA Q +V+ +G F
Sbjct: 147 TGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKF 193
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 81.4 bits (192), Expect = 2e-14
Identities = 43/116 (37%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
Frame = +1
Query: 184 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--- 354
S + ++ D S + + +F+ + L+ ELL+G+Y GF +PS IQ+ + LP++ +
Sbjct: 20 SNQVEVLQRDPSSPLYSVKSFEELRLKPELLKGVYQMGFNRPSRIQENA-LPLMMAQPAQ 78
Query: 355 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDF 522
++IAQ+QSGTGKTA F +++L ++ + Q L ++PT ELA QI +V+ +G F
Sbjct: 79 NLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRF 134
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/103 (38%), Positives = 65/103 (63%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +GL LL+ + GFE P+ IQ+ +I I++G +++ QA +GTGKTA + + +LQ
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ ++ QVLI++PTRELA Q+ + LG ++ V+ A G
Sbjct: 64 IQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYG 105
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/86 (43%), Positives = 58/86 (67%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ L+ ELL GI+ G+EKPS IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 424 LDTTLRETQVLILSPTRELATQIXKV 501
LD Q +++ PTRELA Q+ ++
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 81.4 bits (192), Expect = 2e-14
Identities = 44/114 (38%), Positives = 65/114 (57%)
Frame = +1
Query: 211 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 390
+T+ED E +F + L EL++ + KP+ IQ ++I P ++G D+I AQ+G+GK
Sbjct: 73 NTNED-ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGK 131
Query: 391 TATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
TA F+I IL L IL+PTRELA QI + +LG M V+ +G
Sbjct: 132 TAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVG 185
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 81.0 bits (191), Expect = 2e-14
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Frame = +1
Query: 184 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 342
S+ LS+VE DT E V F SMGL + +G+ G++ P+ IQ+++I I
Sbjct: 12 SDYLSDVEPDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVI 71
Query: 343 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIXKVILALG 516
+ G+DV+A A++G+GKTA F I + + L +T + LILSPTRELA Q K LG
Sbjct: 72 LDGKDVVAMARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELG 131
Query: 517 DFMNVQCHACIG 552
F ++ +G
Sbjct: 132 KFTKLKTALILG 143
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 81.0 bits (191), Expect = 2e-14
Identities = 36/87 (41%), Positives = 60/87 (68%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +GL +E+L+ + G E+P+ IQ+++I I+KG++VI +A++GTGKT + + I++
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEK 63
Query: 424 LDTTLRETQVLILSPTRELATQIXKVI 504
+D + E Q +ILSPT EL QI V+
Sbjct: 64 IDDSKNEMQAIILSPTHELGVQINNVL 90
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 81.0 bits (191), Expect = 2e-14
Identities = 35/87 (40%), Positives = 59/87 (67%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ +GL + +L + + G+E PS IQ++ I ++ +D+I QAQ+GTGKTA F + +L
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 424 LDTTLRETQVLILSPTRELATQIXKVI 504
++ + Q+LIL+PTRELA Q+ + +
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAV 100
Score = 36.3 bits (80), Expect = 0.64
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 530 FNVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
F+V+ + GG + +R L G H + GTPG V D I ++
Sbjct: 110 FHVLPIYGGQSYDIQLRPLKRGVHAIVGTPGRVMDHIEKK 149
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQ 420
F MGL D +L I G+E P+ IQ++ I ++ G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILAL 513
LD + Q L+L+PTRELA Q+ I +L
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSL 94
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
N++ V GG ++G IR L +V GTPG + D + R
Sbjct: 101 NLLPVYGGVSIGNQIRALKRRVDLVVGTPGRIIDHLNR 138
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 81.0 bits (191), Expect = 2e-14
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Frame = +1
Query: 136 IRKMTSSEVSSNXKILSE-DLSNVEFDTSEDVEVIPT--FDSMGLRDELLRGIYT-YGFE 303
+ ++ E IL E + SN++ TS D F+ + L EL++G+Y FE
Sbjct: 54 LNSLSIKEEEKPDSILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFE 113
Query: 304 KPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRE 477
KPS IQ S+ I+ + +IAQA +G+GKT F + +L +D TLRE Q L + PTRE
Sbjct: 114 KPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRE 173
Query: 478 LATQIXKVILALGDFMNVQCHACI 549
LA Q +V+ +G F + +
Sbjct: 174 LANQNMEVLQKMGKFTGITAELAV 197
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/96 (40%), Positives = 59/96 (61%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF + + +LR I G+E P+AIQ +I ++ G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMN 528
+D T + Q L+L PTRELA Q+ + G +++
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLS 109
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 81.0 bits (191), Expect = 2e-14
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Frame = +1
Query: 184 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 342
SE S+VE DT E V F SMGL + +GI G++ P+ IQ+++I I
Sbjct: 71 SECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 130
Query: 343 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIXKVILALG 516
+ G+DV+A A++G+GKTA F + + + L T +T + LILSPTRELA Q K LG
Sbjct: 131 LDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELG 190
Query: 517 DFMNVQCHACIG 552
F ++ +G
Sbjct: 191 KFTGLKTALILG 202
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 80.6 bits (190), Expect = 3e-14
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F +G+ E + + GF P+ IQ ++I ++ GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 421 TLDTTLRETQVLILSPTRELATQI 492
LD + Q ++L+PTRELA Q+
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQV 87
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 539 MLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
+ + GG ++ + +L G H+V GTPG V D++ R
Sbjct: 103 LAIYGGQSIDRQMLQLKRGVHIVVGTPGRVIDLLER 138
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +1
Query: 238 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 417
P F + L + LLR + G+E PS IQ +I ++ RDV+ QAQ+GTGKTA+F++ IL
Sbjct: 7 PLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPIL 66
Query: 418 QTLDTTLRETQVLILSPTRELATQIXK 498
+D Q L+L+PTRELA Q+ +
Sbjct: 67 ARIDIKQTTPQALVLAPTRELAIQVAE 93
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 530 FNVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
F+V+ + GG + G + L G HVV GTPG V D + +
Sbjct: 105 FHVLPIYGGQSYGAQLSALRRGVHVVVGTPGRVIDHLEK 143
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 80.6 bits (190), Expect = 3e-14
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F S L LL I GF P+ IQ+++I P+++G DV+A A++G+GKTA F I +L T
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 424 LDTTLRETQV--LILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + + L+LSPTREL+ QI + AL F++++ A +G
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVG 128
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/98 (38%), Positives = 62/98 (63%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF +GL E+++ I GFE+ + IQ ++I ++ +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQ 534
++ Q L+++PTRELA Q+ + + +G V+
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVR 100
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
V+ + GG ++ IR L HV+ GTPG + D I R
Sbjct: 101 VLPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINR 137
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/95 (38%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSIS 411
+ F+S GL ++ + GF P+ IQ++++ ++ G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 412 ILQTLDTTLRETQVLILSPTRELATQIXKVILALG 516
+++ +D+T+++TQ L+LSPTRELA Q+ + + LG
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLG 137
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 80.2 bits (189), Expect = 4e-14
Identities = 46/128 (35%), Positives = 70/128 (54%)
Frame = +1
Query: 211 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 390
D + V TF +GL L+ + G P+A+Q+R I ++GRDV+ A++G+GK
Sbjct: 68 DDAAAAAVPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGK 127
Query: 391 TATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWX 570
TA F++ IL L L L+PTRELA Q+ + ALG + ++C A IG + S
Sbjct: 128 TAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLG 187
Query: 571 RYKEIGLR 594
+ K + R
Sbjct: 188 QAKGLARR 195
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 80.2 bits (189), Expect = 4e-14
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Frame = +1
Query: 211 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 381
DT + I +F +GL ++ G+ F+KPS IQ R+ LP++ R++IAQ+QSG
Sbjct: 87 DTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARA-LPLMLSNPPRNMIAQSQSG 145
Query: 382 TGKTATFSISILQTLD-TTLRETQVLILSPTRELATQIXKVILALGDF 522
TGKT F ++IL +D + Q L L+P+RELA QI VI ++G F
Sbjct: 146 TGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQF 193
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 79.8 bits (188), Expect = 5e-14
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 414
I +F + LR LL + G+E PS IQ I ++ G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 415 LQTLDTTLRETQVLILSPTRELATQIXK 498
L LD ++ QVL+L+PTRELA Q+ +
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQVAE 130
Score = 40.7 bits (91), Expect = 0.030
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 530 FNVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
F+V+ V GG ++ +R+L G HV+ GTPG V D I R+
Sbjct: 142 FHVLPVYGGQSMVVQLRQLARGAHVIVGTPGRVMDHIERK 181
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 79.8 bits (188), Expect = 5e-14
Identities = 40/90 (44%), Positives = 56/90 (62%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F ++ L L GI G+ + +Q +S+ PI++G DVIAQA +G+GKTA F + +LQ
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILAL 513
LD L Q L+L PTRELA Q+ K + L
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGKQLRKL 117
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 79.8 bits (188), Expect = 5e-14
Identities = 34/105 (32%), Positives = 66/105 (62%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+ L +++L+ + + G+ PS +Q+ I ++KG++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGR 555
++ Q LI+ PTRELA Q+ I +G V+C A G+
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGK 108
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 79.8 bits (188), Expect = 5e-14
Identities = 40/94 (42%), Positives = 60/94 (63%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F S+ L ++L++ + + G+E+ + IQ+ S+ I+ G+D+IAQA++GTGKTA F + +L
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFM 525
L QVLIL PTREL Q+ K I L M
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMM 99
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 79.8 bits (188), Expect = 5e-14
Identities = 37/94 (39%), Positives = 61/94 (64%)
Frame = +1
Query: 232 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 411
++ +FD + + ++ G+ G + P+AIQ+ +I +K +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 412 ILQTLDTTLRETQVLILSPTRELATQIXKVILAL 513
I Q +D++ RETQ LIL+PT EL QI K I L
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTL 94
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 79.8 bits (188), Expect = 5e-14
Identities = 37/83 (44%), Positives = 56/83 (67%)
Frame = +1
Query: 268 ELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET 447
+L++ IY YGFE PS +QQ SI +++G+ + AQ+G+GKTA F IS+L ++
Sbjct: 13 DLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSIC 72
Query: 448 QVLILSPTRELATQIXKVILALG 516
Q +I+SPT+EL+ Q +VI LG
Sbjct: 73 QAVIISPTKELSNQTLEVINTLG 95
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 79.8 bits (188), Expect = 5e-14
Identities = 40/110 (36%), Positives = 74/110 (67%), Gaps = 6/110 (5%)
Frame = +1
Query: 181 LSEDLSNVEFDTSED-VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 357
L+++ ++VE S D +++ TF+SMGL + +LR + GF+ PS +Q +SI ++G+D
Sbjct: 3 LNKNNNSVEDSVSSDLIDLECTFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKD 62
Query: 358 VIAQAQSGTGKTATFSISILQTL-----DTTLRETQVLILSPTRELATQI 492
++A+A++G+GKTA +SI I+Q + + ++ + ++L PTREL Q+
Sbjct: 63 ILAKARTGSGKTAAYSIPIIQKVLMAKEKSNIKGVKAVVLVPTRELCEQV 112
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 79.4 bits (187), Expect = 7e-14
Identities = 37/93 (39%), Positives = 60/93 (64%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +GL E++ I + G+ + + IQ+++I ++ G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDF 522
+D ++ +TQ LIL PTRELA Q+ + L F
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKF 95
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
V+ V GG ++ IR L G H+V GTPG + D + RR
Sbjct: 101 VLAVYGGESIERQIRDLKAGAHIVVGTPGRIIDHLDRR 138
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 79.4 bits (187), Expect = 7e-14
Identities = 42/116 (36%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+SMGL +E+ RG+ G+ P+ IQ++++ I+ G D+ A A++G+GKTA F + ++Q
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 424 L--DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
L + LILSPTR+LATQ K LG F +++ +G +++E+
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEEL 166
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 79.0 bits (186), Expect = 9e-14
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +GL D +++ + G+E PS IQ +I ++ GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 424 LDTTLRETQVLILSPTRELATQIXK 498
+ QVL+L+PTRELA Q+ +
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAE 101
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 530 FNVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
F V+ V GG + G + L G HV+ GTPG V D + R
Sbjct: 113 FRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLER 151
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 79.0 bits (186), Expect = 9e-14
Identities = 43/105 (40%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+++ L + +L+ + G+ P+ IQ++SI +++G+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 421 TLDTT--LRETQVLILSPTRELATQIXKVILALGDFMNVQCHACI 549
L T + + L+L+PTRELA QI + A G + ++ HA I
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLK-HAVI 105
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 79.0 bits (186), Expect = 9e-14
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 417
TF +GL LL+ + PS IQQ++I I+ ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 418 QTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCH 540
Q ++ +L++TQVL+L PTREL Q+ K + ++ V+ H
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYI-VRIH 101
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 545 VLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
V GG + I+KL+ +H++ TPG + D+I R+
Sbjct: 105 VYGGKKIEEQIKKLETPKHILVATPGRLLDLIARK 139
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 79.0 bits (186), Expect = 9e-14
Identities = 39/108 (36%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F+ +GL +L+ I G+ +PSAIQ ++I I++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 421 TL----DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + + + L+L+PTRELA Q+ + + G ++++ G
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFG 113
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 79.0 bits (186), Expect = 9e-14
Identities = 35/86 (40%), Positives = 56/86 (65%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F +GL +L + G+E PS IQ +SI ++ G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 421 TLDTTLRETQVLILSPTRELATQIXK 498
+D + E Q+L+L+PTRELA Q+ +
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQVAE 110
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 79.0 bits (186), Expect = 9e-14
Identities = 44/117 (37%), Positives = 71/117 (60%)
Frame = +1
Query: 202 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 381
VE D +D + PTF+ +G+ EL R G+++P+ IQ +I + G+D+I A++G
Sbjct: 30 VEEDDDKDDDT-PTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETG 88
Query: 382 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+GKTA F+I ILQ L + LIL+PTREL+ QI + +++LG + + +G
Sbjct: 89 SGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILG 145
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 79.0 bits (186), Expect = 9e-14
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF + L LLR T G++KP+ IQ I + GRD+ A A +G+GKTA F++ L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 421 TL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEIGL 591
L + T+VLIL+PTRELA QI +I L F +++C +G R +E+ L
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLS--VREQEVVL 285
Query: 592 RT 597
R+
Sbjct: 286 RS 287
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 79.0 bits (186), Expect = 9e-14
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 12/123 (9%)
Frame = +1
Query: 220 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 399
E+ EV+ TF +G+R+EL++ G++ PS IQ ++ ++G+DVI AQ+G+GKT
Sbjct: 3 EENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGA 62
Query: 400 FSISILQTLDTTLRETQ------------VLILSPTRELATQIXKVILALGDFMNVQCHA 543
F+I ILQ L + +++ +LSPTRELA QI + ALG ++++C
Sbjct: 63 FAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAV 122
Query: 544 CIG 552
+G
Sbjct: 123 LVG 125
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 79.0 bits (186), Expect = 9e-14
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F SM L +L+G+ GFE P+ IQ ++I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 421 TL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + T+VLIL PTRELA Q V + F ++ CIG
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIG 366
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISILQ 420
+ + L +LL+GIY GF +PS IQ ++ I+ ++IAQA +G+GKTATF++++L
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGKTATFALAMLG 173
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEIGLRTA 600
+DT + Q + L PTRELA Q V+ LG F + + + + K IG +
Sbjct: 174 KVDTRIIHPQCMCLCPTRELARQNQDVVNELGKFTGITTWLVVAQGDKYD--KTIGSQII 231
Query: 601 CC 606
C
Sbjct: 232 IC 233
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 78.2 bits (184), Expect = 2e-13
Identities = 43/97 (44%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISIL 417
+F S+ L D++ +G+ GF+KPS IQ ++I P+ + G D+I +++SGTGKT FS L
Sbjct: 25 SFASLLLPDDIKQGLSVSGFKKPSPIQFKAI-PLGRCGFDLIVKSKSGTGKTLVFSTIAL 83
Query: 418 QTLDTTLRETQVLILSPTRELATQIXKVILALGDFMN 528
+T++T QVLIL PTRE+A QI V+ ++G +N
Sbjct: 84 ETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVN 120
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 78.2 bits (184), Expect = 2e-13
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Frame = +1
Query: 229 EVIP----TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 396
EVIP TFD +G++ LL + +G KP+ IQQ I P++ +V+ A++G+GKTA
Sbjct: 23 EVIPSDLNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTA 82
Query: 397 TFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
F++ I+ L T L+L+PTRELA+QI A G +N++ +G
Sbjct: 83 AFALPIIHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRVVQVVG 134
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 78.2 bits (184), Expect = 2e-13
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 414
I F + + L + + F PS IQ ++I I++GRD IA AQ+GTGKTA F++ I
Sbjct: 5 ISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPI 64
Query: 415 LQTLDTTLRETQVLILSPTRELATQIXKVILALGDFM-NVQCHACIGRYQSWXRYKEI 585
LQ L + TQ LIL+PTRELA Q+ + L + NV G + + K++
Sbjct: 65 LQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQL 122
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 77.8 bits (183), Expect = 2e-13
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Frame = +1
Query: 193 LSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG 351
LS+VE DT E V V F SMGL + +G+ G++ P+ IQ+++I I+ G
Sbjct: 128 LSDVEPDTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDG 187
Query: 352 RDVIAQAQSGTGKTATFSISILQTLDTTLRE--TQVLILSPTRELATQIXKVILALGDFM 525
+DV+A A++G+GKTA F I + + L + + L+LSPTRELA Q K LG F
Sbjct: 188 KDVVAMARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGKFT 247
Query: 526 NVQCHACIG 552
++ +G
Sbjct: 248 GLKMALILG 256
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/84 (40%), Positives = 56/84 (66%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F L+ +L+ + GF +P+ IQ+++I ++ G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 421 TLDTTLRETQVLILSPTRELATQI 492
+D + + Q L+L+PTRELA Q+
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQV 139
Score = 35.9 bits (79), Expect = 0.85
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
NV++V GG++ + L G VV GTPG + D+IR+
Sbjct: 153 NVLVVYGGSSYQAQVGGLRRGARVVVGTPGRLLDLIRQ 190
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/88 (38%), Positives = 60/88 (68%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F+ M L +L + F P+ IQ ++I +++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVI 504
+D ++++TQVL+++PTRELA Q+ + +
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEAL 96
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
V V GG G ++ L G +V GTPG + D++ + V
Sbjct: 108 VATVYGGAPFGPQVKALKQGTAIVVGTPGRLIDLLNKNV 146
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 5/109 (4%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F S+GL D LLR + ++ P+ +Q ++I ++ G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 421 TL-----DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + +VL+L PTRELA Q+ + +A G ++++ A G
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYG 110
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 77.8 bits (183), Expect = 2e-13
Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TFD GL + L R + P+ IQ+R+I + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 421 TLDT-----TLRETQVLILSPTRELATQIXKVILALGD 519
L T T R T+ LILSPTRELA QI + I L +
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSE 102
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 77.8 bits (183), Expect = 2e-13
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Frame = +1
Query: 220 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 399
++ V+ F ++GL + LLR I +E P+ IQ RSI +++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 400 FSISILQTLDTTL-----RETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
F + IL + R + L+L+PTRELATQI G F IG
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIG 166
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 77.8 bits (183), Expect = 2e-13
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Frame = +1
Query: 214 TSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 390
T++DV+ F S+GL+ ELL G+ GF++ + +Q+ +I I+ RDV+A+A++GTGK
Sbjct: 12 TTDDVKGSGVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGK 71
Query: 391 TATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFM 525
T +F I ILQ ++ Q L+L TRELA Q KV L M
Sbjct: 72 TGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNM 116
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/112 (38%), Positives = 62/112 (55%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
E TF +G+ D L G+ KP+ IQ +I ++GRD+I A++G+GKT F++
Sbjct: 10 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 69
Query: 409 SILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQS 564
IL L T + L+L+PTRELA QI + ALG + VQ +G S
Sbjct: 70 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 121
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/103 (33%), Positives = 64/103 (62%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F + L ++R ++ GFE+ + IQ+++I ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ T + Q L++ PTRELA Q+ + + +G ++ A G
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYG 106
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/112 (38%), Positives = 62/112 (55%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
E TF +G+ D L G+ KP+ IQ +I ++GRD+I A++G+GKT F++
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 409 SILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQS 564
IL L T + L+L+PTRELA QI + ALG + VQ +G S
Sbjct: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDS 132
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F SM L +L+GI G++ P+ IQ+++I ++GRD++A A++G+GKTA F I + +
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 424 LDTTLRE--TQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + + LILSPTRELA Q K I LG F ++ +G
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILG 142
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F + L E+ I GFE+ S IQ +I I+KG+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 424 LDTTLRETQVLILSPTRELATQIXK 498
L+ + Q LIL PTREL Q+ +
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSE 95
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 77.4 bits (182), Expect = 3e-13
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 115 KNLEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTY 294
K+ ++N ++ SSE + + E+ E TS+ + F SM L LL+ I
Sbjct: 190 KSKKSNKKEEIESSEKFESFP-MDENNEQEEETTSKKKKKTGGFQSMDLTKNLLKAILKK 248
Query: 295 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQVLILSP 468
GF P+ IQ++SI I+ G D++ A++G+GKT F I ++Q L +T + +ILSP
Sbjct: 249 GFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQKLGDHSTTVGVRAVILSP 308
Query: 469 TRELATQIXKVI 504
TRELA Q KV+
Sbjct: 309 TRELAIQTFKVV 320
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 253 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQTLD 429
MG ++L G+ GF++PS IQ ++I P+ + G D+I +A+SGTGKT F I L+ +D
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAI-PLGRCGFDLIMRAKSGTGKTLVFCIISLEMID 59
Query: 430 TTLRETQVLILSPTRELATQIXKVILALG 516
+ QVLIL+PTRE+A QI +V ++G
Sbjct: 60 IDISSVQVLILAPTREIAVQIAQVFSSVG 88
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 77.0 bits (181), Expect = 4e-13
Identities = 41/91 (45%), Positives = 57/91 (62%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F ++ L ELL + GFE + IQQ SI ++ G+D+I QA++G+GKTA FS+ IL
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALG 516
++ Q LIL PTRELA+Q+ I LG
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLG 139
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 76.6 bits (180), Expect = 5e-13
Identities = 37/94 (39%), Positives = 61/94 (64%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ L+ ELL GI+ G+E PS+IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFM 525
LD Q +++ PTRELA Q+ ++ + + M
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHM 176
Score = 41.9 bits (94), Expect = 0.013
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
VM GGTNL D+ +LD HVV TPG + D+I++
Sbjct: 181 VMATTGGTNLRDDVMRLDDTGHVVIATPGRILDLIKK 217
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 76.6 bits (180), Expect = 5e-13
Identities = 40/108 (37%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F+++GLRDEL+ I T G+ + IQ+ +I ++ D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 421 TL----DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L T ++ + LI++PTRELA Q+ + +N++ A G
Sbjct: 62 RLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYG 109
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 76.6 bits (180), Expect = 5e-13
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+S E+LR I G++ + +QQ++I I +G DV+A AQ+GTGKTA F++ ILQ
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 424 L---DTTLRET--QVLILSPTRELATQIXKVILALGDFMNV 531
+ T++ + + LIL+PTRELA Q+ I A MN+
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNI 103
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 76.6 bits (180), Expect = 5e-13
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+FDS ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 421 TLDTTLR-ETQVLILSPTRELATQIXKVILALGDFMNVQ 534
L R + +I++PTRELA QI VI ALG + ++
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLR 100
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 76.6 bits (180), Expect = 5e-13
Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F+S ++ G+ G+++P+ IQ ++I PI+ G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 421 TLDTTLR-ETQVLILSPTRELATQIXKVILALG 516
+ +T R + L+++PTRELA QI +LG
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLG 94
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 76.6 bits (180), Expect = 5e-13
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Frame = +1
Query: 211 DTSEDVEVIPTFDSMGLRDELLRGIY-TYGFEKPSAIQQRSILPIV---KGRDVIAQAQS 378
D S TF+ +GL ELLRG+Y FEKPS IQ + LP++ R++IAQA +
Sbjct: 78 DPSTPYSSAKTFEDLGLSAELLRGLYGEMKFEKPSKIQAET-LPLILMPPHRNLIAQAHN 136
Query: 379 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNV 531
G+GKT F++ +L +D ++ Q L++ PTREL Q V+ +G + +
Sbjct: 137 GSGKTTCFTLGMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERMGKYTGI 187
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 76.2 bits (179), Expect = 6e-13
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +GL L+RG+ G+ P+ +Q R+I ++ GRD++A AQ+GTGKTA F++ +L
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 424 L-DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQ 534
L +VL+L PTREL Q+ G F +V+
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVR 100
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 76.2 bits (179), Expect = 6e-13
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+++GL E+LR + G P+ IQ++SI ++ GRD++ AQ+GTGKT F + +L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 421 TLDTTLR---ETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ R + L+LSPTRELATQI + +++ +G
Sbjct: 62 KIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVG 108
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 75.8 bits (178), Expect = 9e-13
Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
E++ F ++L GI T G+ + IQ ++I I++GRDV+ AQ+GTGKTA +++
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYAL 69
Query: 409 SILQTL-DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
+LQ L + + + LILSPTR+LA QI + G +++C G ++ R ++
Sbjct: 70 PLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQL 129
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 75.8 bits (178), Expect = 9e-13
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
FD + L DE+L G+ F + + +Q +I PI++GRDVIA AQ+GTGKTA + + IL
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 424 LDTTLRETQV---LILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + V +I++PTRELA QI + + FM V A G
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYG 108
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 75.8 bits (178), Expect = 9e-13
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+S L + + + GF +P+ IQ +SI PI+ G DV+A AQ+GTGKTA F I +L T
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 424 LDTTLR----ETQVLILSPTRELATQIXKVILALGDFMNVQCHACI 549
L + + L+++PTRELA QI +V +G + ++ CI
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRT-VCI 107
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 75.8 bits (178), Expect = 9e-13
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Frame = +1
Query: 220 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 399
E+V+ P F +GL + + R I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+
Sbjct: 217 EEVDDRPLFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTAS 276
Query: 400 FSISILQTLD---TTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
F++ ++ L R + LIL PTRELA Q+ + + G ++ + IG
Sbjct: 277 FTLPMMDILSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIG 330
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 75.8 bits (178), Expect = 9e-13
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILP--IVKGRDVIAQAQSGTGKTATFSISIL 417
F+ GL +E+L I G+EKP+ IQ + +LP + +D+IAQAQ+GTGKTA F I +L
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQ-KIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLL 78
Query: 418 QTLDTTLRE-TQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
+ +D + + +I++PTRELA QI + + +L V+ G ++K++
Sbjct: 79 ERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDL 135
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 75.8 bits (178), Expect = 9e-13
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +1
Query: 232 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 411
++ F LR+E+L+ I + GFE PS +Q +I P ++ +DVI QA+SG GKTA F +S
Sbjct: 126 LLTRFSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLS 185
Query: 412 ILQTLD--TTLRETQVLILSPTRELATQIXK 498
+L +D + Q L+L T ELA QI K
Sbjct: 186 LLHMIDPQAAPHKVQALVLCNTHELAMQIYK 216
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 75.8 bits (178), Expect = 9e-13
Identities = 38/101 (37%), Positives = 66/101 (65%)
Frame = +1
Query: 211 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 390
D E+V+V+ ++S GL +L GI G+++P+ IQ+ + +KG+D++A+A++G+GK
Sbjct: 3 DVEEEVKVVQ-WNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGK 61
Query: 391 TATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILAL 513
T + I I+Q + + T+ LI+ PTREL +QI V+ L
Sbjct: 62 TGAYLIPIVQRI-LHIASTRALIIGPTRELCSQIEAVVREL 101
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 75.8 bits (178), Expect = 9e-13
Identities = 44/114 (38%), Positives = 73/114 (64%), Gaps = 11/114 (9%)
Frame = +1
Query: 199 NVEFDTSED--VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 372
N++ + S D + I +F++ GLR+ +L I G++KP+ +Q+ ++ I+ GRD++A A
Sbjct: 181 NIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACA 240
Query: 373 QSGTGKTATFSISILQTL---------DTTLRETQVLILSPTRELATQIXKVIL 507
Q+G+GKTA F++ I+ TL +T E QV+I+SPTREL QI + I+
Sbjct: 241 QTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIV 294
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/91 (38%), Positives = 56/91 (61%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F + L +L + GF P+ IQ +I +++GRD + +AQ+GTGKTA FS+ +L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALG 516
L+ + + Q ++++PTRELA Q+ I LG
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLG 118
Score = 35.9 bits (79), Expect = 0.85
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
V+ + GG ++ +R L G H+V GTPG V D+I R
Sbjct: 126 VLEIYGGASILDQMRALKSGAHIVVGTPGRVKDLITR 162
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = +1
Query: 226 VEVIP---TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 396
VE+ P F +GL D L + G+ +P+ IQ +++ ++ GRDV AQ+GTGKTA
Sbjct: 126 VEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTA 185
Query: 397 TFSISILQTLDTTLRETQVLILSPTRELATQI 492
F++ IL L R + L+L PTRELA Q+
Sbjct: 186 AFALPILHKLGAHERRLRCLVLEPTRELALQV 217
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +MGL +L+ I G++ P+ IQ+++I I++GRDV+A A++G+GKT F I + +
Sbjct: 40 FQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIPLFEK 99
Query: 424 L-DTTLRE-TQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L ++ + L+L+PTRELA Q K I LG F +++ +G
Sbjct: 100 LKQREIKSGARALVLTPTRELAIQTFKFIKQLGKFTDLKTILVLG 144
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/107 (35%), Positives = 67/107 (62%)
Frame = +1
Query: 184 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 363
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 364 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVI 504
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI + +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/103 (37%), Positives = 61/103 (59%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +G+ +++ GF+ P+ IQ ++I ++ RDVI AQ+G+GKTA F+I ILQ
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + +L+PTRELA QI + + ALG + V+ +G
Sbjct: 166 LWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVG 208
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 75.4 bits (177), Expect = 1e-12
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F++ GL +ELLR +Y+ GF PS IQ +S ++ RD++A A++G+GKT + I
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 421 TLDTTLRETQ----VLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
L +++ +L+LSPTRELATQI L G + C G + KEI
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEI 280
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/108 (37%), Positives = 59/108 (54%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
+++ T + + + L+ T +KPSA+ QR I+P+ G D+I Q+ GT T T
Sbjct: 45 DIVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCC 102
Query: 409 SILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
ILQ LD E Q L+L PT +LA + VI LG F++ + HA G
Sbjct: 103 GILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCG 150
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 414
TF + ++++G+ GF + +Q++ I+PIV R D++ AQ+GTGKTA F I +
Sbjct: 3 TFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGIPL 61
Query: 415 LQTLDTTLRETQVLILSPTRELATQIXKVILALGDFM 525
+Q DT L+ TQ L+L PTREL Q+ + +G ++
Sbjct: 62 IQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYV 98
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+S+GL L+ + G+E+P+ IQ+ ++ P+++G+D++ A +GTGKTA FS+ +LQ
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 421 TLDTTLR---ETQVLILSPTRELATQIXKVILALGDFMNV 531
+ L+L PTRELA Q+ + I G + +
Sbjct: 97 RITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGI 136
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 420
F ++GL + + + GF++PS IQ+++I ++ + D+I QAQ+GTGKTA F + I+Q
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVI 504
++ L++ Q LIL PTRELA Q+ + I
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEI 91
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 74.9 bits (176), Expect = 1e-12
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 417
TF +G+R + ++ I G KP+ IQ+++I ++K D I AQ+GTGKTA F + +L
Sbjct: 3 TFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVL 62
Query: 418 QTLDTTLRETQVLILSPTRELATQIXKVILALGDFMN 528
+D Q LILSPTREL QI K + +++
Sbjct: 63 HHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVD 99
>UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 431
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/115 (36%), Positives = 66/115 (57%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ +GL LL+ + +++P IQ SI P+++G++V+ +Q+G+GKTA FS ILQT
Sbjct: 9 FEELGLDQWLLKLCWKIDYKEPRPIQVLSIPPLLQGKNVLISSQTGSGKTAAFSFPILQT 68
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEIG 588
L +IL+ RELA QI + I G +N++ IG S + K +G
Sbjct: 69 LSQDPYGIFAIILTANRELAVQIAEQIQIFGASVNLRLALLIGGLSSSKQVKLLG 123
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 74.9 bits (176), Expect = 1e-12
Identities = 40/103 (38%), Positives = 61/103 (59%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ +G++ +L + GFEK IQ+ +I ++ GRDV+ QA +GTGKT +SIS+LQ
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ Q LI++PTRELA QI + + + V+ A G
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYG 105
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 259 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 438
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ L+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 439 RETQVLILSPTRELATQIXKVILALGDFM-NVQCHACIG 552
+ VL++ TRELA QI K +M NV+ G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFG 150
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 74.9 bits (176), Expect = 1e-12
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYT-YGFEKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTAT 399
E F+ + L ELL+G++ GF +PS IQ ++ I+ +D+IAQA +G+GKT
Sbjct: 97 ESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTC 156
Query: 400 FSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHAC 546
F + +L +D + TQ + + PTRELA Q V++ +G F + C AC
Sbjct: 157 FVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGITC-AC 204
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 74.5 bits (175), Expect = 2e-12
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Frame = +1
Query: 148 TSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQR 327
T + K +ED ++F+ + + + TF +M L LL+ + + F P+ IQ
Sbjct: 124 TKEKKVKKEKAKAEDQDLIDFEECTNYDTLATFYNMNLSRPLLKAVTSMNFVNPTPIQAA 183
Query: 328 SILPIVKGRDVIAQAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIXK 498
+I + GRD+ A +GTGKTA + + L+ L T+VL+L PTREL Q+ +
Sbjct: 184 TIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGAVTRVLVLVPTRELGVQVYQ 243
Query: 499 VILALGDFMNVQCHACIG 552
V L F +V+ +G
Sbjct: 244 VTKQLSQFTSVEVGLSVG 261
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 414
TF+ +G+ E+ + I G+E P +Q+ ++P + G DV+A AQ+GTGKTA F + +
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEE-VIPYLLGENNDVVALAQTGTGKTAAFGLPL 61
Query: 415 LQTLDTTLRETQVLILSPTRELATQI 492
LQ +D R Q LIL PTREL QI
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQI 87
Score = 36.7 bits (81), Expect = 0.49
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
V+ V GG+++ IR L G H++ TPG + D++ R+
Sbjct: 103 VLPVYGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERK 140
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+FD + L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI IL+
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILE 104
Query: 421 TLDT--TLRETQVLILSPTRELATQI 492
LD+ R+ Q +++ PTRELA Q+
Sbjct: 105 QLDSLEDCRDPQAIVIVPTRELADQV 130
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 74.5 bits (175), Expect = 2e-12
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TFD GL E+L+ I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 421 TL--------DTTLRETQVLILSPTRELATQI 492
L + LIL+PTRELA Q+
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQV 103
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/103 (33%), Positives = 58/103 (56%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
FD M L + + + G+ P+ +Q R+ P ++G+D+I ++++GTGKTA F + +L+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ R + LIL PTRELA Q+ + L ++ A G
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYG 133
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/94 (38%), Positives = 60/94 (63%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F + L+++LL G+ G+E PS IQ++ I + +D++A++++GTGKT +F I ILQ
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQN 76
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFM 525
+ + + +IL PTRELA QI ++ L +M
Sbjct: 77 IYSESYGIESIILVPTRELALQISSLLRKLSKYM 110
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 74.5 bits (175), Expect = 2e-12
Identities = 45/134 (33%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Frame = +1
Query: 160 VSSNXKILSEDLSNVEF-DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI- 333
+ K++ + + +V+ D + I +F + L+ E+L+ + T F+ P+ IQ+ ++
Sbjct: 591 IQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALP 650
Query: 334 -LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILA 510
L + ++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+
Sbjct: 651 LLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEK 710
Query: 511 LGDFM-NVQCHACI 549
+G F+ N++ H I
Sbjct: 711 MGKFIDNLKIHYAI 724
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F + + E+ + + GFE+ S IQ +I I+ +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFM 525
+D+ Q +IL PTRELA Q+ + + L ++
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYL 99
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 74.5 bits (175), Expect = 2e-12
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Frame = +1
Query: 208 FDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTG 387
F+ + + +F M L LL+ I GF++P+ IQ+ I + G+D+ A A +GTG
Sbjct: 208 FEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTG 267
Query: 388 KTATFSISILQTLDTTLRE---TQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRY 558
KTA F++ +L+ L R+ T+VL+L PTREL Q+ V L F N+ +G
Sbjct: 268 KTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGL 327
Query: 559 QSWXRYKEIGLRTA 600
+ +E LR A
Sbjct: 328 D--VKSQEAALRAA 339
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 74.1 bits (174), Expect = 3e-12
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Frame = +1
Query: 121 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDV-EVIPTFDSMGLRDELLRGIYTYG 297
++ ++K + EV N + + S+ + + E+ E I F + G+R + + ++ G
Sbjct: 62 IKKKKVKKEKNGEVQQNGIVKEKPSSSKQGEVDEETQEKIGAFSNFGIRPKTIEKLHAKG 121
Query: 298 FEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL----QTLDTTLRETQVLILS 465
+ IQ ++ PI G DVIAQA++GTGKT +F + ++ Q + R+ +L L+
Sbjct: 122 VKYLFPIQAQTFKPIDDGFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALA 181
Query: 466 PTRELATQIXKVILALGDFMNVQC 537
PTRELA QI + A+G ++ C
Sbjct: 182 PTRELAKQISEYFEAIGPHLSTTC 205
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-Q 420
F S+ L LL+ + GF +P+ IQ +I P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+D T+ L+++PTRELA QI + + L + A G
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFG 106
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 414
+ TF+ M L D L + + F P+ +Q+++I P + GRD++A AQ+GTGKT F I
Sbjct: 26 LTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPA 85
Query: 415 LQTL-DTTLRETQVLILSPTRELATQIXKV 501
L+ L DT QVLIL PTRELA Q+ V
Sbjct: 86 LEMLRDTEPCGVQVLILVPTRELAMQVHGV 115
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/93 (36%), Positives = 56/93 (60%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ L L+ + FEKP+ IQ R I I+K ++I Q+Q+GTGK+ F + ++Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDF 522
+D+ ++E Q ++++PTRELA Q+ L F
Sbjct: 66 IDSEIKEPQAIVVAPTRELAQQLYDAANHLSQF 98
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/108 (33%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 421 TLD----TTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + + L+L+PTRELA Q+ + + G ++ ++ G
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFG 109
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 74.1 bits (174), Expect = 3e-12
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Frame = +1
Query: 184 SEDLSNVEFD-TSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 360
+ED + D S D V +F+ M L ++L+ G+ P+ IQQ I + G+D+
Sbjct: 129 NEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
Query: 361 IAQAQSGTGKTATFSISILQTLDTTLRE---TQVLILSPTRELATQIXKVILALGDFMNV 531
A A +GTGKTA F + IL+ + + T+VL+L PTRELA Q+ +V L F+ +
Sbjct: 189 CACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQL 248
Query: 532 QCHACIG 552
+ C G
Sbjct: 249 EVCLCAG 255
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/103 (36%), Positives = 59/103 (57%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F + ++ R + GFE + IQ ++ + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L+ R Q LI+ PTREL Q+ + I +G +M V+ A G
Sbjct: 66 LEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYG 107
Score = 35.9 bits (79), Expect = 0.85
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
V+ V GG ++G I +L G HV+ TPG + D I R
Sbjct: 102 VLAVYGGQSIGNQIAQLRRGVHVIVATPGRLIDHIER 138
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/92 (36%), Positives = 57/92 (61%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF L +L++ I GFE+ + IQ ++I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALG 516
++ Q ++++PTRELA Q+ + + +G
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIG 95
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 74.1 bits (174), Expect = 3e-12
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F M L +LRG+ + GF KP+ IQ ++I + G+DV+ A +G+GKTA F + IL+
Sbjct: 294 SFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILE 353
Query: 421 TL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEIGL 591
L + T+V+IL+PTRELA Q V + L +++ +G + E+ L
Sbjct: 354 RLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRL 413
Query: 592 R 594
R
Sbjct: 414 R 414
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 73.7 bits (173), Expect = 3e-12
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F S G E+++ + G+EK + IQQ++I +G D+ A AQ+GTGKTA FS+ ++Q
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 421 TL-----DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + + + LI +PTRELA QI I A + N+ A G
Sbjct: 62 QLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFG 110
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/106 (33%), Positives = 62/106 (58%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+ +G+ +L+ I GF+ P+ +Q ++I I+ D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRY 558
+ Q LIL+P RELA Q+ I + ++ + A G++
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQH 109
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 73.7 bits (173), Expect = 3e-12
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Frame = +1
Query: 166 SNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILP-I 342
+N + + ++ N+ + + + + TF+ + + +E+L I G++KP+ IQ R ILP
Sbjct: 133 NNDDVKNGEVKNLVTNEEREKQNV-TFEDLNICEEILESIKELGWKKPTEIQ-REILPHA 190
Query: 343 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDF 522
+D+I +++G+GKTA F I ILQ L + L++SPTREL QI + ALG
Sbjct: 191 FLKKDIIGLSETGSGKTACFIIPILQDLKVNKQSFYALVISPTRELCIQISQNFQALG-- 248
Query: 523 MNVQCHAC 546
MN+ + C
Sbjct: 249 MNLLINIC 256
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 73.7 bits (173), Expect = 3e-12
Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Frame = +1
Query: 190 DLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQ 369
D + E DVE +F+ +GL ++R ++ FE P+ +Q ++I ++GRDV A
Sbjct: 3 DFFDTETPLPNDVE---SFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCAS 59
Query: 370 AQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIXKVILALGDF 522
A +G+GKTA F I ++ L +T +T+ +ILSPTRELA Q V+ + F
Sbjct: 60 AVTGSGKTAAFLIPTVERLLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQF 113
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 414
IP+F + L +++ I G+E+P+ IQQ I I+ G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 415 LQTLDTTLRETQVLILSPTRELATQI 492
++ R Q ++L P+RELA Q+
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQV 88
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 73.7 bits (173), Expect = 3e-12
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 414
+ +F M L +LRG+ + GF KP+ IQ ++I + G+DV+ A +G+GKTA F + I
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334
Query: 415 LQTL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
L+ L + T+V++L+PTRELA Q V L +++ +G + E+
Sbjct: 335 LERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGEL 394
Query: 586 GLR 594
LR
Sbjct: 395 RLR 397
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 73.7 bits (173), Expect = 3e-12
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +MGL LLR I GF P+ IQ+++I +++ RDV+ A++G+GKTA F I +++
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 424 LDTTLRE--TQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + +I+SP+RELA Q KV+ LG +++ +G
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVG 192
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 73.3 bits (172), Expect = 5e-12
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = +1
Query: 223 DVEVIPT----FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 390
DVE++P F + L +L+ + F++PS IQ +I I K +D+IA +Q+G+GK
Sbjct: 6 DVELLPQEPNGFITFNLDPLILKALDKMNFKEPSRIQTEAIPLIQKKQDLIALSQTGSGK 65
Query: 391 TATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
TAT +I I ++T L + Q LI+ PTRELA Q +G + V+ A G
Sbjct: 66 TATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFG 119
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 73.3 bits (172), Expect = 5e-12
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+ + L +LL I + KP+ IQ +I ++ +DV+A A +GTGKTA F + LQ
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQ 61
Query: 421 TL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQS 564
L R+ +VLIL+PTRELA QI KV+ LG + + G + S
Sbjct: 62 FLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFAS 112
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 73.3 bits (172), Expect = 5e-12
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F+ +G+ LL I G+EKP+ IQ R+I I+ DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 421 ----TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
T D R + L+++PTREL+ QI + + + M + +G
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVG 109
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 73.3 bits (172), Expect = 5e-12
Identities = 39/94 (41%), Positives = 63/94 (67%), Gaps = 10/94 (10%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F S+GL + L+R I G+ +P+ +QQR+I +++GRD++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 421 TL------DTTL----RETQVLILSPTRELATQI 492
L D + R+ +VL+L+PTRELA Q+
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQV 95
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/108 (33%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 421 TLD----TTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + + L+L+PTRELA Q+ + + G ++ ++ G
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFG 109
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 73.3 bits (172), Expect = 5e-12
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +MGL LL+ I GF P+ IQ+++I I++ +DV+ A++G+GKTA F I +++
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152
Query: 424 L--DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L +T + LILSP+RELA Q KV+ LG +++ +G
Sbjct: 153 LKSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVG 197
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 72.9 bits (171), Expect = 6e-12
Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F G +L + G++ P+ IQ+ +I ++ GRD++ QAQ+GTGKTA F++ +++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 424 L-DTTLRETQVLILSPTRELATQIXK 498
L D +VL+++PTRELATQ+ +
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAE 138
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +GL +L+ + GF KP+ IQ+R I +++ D++A+AQ+G+GK+A+F + IL+
Sbjct: 3 FSKLGLSQNILQALKQNGFTKPTPIQERVIPLVLERHDIMAKAQTGSGKSASFILPILEL 62
Query: 424 LDTTLRE----TQVLILSPTRELATQIXKVILALGDFMN 528
L E +VL+L+PTREL QI + G FM+
Sbjct: 63 LSRDSYEGKAKIKVLVLTPTRELTQQIVEAFNTFGAFMS 101
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 72.9 bits (171), Expect = 6e-12
Identities = 43/133 (32%), Positives = 66/133 (49%)
Frame = +1
Query: 154 SEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 333
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 334 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILAL 513
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 514 GDFMNVQCHACIG 552
G + ++C +G
Sbjct: 181 GKPITLKCSVIVG 193
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 72.9 bits (171), Expect = 6e-12
Identities = 39/115 (33%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Frame = +1
Query: 181 LSEDLSNVEFDTSEDVEV--IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 354
++ +L+N + TS DVE + F ++ LR +++RG+ F P+ IQ +I + G
Sbjct: 5 IAHNLANGQNRTS-DVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGM 63
Query: 355 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGD 519
D++ Q++SGTGKT + ++ LQ + + +VL++ PTRELA Q+ + LG+
Sbjct: 64 DLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGE 118
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 72.9 bits (171), Expect = 6e-12
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Frame = +1
Query: 184 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 363
SE E + +E +F L + L G+ + KP+AIQ+ SILP ++G+D++
Sbjct: 44 SEIARLTELYATAKIEETSSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDIL 103
Query: 364 AQAQSGTGKTATFSISILQTLDTT----LRETQVLILSPTRELATQIXKVILALGDFMNV 531
A A++G+GKT F I + + L T L LI++PTRELA QI + + +G +
Sbjct: 104 AAAKTGSGKTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAKIGKLHDF 163
Query: 532 QCHACIG 552
IG
Sbjct: 164 TTGLIIG 170
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 72.5 bits (170), Expect = 8e-12
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Frame = +1
Query: 250 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 429
S L LR I G+ P+AIQ ++I I+ GRDV+ AQ+G+GKTA F++ +LQ L
Sbjct: 9 SPALLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLA 68
Query: 430 T----TLRETQVLILSPTRELATQIXKVILALGDFM 525
T R T+ LIL PTRELA Q+ + I ++
Sbjct: 69 NAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYL 104
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 72.5 bits (170), Expect = 8e-12
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Frame = +1
Query: 181 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 360
L + E E+ E TF+ +GL L+R + G EKP++IQ+ +I I++G+DV
Sbjct: 5 LERQQGHAERREQEEDEESKTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEGKDV 64
Query: 361 IAQAQSGTGKTATFSISILQTL--DTTLRE---TQVLILSPTRELATQIXKVILAL 513
+A+A++G+GKT + + +LQ L ++ R +L PTREL Q+ +L+L
Sbjct: 65 VARAKTGSGKTFAYLLPLLQKLFCESESRNKLAPSAFVLVPTRELCQQVYSEVLSL 120
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 72.5 bits (170), Expect = 8e-12
Identities = 38/78 (48%), Positives = 48/78 (61%)
Frame = +1
Query: 259 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 438
L+ ELLR I GFE PS +Q I + G DVI QA+SG GKTA F +S LQ ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 439 RETQVLILSPTRELATQI 492
+ L+L TRELA QI
Sbjct: 113 GQVSALVLCHTRELAYQI 130
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/80 (46%), Positives = 49/80 (61%)
Frame = +1
Query: 259 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 438
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 439 RETQVLILSPTRELATQIXK 498
+ VL++ TRELA QI K
Sbjct: 111 GQVTVLVMCHTRELAFQISK 130
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 72.5 bits (170), Expect = 8e-12
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
EV+ +F + L LLRGI + P+A+Q ++I ++GRD++A++ +GTGKT + +
Sbjct: 44 EVVASFAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQGRDILARSGTGTGKTGAYLL 103
Query: 409 SILQTLDTTLRETQV-LILSPTRELATQIXKVILAL 513
IL +T LR+ + LIL PT+ELA QI KV AL
Sbjct: 104 PILH--NTLLRKGKTSLILVPTKELALQITKVAKAL 137
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 72.5 bits (170), Expect = 8e-12
Identities = 36/118 (30%), Positives = 65/118 (55%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+S+GL L+ + + +KP+ IQ + PI+ GRD I A++G+GKT F++ I++
Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEIGLR 594
+ ++L+PTRELA Q+ + L +G + + +G + +E+ R
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEAR 270
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F + L +L+ I G+++P+ IQ +SI I+ + V+A AQ+GTGKTA F + IL
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILD 61
Query: 421 TLDTTLRE---TQVLILSPTRELATQIXKVILALGDFMNV 531
L E +VLI+SPTRELATQI I ++ +
Sbjct: 62 KLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRI 101
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF +GL L + GF P+ IQQ++I +++GRDV+A AQ+GTGKTA + + ++Q
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 421 TL------DTTLRETQVLILSPTRELATQI 492
L +T + + LIL+PTRELA Q+
Sbjct: 64 MLSRQSREETAPKHPRALILAPTRELAQQV 93
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/105 (31%), Positives = 63/105 (60%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F + L E+ R + G+E P+ +Q I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGR 555
++ + Q L+L+PTRELA Q+ + I +G F ++ A G+
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGK 109
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +1
Query: 238 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 417
P F+ +GL LL + G ++PS IQ ++I P+++G+DV+ +Q+G+GKTA F + +L
Sbjct: 20 PGFEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPML 79
Query: 418 QTLDTT--LRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
Q L + LIL PTRELA Q V LG ++++ G
Sbjct: 80 QKLTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICG 126
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL- 417
TF+ LL + + GF KP+ IQ +I I+ D++A AQ+GTGKTA + + IL
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILH 61
Query: 418 QTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ +++ L+L PTRELA QI + I F+NV A G
Sbjct: 62 KIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYG 106
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F + L +L + F +P+ IQ +I P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 424 LDTTLRE--TQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
L T R+ + LIL+PTRELA QI + +L + ++ +G + ++I
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDI 119
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/104 (31%), Positives = 63/104 (60%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F + + ++LR + G+ +P+ +QQ I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGR 555
+ + Q LIL+PTRELA Q+ + I +G F ++ A G+
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGK 107
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 71.7 bits (168), Expect = 1e-11
Identities = 35/90 (38%), Positives = 57/90 (63%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F L ++ + +KP+ IQ R I +KGRD+I Q+Q+GTGKT +F + I+Q
Sbjct: 4 FSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQN 63
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILAL 513
++ L+E Q +I++PTRELA QI + + ++
Sbjct: 64 VNPELQEMQAIIVAPTRELAWQIHEELKSI 93
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
++ F+S+ L +L+G+ + G+ KPS IQ +I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 409 SILQTL---DTTLRETQVLILSPTRELATQIXKVILALGDFMN 528
I++ L + T+V++L PTRELA Q+ V + F++
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVS 330
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Frame = +1
Query: 223 DVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF 402
DV I +FD + L + L+G+ G+ KP+ IQ+ +I + G+D++ AQ+G+GKT F
Sbjct: 46 DVSTINSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAF 105
Query: 403 SISILQTLD----TTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
I IL+ L T L L+++PTRELA QI + + +G+ IG
Sbjct: 106 LIPILERLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIG 159
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 71.3 bits (167), Expect = 2e-11
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Frame = +1
Query: 130 NXIRKMTSSEVSSNX-KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEK 306
N I+ ++++ N +I+ E+L N+ + +E ++ + +D M + D+LL I +E
Sbjct: 141 NKIKTKPLNQMNENDWRIIRENL-NIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YEN 198
Query: 307 PSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--------TLDTTLRETQVLIL 462
P+ IQ SI +K RD+IA A++GTGKT + I ++Q T +T+ L+L
Sbjct: 199 PTPIQCASIPIALKMRDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVL 258
Query: 463 SPTRELATQIXKVILALGDFMNVQCHACIG 552
+PTRELA QI K L L ++ CIG
Sbjct: 259 APTRELALQIQKETLKLATPFGLRVCCCIG 288
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F S L +L+GI GF K + +QQ++I +K +D++ A++G+GKTA F + +LQ
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 424 LDTTLRE---TQVLILSPTRELATQIXKVILALGDFMNVQ 534
L T T+ LIL PTRELA Q+ K AL F +Q
Sbjct: 62 LLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQ 101
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF+ + + L+ G+ P+ +Q I I++ +D++ +Q+GTGKT + + I +
Sbjct: 3 TFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQNKDLLINSQTGTGKTLAYLLPIFE 62
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVI--LALGDFMNVQCHACIGRYQSWXRYKEI 585
+DT+ RETQ LIL+PT EL QI + LA ++V A IG + K I
Sbjct: 63 KIDTSKRETQALILAPTHELVMQITNQVELLAKNAELSVTSLALIGEVNIQKQIKNI 119
>UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 394
Score = 71.3 bits (167), Expect = 2e-11
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Frame = +1
Query: 181 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR-D 357
+S + V+ D DV FD L ++R I GF P+ IQ+ +LP KGR D
Sbjct: 1 MSAVVDGVDLDRGCDVSAWFEFD---LHPLIMRAIQDCGFTTPTPIQRECLLPATKGRCD 57
Query: 358 VIAQAQSGTGKTATFSISILQ-TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQ 534
+I AQ+G+GKT F++ ILQ L + + LI++PTRELA Q+ ++ A+ + +
Sbjct: 58 IIGAAQTGSGKTLAFALPILQRLLSQGIDVLRALIVAPTRELALQVCAMMRAVAVYTKID 117
Query: 535 CHACIG 552
+G
Sbjct: 118 VCPVVG 123
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 414
+ TF + L + LL + GF +P+AIQ +I P + GRDV+ A +GTGKTA + +
Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPA 62
Query: 415 LQ-TLDTTLRET---QVLILSPTRELATQI 492
LQ LD +++ ++LIL+PTRELA Q+
Sbjct: 63 LQHLLDFPRKKSGPPRILILTPTRELAMQV 92
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+S+ L + I G++ P+ IQ++++ I+ G DV+A A++G+GKTA F I +L+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 424 LDTTLRE--TQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
L + + + LILSPTR+LA Q K LG F +++ +G +++E+
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEEL 145
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/96 (35%), Positives = 58/96 (60%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 414
+P+F + + + GFE+P+ +Q++ I I KG+ VI Q+Q+G+GKT TF + +
Sbjct: 1 MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPL 60
Query: 415 LQTLDTTLRETQVLILSPTRELATQIXKVILALGDF 522
+ + T+ E Q++I +P+RELA QI + L F
Sbjct: 61 MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARF 96
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 548 LGGTNLGXDIRKLDYGQ-HVVSGTPGXVFDMIRRR 649
+GGT+ + KL + Q HVV GTPG + DM+ +
Sbjct: 107 VGGTDKQRQLNKLKHQQPHVVIGTPGRILDMMNEQ 141
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F ++G+ DE++ + G P IQ +I + GRDV+ +A +G+GKT F + +L
Sbjct: 231 FSALGVPDEIVAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSR 290
Query: 424 LDTTLRE---TQVLILSPTRELATQIXKVILALGDFMNV 531
L T RE + LILSPTRELA QI + +L M +
Sbjct: 291 LSATPREDNRPRALILSPTRELAMQIADALSSLASSMGL 329
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 70.9 bits (166), Expect = 2e-11
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Frame = +1
Query: 217 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 396
+ + + F +GL LL+ + G+ P+ IQ ++I ++ GRD++ AQ+GTGKTA
Sbjct: 58 ARETHSLTQFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTA 117
Query: 397 TFSISILQTL-----DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
F++ IL L R + L+LSPTRELATQI + G M + G
Sbjct: 118 AFALPILHRLAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFG 174
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/76 (42%), Positives = 51/76 (67%)
Frame = +1
Query: 265 DELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRE 444
+ LL + T GF + IQQ+SI PI+KG+D++AQ+++G+GKT F I + D +
Sbjct: 12 EALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVKSNK 71
Query: 445 TQVLILSPTRELATQI 492
Q ++++PTRELA Q+
Sbjct: 72 PQTIVITPTRELAEQV 87
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/104 (37%), Positives = 61/104 (58%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF S+G+ L + + Y P+ IQQ+S+ ++GRD A++G+GKT F++ ILQ
Sbjct: 62 TFSSLGVSPMLAQLLNQYTITVPTDIQQKSLPYTMQGRDFCGIARTGSGKTLCFALPILQ 121
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L L+L+PTRELA QI + + A G+ + +Q + IG
Sbjct: 122 ELSQDPYGIFALVLTPTRELALQIEQQMNAYGNPLGIQAQSLIG 165
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/103 (36%), Positives = 55/103 (53%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F S+G + + + G KP+A+QQ + I+ G + I +Q+GTGKTA F++ I+ T
Sbjct: 5 FTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPIIST 64
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L L++SPTRELA QI + G MN IG
Sbjct: 65 LSKDPYGIYALVISPTRELAQQICQQFKIFGRGMNADICPIIG 107
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 70.9 bits (166), Expect = 2e-11
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +MGL LL+ I GF P+ IQ++SI I+ RDV+ A++G+GKTA F I +++
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIER 151
Query: 424 L--DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + + LI+SP+RELA Q KV+ G +++ +G
Sbjct: 152 LRAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVG 196
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 70.5 bits (165), Expect = 3e-11
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Frame = +1
Query: 220 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 399
E ++ +F GL + + R + + P+ IQ ++I + GRDV+ AQ+GTGKTA+
Sbjct: 10 ERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTAS 69
Query: 400 FSISILQTL-----DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
F++ IL L + T+VL+LSPTREL+ QI A G + + IG
Sbjct: 70 FALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIG 125
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 70.5 bits (165), Expect = 3e-11
Identities = 43/104 (41%), Positives = 58/104 (55%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF M L LL + KP+ +Q ++I + G D+IA AQ+G+GKT F++S+L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 421 TLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
TL E + LIL P+RE+A QI KV L L M V IG
Sbjct: 94 TLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIG 136
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 70.5 bits (165), Expect = 3e-11
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F +GL ELL+ + G+E+P+ +Q +I ++ RD+IA AQ+GTGKTA+F + ++
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 421 TL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L R + LIL PTRELA Q+ + G + + IG
Sbjct: 62 ILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIG 108
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 70.5 bits (165), Expect = 3e-11
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F + L LLR + G+ KP+ IQ +SI +++GRD++ AQ+GTGKTA+F++ +L
Sbjct: 9 FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHR 68
Query: 424 LDTTLRE-----TQVLILSPTRELATQI 492
L T R +VL+L+PTREL +QI
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQI 96
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 70.5 bits (165), Expect = 3e-11
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISI 414
F +GL +L+ + G+ P+ IQ+++I P+++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 415 LQTLDTTL--RETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L+ D + + ++L+L+PTREL +QI G ++ + +G
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVG 111
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/106 (33%), Positives = 58/106 (54%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 414
+ +F + L++ + +G++ S IQ +++P++KGRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 415 LQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L ++ Q LIL PTREL+ QI V L + +C G
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHG 114
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F +G+ E++ + G P+ +Q+ I I++G DV+A A++G+GKTA F I ILQ
Sbjct: 2 SFGELGVCPEIVELLRDKGISAPTEVQKGCIPVILEGNDVVACAKTGSGKTAAFLIPILQ 61
Query: 421 TLDTTLRETQVLILSPTRELATQI 492
+L T L+ LI++PTRELA QI
Sbjct: 62 SLMTELKPLYALIITPTRELAHQI 85
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+SM L + + I T GF P+ IQ+++I I++GRDV+A +++G+GKTA F I ++
Sbjct: 301 FESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIPLINK 360
Query: 424 LDTTLR--ETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L R + LI+ PTRELA QI V+ F ++ +G
Sbjct: 361 LQNHSRIVGARALIVVPTRELALQIASVLKTFIKFTDLTYTLIVG 405
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 70.5 bits (165), Expect = 3e-11
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 259 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 438
L+ E+LR I GFE PS +Q I V G D++ QA+SG GKTA F ++ LQ L+ +
Sbjct: 48 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSD 107
Query: 439 RET-QVLILSPTRELATQIXK 498
T VL++ TRELA QI K
Sbjct: 108 NNTCHVLVMCHTRELAFQISK 128
>UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 606
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSI-LPIVKGRDVIAQAQSGTGKTATFSISIL 417
T+DS+ L LL+ I GFE P+ IQ +I L + + RD+IA+A +G+GKTA ++I I+
Sbjct: 21 TWDSLNLDPRLLQAIDKLGFENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYAIPII 80
Query: 418 QTL--DTTLRETQVLILSPTRELATQIXKVILALGDFMN 528
Q + + TQ ++L PTREL+ Q+ + + L F N
Sbjct: 81 QNIMVQGSQLGTQSVVLVPTRELSNQVYQFMEQLIKFSN 119
>UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-8 -
Neurospora crassa
Length = 626
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/99 (36%), Positives = 60/99 (60%)
Frame = +1
Query: 217 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 396
S ++ TFD++ +R L++ + ++P+ IQ+ I I+KGRD I +++G+GKT
Sbjct: 188 SVPIDANTTFDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTV 247
Query: 397 TFSISILQTLDTTLRETQVLILSPTRELATQIXKVILAL 513
F++ ILQ +IL+PTRELA QI + ++AL
Sbjct: 248 AFAVPILQQWAANPSAIFGVILTPTRELALQIMEQVIAL 286
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 70.1 bits (164), Expect = 4e-11
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF M L LL+ I F +P+ IQ+ I + G+D+ A A +GTGKTA F + +L+
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLE 241
Query: 421 TLDTTLRE---TQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L RE T+VL+L PTREL Q+ V L F V +G
Sbjct: 242 RLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVG 288
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 70.1 bits (164), Expect = 4e-11
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF +GL E+L + G+ P+ IQ + I I+ G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 421 TL----DTTL----RETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L +T++ + LI++PTRELA QI + + G ++ ++ G
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFG 117
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F ++GL +L+ + + P IQ+++I I+KG+D++ AQ+G+GKTA+F + ILQ
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 421 TLDT----TLRETQVLILSPTRELATQIXKVILALGD 519
L T R L+L PTRELA Q+ +V A +
Sbjct: 70 MLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSN 106
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 70.1 bits (164), Expect = 4e-11
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Frame = +1
Query: 217 SEDVEVIP-TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKT 393
+E +EV TF +GL +EL+ + G P AIQ R++ + GRD++ +A++G+GKT
Sbjct: 138 AEQIEVAESTFAELGLPEELVAALERRGMTAPFAIQSRTLPDGIAGRDILGRARTGSGKT 197
Query: 394 ATFSISILQTLDTTLR-----ETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
F + +L L R + L+L PTRELA Q+ + LGD ++++ +G
Sbjct: 198 LGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPLGDSLDLRLSVVVG 255
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 70.1 bits (164), Expect = 4e-11
Identities = 36/103 (34%), Positives = 58/103 (56%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +G+ +E+ + +P+ +Q ++I P++ RDV+AQAQ+GTGKT F + IL+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
++ Q LI++PTRELA QI L + + A G
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYG 107
Score = 37.1 bits (82), Expect = 0.37
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
N++ GG ++ +RKL H++ GTPG + D +RR+
Sbjct: 101 NILAAYGGQDVEQQLRKLKGSIHIIIGTPGRLLDHLRRK 139
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 70.1 bits (164), Expect = 4e-11
Identities = 36/103 (34%), Positives = 60/103 (58%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +G+ D ++ + + GF++P+ IQ+ SI ++G D++ QAQ+GTGKT F I +++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ + Q LIL+PTRELA Q+ + + VQ G
Sbjct: 64 V-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFG 105
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
V+ V GG + I+ L G +V GTPG V D + RR
Sbjct: 100 VVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRR 137
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 70.1 bits (164), Expect = 4e-11
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Frame = +1
Query: 127 ANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEK 306
+N ++ SS ++S + V+ S+ + I F S LRD ++ + G++
Sbjct: 208 SNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKI 267
Query: 307 PSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL-----DTTLRETQVLILSPT 471
P+ IQ+ SI I GRD++A AQ+G+GKTA F + IL L + L QV+I+SPT
Sbjct: 268 PTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPT 327
Query: 472 RELATQI 492
RELA QI
Sbjct: 328 RELAIQI 334
>UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 626
Score = 70.1 bits (164), Expect = 4e-11
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Frame = +1
Query: 157 EVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSIL 336
EV ++ + + + ++ E +F+ +GL L+R + G EKP+ IQQ +I
Sbjct: 19 EVEKAEEVEEQRNDREQEEEQKEEEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIP 78
Query: 337 PIVKGRDVIAQAQSGTGKTATFSISILQTL---DTTLRE---TQVLILSPTRELATQIXK 498
I++G+DV+A+A++G+GKT + + +LQ L D+ ++ IL P+REL Q+
Sbjct: 79 YILEGKDVVARAKTGSGKTLAYLLPLLQKLFSADSVSKKKLAPSAFILVPSRELCQQVYT 138
Query: 499 VILALGDFMNVQCHA 543
+ +L + VQ A
Sbjct: 139 EVSSLIELCRVQLKA 153
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 70.1 bits (164), Expect = 4e-11
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F + L +LR + + F KP+ IQ R+I + G+D++A A +G+GKTA F I ++
Sbjct: 334 SFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIE 393
Query: 421 TLDTTLR-------ETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYK 579
L + +++VLIL+PTRELA Q V ++ F +++ C+G +
Sbjct: 394 RLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVKSQEA 453
Query: 580 EIGLR 594
E+ LR
Sbjct: 454 ELKLR 458
>UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Pichia guilliermondii (Yeast) (Candida guilliermondii)
Length = 586
Score = 70.1 bits (164), Expect = 4e-11
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Frame = +1
Query: 217 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI-LPIVKGRDVIAQAQSGTGKT 393
SE ++ +++ L LL+ +Y GFEKP+ IQ +I L + RD+IA+A +G+GKT
Sbjct: 28 SEYLDESAKWENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLEDKRDIIAKASTGSGKT 87
Query: 394 ATFSISILQT-LDTTLRETQV--LILSPTRELATQIXKVILALGDFMN 528
+SI I+Q L L E + +IL PT+ELA Q+ K I L + N
Sbjct: 88 GAYSIPIIQNILSEGLSEHNIKSVILVPTKELANQVTKFIEKLLVYCN 135
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/93 (39%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +MGL LL+ I GF+ P+ IQ++++ I++G DV+ A++G+GKTA F I +++
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 424 LDTTLRE--TQVLILSPTRELATQIXKVILALG 516
L T + + +I+SP+RELA Q KV+ G
Sbjct: 140 LKTHSAKVGARGVIMSPSRELALQTLKVVKEFG 172
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 69.7 bits (163), Expect = 6e-11
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F ++G+ LL+G+ G +P IQ ++I ++G+D++ AQ+G+GKTA FS+ ILQ
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148
Query: 424 L----DTTLRET-QVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
+ D +T + LIL+PTRELA QI + I + ++ +G + K I
Sbjct: 149 IIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRI 207
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 69.7 bits (163), Expect = 6e-11
Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Frame = +1
Query: 178 ILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 357
+ ++D S + + D TF+ + L E +R I G+ P+ IQ +I +++G+D
Sbjct: 4 VSAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKD 63
Query: 358 VIAQAQSGTGKTATFSISILQTL---DTTLR-ETQVLILSPTRELATQIXKVILALGDFM 525
++A AQ+GTGKTA F + I++ L D R + L+L+PTRELA Q+ A ++
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYL 123
Query: 526 NVQCHACIG 552
++ A G
Sbjct: 124 ALRSDAVFG 132
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F + L EL + G+E+P+ IQ ++I +++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 421 TLDTT----LRETQVLILSPTRELATQIXKVILALG 516
L R + L+L+PTRELA Q+ L G
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYG 100
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,418,952
Number of Sequences: 1657284
Number of extensions: 10495730
Number of successful extensions: 31860
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 29560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31214
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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