Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_C13
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 181 5e-46
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 178 4e-45
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 156 2e-38
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 153 9e-38
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 95 6e-20
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 91 9e-19
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 91 9e-19
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 80 2e-15
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 79 3e-15
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 76 3e-14
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 75 4e-14
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 75 5e-14
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 70 1e-12
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 65 4e-11
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 65 5e-11
08_01_0397 - 3509186-3510291,3510322-3512335 64 7e-11
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 64 1e-10
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 63 2e-10
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 62 3e-10
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 62 3e-10
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 62 5e-10
03_05_0865 - 28365430-28367640 61 9e-10
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 60 2e-09
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 60 2e-09
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 57 1e-08
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 56 3e-08
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 56 3e-08
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 54 1e-07
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 54 1e-07
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 54 1e-07
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 54 1e-07
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 53 2e-07
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 53 2e-07
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 52 3e-07
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 51 9e-07
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 51 9e-07
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 51 9e-07
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 51 9e-07
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 51 9e-07
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 51 9e-07
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 50 1e-06
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 49 4e-06
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 49 4e-06
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 48 7e-06
06_03_1255 + 28780181-28781172,28782065-28782932 48 9e-06
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 46 3e-05
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 45 5e-05
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 45 6e-05
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 44 8e-05
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 43 2e-04
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 43 2e-04
02_01_0381 - 2764331-2764342,2768966-2769907 42 3e-04
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 39 0.003
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 37 0.012
04_04_0919 - 29422003-29422267,29422411-29422660,29423163-294234... 34 0.11
04_01_0629 - 8279609-8280244 29 2.4
09_04_0706 + 19627024-19627380,19629945-19629976,19630657-196307... 29 3.2
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 28 5.6
01_07_0233 + 42191465-42191953,42191976-42192272,42192310-42192690 28 5.6
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 181 bits (440), Expect = 5e-46
Identities = 83/121 (68%), Positives = 101/121 (83%)
Frame = +1
Query: 190 DLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQ 369
D N+ F+TS VEVI +FD MG+RD+LLRGIY YGFEKPSAIQQR++LPI+ GRDVIAQ
Sbjct: 15 DDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQ 74
Query: 370 AQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACI 549
AQSGTGKT+ S+S+ Q +DT +RE Q LILSPTRELA Q +V+LA+GDF+N+Q HACI
Sbjct: 75 AQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACI 134
Query: 550 G 552
G
Sbjct: 135 G 135
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +2
Query: 548 LGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+GG ++G DIRKL++G HVVSGTPG V DMI+RR
Sbjct: 134 IGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRR 167
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 178 bits (433), Expect = 4e-45
Identities = 81/121 (66%), Positives = 101/121 (83%)
Frame = +1
Query: 190 DLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQ 369
D N+ F+TS VEVI +FD MG+R++LLRGIY YGFEKPSAIQQR++LPI+ GRDVIAQ
Sbjct: 15 DDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQ 74
Query: 370 AQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACI 549
AQSGTGKT+ S+S+ Q +DT +RE Q LILSPTRELA Q +V+LA+GD++N+Q HACI
Sbjct: 75 AQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACI 134
Query: 550 G 552
G
Sbjct: 135 G 135
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +2
Query: 548 LGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+GG ++G DIRKL++G HVVSGTPG V DMI+RR
Sbjct: 134 IGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRR 167
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 156 bits (378), Expect = 2e-38
Identities = 79/118 (66%), Positives = 90/118 (76%)
Frame = +1
Query: 199 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 378
N EF TS D EV +FD MGL++ LLRGIY YGFEKPSAIQQR I+P KG DVI QAQS
Sbjct: 29 NEEFFTSYD-EVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQS 87
Query: 379 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
GTGKTATF ILQ LD L E Q L+L+PTRELA QI KV+ ALGD++ V+ HAC+G
Sbjct: 88 GTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 145
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2
Query: 548 LGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+GGT++ D R L G HVV GTPG VFDM+RR+
Sbjct: 144 VGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQ 177
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 153 bits (372), Expect = 9e-38
Identities = 77/116 (66%), Positives = 89/116 (76%)
Frame = +1
Query: 205 EFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGT 384
EF TS D EV +FD MGL++ LLRGIY YGFEKPSAIQQR I+P KG DVI QAQSGT
Sbjct: 31 EFFTSYD-EVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 89
Query: 385 GKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
GKTATF ILQ LD + E Q L+L+PTRELA QI KV+ ALGD++ V+ HAC+G
Sbjct: 90 GKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 145
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2
Query: 548 LGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+GGT++ D R L G HVV GTPG VFDM+RR+
Sbjct: 144 VGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQ 177
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 94.7 bits (225), Expect = 6e-20
Identities = 48/103 (46%), Positives = 65/103 (63%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ L+ ELL GIY GFE+PS IQ+ SI + G D++A+A++GTGKTA F I L+
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+D QV+IL PTRELA Q +V LG ++N+Q G
Sbjct: 209 IDPEKNAIQVVILVPTRELALQTSQVCKELGKYLNIQVMVSTG 251
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
VM+ GGT+L DI +L H++ GTPG + D+ R+ +
Sbjct: 246 VMVSTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTRKGI 284
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 90.6 bits (215), Expect = 9e-19
Identities = 47/103 (45%), Positives = 63/103 (61%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ L+ ELL GIY GFE+PS IQ+ SI + G D++A+A++GTGKTA F I L+
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 185
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+D QV+IL PTRELA Q +V LG + +Q G
Sbjct: 186 IDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTG 228
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
VM+ GGT+L DI +L H++ GTPG + D+ ++ V
Sbjct: 223 VMVTTGGTSLKDDIVRLYQPVHLLVGTPGRILDLTKKGV 261
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 90.6 bits (215), Expect = 9e-19
Identities = 47/103 (45%), Positives = 63/103 (61%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ L+ ELL GIY GFE+PS IQ+ SI + G D++A+A++GTGKTA F I L+
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 195
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+D QV+IL PTRELA Q +V LG + +Q G
Sbjct: 196 IDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTG 238
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
VM+ GGT+L DI +L H++ GTPG + D+ ++ +
Sbjct: 233 VMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILDLTKKGI 271
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 79.8 bits (188), Expect = 2e-15
Identities = 46/128 (35%), Positives = 70/128 (54%)
Frame = +1
Query: 211 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 390
D + V TF +GL L+ + G P+A+Q+R I ++GRDV+ A++G+GK
Sbjct: 68 DDAAAAAVPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGK 127
Query: 391 TATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWX 570
TA F++ IL L L L+PTRELA Q+ + ALG + ++C A IG + S
Sbjct: 128 TAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLG 187
Query: 571 RYKEIGLR 594
+ K + R
Sbjct: 188 QAKGLARR 195
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 79.0 bits (186), Expect = 3e-15
Identities = 42/116 (36%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+SMGL +E+ RG+ G+ P+ IQ++++ I+ G D+ A A++G+GKTA F + ++Q
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 87
Query: 424 L--DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
L + LILSPTR+LATQ K LG F +++ +G +++E+
Sbjct: 88 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEEL 143
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 75.8 bits (178), Expect = 3e-14
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F + L LLR G++KP+ IQ I + GRD+ A +G+GKTA FS+ +L+
Sbjct: 195 SFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLE 254
Query: 421 TL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEIGL 591
L + +VLIL+PTRELA Q+ +I L F +++C +G + + +E+ L
Sbjct: 255 RLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLST--KVQEVAL 312
Query: 592 RT 597
R+
Sbjct: 313 RS 314
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/108 (37%), Positives = 59/108 (54%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
+++ T + + + L+ T +KPSA+ QR I+P+ G D+I Q+ GT T T
Sbjct: 658 DIVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCC 715
Query: 409 SILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
ILQ LD E Q L+L PT +LA + VI LG F++ + HA G
Sbjct: 716 GILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCG 763
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 74.9 bits (176), Expect = 5e-14
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYT-YGFEKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTAT 399
E F+ + L ELL+G++ GF +PS IQ ++ I+ +D+IAQA +G+GKT
Sbjct: 97 ESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTC 156
Query: 400 FSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHAC 546
F + +L +D + TQ + + PTRELA Q V++ +G F + C AC
Sbjct: 157 FVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGITC-AC 204
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF +G+ EL+ G+++P+ IQ +I ++GRD+I Q+G+GKT F++ I+Q
Sbjct: 42 TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQ 101
Query: 421 TL--DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L + +LSPTRELA QI + ALG + + C +G
Sbjct: 102 ALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVG 147
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 65.3 bits (152), Expect = 4e-11
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +1
Query: 295 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT-LDTTLRET-QVLILSP 468
G++ P+ IQ I ++GRDVI Q+G+GKTA F++ I+Q L+ R +L+P
Sbjct: 2 GWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAP 61
Query: 469 TRELATQIXKVILALGDFMNVQCHACIG 552
TRELA QI K ALG +++QC IG
Sbjct: 62 TRELAIQIAKQFEALGSAISLQCSVLIG 89
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 64.9 bits (151), Expect = 5e-11
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS--- 411
TF S G E+LR + GF P+ IQ +S ++ RD++A A++G+GKT + I
Sbjct: 181 TFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFI 240
Query: 412 ILQTLDTTLRE-TQVLILSPTRELATQI 492
+L+ L R+ VL+LSPTRELATQI
Sbjct: 241 LLKRLQHNSRDGPTVLVLSPTRELATQI 268
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 551 GGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
GG G +R L+ G +V TPG + D++ R
Sbjct: 288 GGAPKGPQLRDLERGADIVVATPGRLNDILEMR 320
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 64.5 bits (150), Expect = 7e-11
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Frame = +1
Query: 121 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 300
+E I KM + EV++ K L ++ + + I T+ GL +LL I GF
Sbjct: 390 IEVKDITKMAAEEVAAYRKQLE-----LKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGF 444
Query: 301 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----VLILS 465
EKP +IQ +++ I+ GRD I A++G+GKT F + +L+ + LI++
Sbjct: 445 EKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMA 504
Query: 466 PTRELATQIXKVILALGDFMNVQCHACIG 552
PTREL QI I + + C A G
Sbjct: 505 PTRELVVQIHSDIKKFSKALGINCVAIYG 533
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMI 640
N + + GG+ + I +L G +V TPG + D++
Sbjct: 527 NCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDIL 562
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 63.7 bits (148), Expect = 1e-10
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Frame = +1
Query: 124 EANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFE 303
E + M+ EV+ K L+ +S FD ++ +F G +L+ I G+E
Sbjct: 186 EKPSVSGMSEQEVADYMKSLAIRVSG--FDVPRPIK---SFADCGFPVQLMNAIAKQGYE 240
Query: 304 KPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI-SILQTLDTTLRETQV----LILSP 468
KP+ IQ +++ ++ GRD+I A++G+GKTA F + I+ +D E + ++ +P
Sbjct: 241 KPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAP 300
Query: 469 TRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
TRELA QI N++ A G + ++KE+
Sbjct: 301 TRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKEL 339
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 62.9 bits (146), Expect = 2e-10
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Frame = +1
Query: 121 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 300
+E I MT EV++ K L ++ + + I T+ GL +LL I GF
Sbjct: 251 IEVKDITMMTGEEVATYRKNLE-----LKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGF 305
Query: 301 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL----DTTLRETQV-LILS 465
EKP IQ +++ I+ GRD I A++G+GKT F + +L+ + + + LI++
Sbjct: 306 EKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMA 365
Query: 466 PTRELATQIXKVILALGDFMNVQCHACIG 552
PTREL QI I + + C A G
Sbjct: 366 PTRELVVQIHSDIKKFAKSLGINCVAIYG 394
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMI 640
N + + GG+ + I +L G +V TPG + D++
Sbjct: 388 NCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDIL 423
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 62.5 bits (145), Expect = 3e-10
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 7/108 (6%)
Frame = +1
Query: 220 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 399
E+ E +FD +GL ++L R + G +K + IQ+ +I I++G+DV+A+A++G+GKT
Sbjct: 77 EEEEREVSFDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFA 136
Query: 400 FSISILQTL-----DTTLRET--QVLILSPTRELATQIXKVILALGDF 522
+ + +L L + +R++ V IL PTREL Q+ +L +F
Sbjct: 137 YLLPMLHELLKLSAEGRIRKSAPNVFILVPTRELCQQVHNEASSLLEF 184
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
FD + L+ I G+EK + +Q+ ++ I++G DV+A+A++GTGKT F + ++
Sbjct: 76 FDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIEL 135
Query: 424 LDTTLRETQV--LILSPTRELATQI 492
L T R + L++ PTRELA Q+
Sbjct: 136 LSTLPRSPSINLLVICPTRELANQV 160
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 61.7 bits (143), Expect = 5e-10
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
TF++ G E+L+ I+ GF P+ IQ ++ ++ RD++A A++G+GKT + I
Sbjct: 605 TFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFI 664
Query: 421 TL----DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
L + + VL+L+PTRELA+QI + G V C G + +E+
Sbjct: 665 HLRRYQNNPMLGPTVLVLAPTRELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLREL 723
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 551 GGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
GGT+ G +R+L+ G +V TPG + D++ R
Sbjct: 712 GGTSKGLQLRELERGADIVVATPGRLNDILEMR 744
>03_05_0865 - 28365430-28367640
Length = 736
Score = 60.9 bits (141), Expect = 9e-10
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Frame = +1
Query: 121 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 300
++ + +K + +I ED N+ + S+ + + L ELLR + G+
Sbjct: 277 VDRHWTQKSLDEMTERDWRIFREDF-NISYKGSKVPRPMRKWSESKLGTELLRAVEKAGY 335
Query: 301 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISILQTLDTTLRETQ-----VL 456
++PS IQ SI ++ RDVI A++G+GKTA F +S + L E + +
Sbjct: 336 KEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAV 395
Query: 457 ILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+++PTRELA QI + + ++ ++ + +G
Sbjct: 396 VMAPTRELAQQIEEETVKFATYLGIKVVSIVG 427
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
V+ ++GG ++ K+ G VV TPG + D + RR
Sbjct: 422 VVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCLERR 459
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+F +G DE+L + ++GF +PS IQ + P+++G+ I QSG+GKT + ++Q
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQ 300
Query: 421 TL---------DTTLRETQVLILSPTRELATQI 492
L ++ R +V++L+PT ELA+Q+
Sbjct: 301 NLRKEEVEGLHRSSPRNPRVVVLTPTAELASQV 333
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +1
Query: 265 DELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRE 444
+ +L+ G+ P+ +Q++S+ ++ G+D I AQ+G+GKT + +S+ +D
Sbjct: 50 EHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLSVFSAIDFGRSS 109
Query: 445 TQVLILSPTRELATQIXKV 501
Q L++ PTREL Q+ KV
Sbjct: 110 VQALVVVPTRELGMQVTKV 128
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISI 414
FD + L+ + G+E+ + +Q+ ++ I++G+DV+A+A++GTGKT F +I +
Sbjct: 8 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEV 67
Query: 415 LQTLDTTLRE-----TQVLILSPTRELATQI 492
L L + R+ +L++ PTRELA Q+
Sbjct: 68 LSALPNSRRDQLRPSINLLVMCPTRELAIQV 98
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = +1
Query: 307 PSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELAT 486
P +Q I + G DVI QA+SG GKTA F +S LQ +D + L+L TRELA
Sbjct: 46 PPKVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAY 105
Query: 487 QI 492
QI
Sbjct: 106 QI 107
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---S 405
I +F++ G E+L+ I GF P+ IQ +S ++ +DV+A A++G+GKT +
Sbjct: 149 ITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPG 208
Query: 406 ISILQTLDTTLRE-TQVLILSPTRELATQIXKVILALG 516
++ L R VL+L+PTRELATQI + + G
Sbjct: 209 FMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFG 246
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 551 GGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
GG G +R LD G VV TPG + D++ R
Sbjct: 258 GGAPKGPQLRDLDRGVDVVVATPGRLNDILEMR 290
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Frame = +1
Query: 295 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRE-------TQV 453
GFE+PS IQ + ++ GRD I A +G+GKT F + L + + E +V
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRV 170
Query: 454 LILSPTRELATQIXKVILALG 516
L+LSPTRELA QI V+ G
Sbjct: 171 LVLSPTRELAQQIADVLCEAG 191
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 551 GGTNLGXDIRKLDYGQHVVSGTPGXVFDMI 640
GGT+ G I L G +V GTPG + D+I
Sbjct: 203 GGTSKGPQISALKSGVDIVIGTPGRMKDLI 232
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F++ GL + +LR + G+E P+ +Q+ S+ + GRD++A AQ+G+GKTA F + ++
Sbjct: 86 FEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTGSGKTAAFCLPVVSG 145
Query: 424 L----------------DTTLRETQVLILSPTRELATQ 489
L + + + L+L+PTRELA Q
Sbjct: 146 LVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQ 183
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
V++ GGT + +R L+ G ++ TPG + DM+ R
Sbjct: 224 VVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVER 260
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 54.0 bits (124), Expect = 1e-07
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Frame = +1
Query: 121 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 300
+E ++ M+ +VS + D++ D + V F D ++ I GF
Sbjct: 122 VECPAVQAMSDMDVSQYRR--QRDITVEGHDVPKPVRY---FQEANFPDYCMQAIAKSGF 176
Query: 301 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----VLILS 465
+P+ IQ + +KGRD+I AQ+G+GKT ++ + L + R Q VLIL+
Sbjct: 177 VEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILA 236
Query: 466 PTRELATQIXKVILALGDFMNVQCHACI 549
PTRELA QI + G + + CI
Sbjct: 237 PTRELAVQIQQESGKFGSYSRTR-STCI 263
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 545 VLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMI 640
+ GG G IR L G +V TPG + DM+
Sbjct: 263 IYGGAPKGPQIRDLRRGVEIVIATPGRLIDML 294
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = +1
Query: 316 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQI 492
+Q I + G DVI QA+SG GKTA F +S LQ +D + L+L TRELA QI
Sbjct: 62 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQI 120
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 GLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTT 435
G L+ + GF++P+ IQ+++I ++ GR+ A A +G+GKT F IL +
Sbjct: 152 GCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPG 211
Query: 436 LRE-TQVLILSPTRELATQ 489
+E + +IL PTRELA Q
Sbjct: 212 SKEGVKAVILCPTRELAAQ 230
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISI 414
F + + D I + + IQ RSI P++ G DV+A A++G+GKT F +I +
Sbjct: 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIEL 147
Query: 415 LQTLDTTLRE-TQVLILSPTRELATQIXKV 501
L L + R T V++L PTRELA Q V
Sbjct: 148 LCRLRFSPRNGTGVIVLCPTRELAIQTHNV 177
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 52.4 bits (120), Expect = 3e-07
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 21/120 (17%)
Frame = +1
Query: 196 SNVEFDTSEDVEV----------IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV 345
+ + FD ED+ V + TF + L D L I + KP+ +Q+ +I +
Sbjct: 213 TGINFDAYEDIPVETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISI 272
Query: 346 KGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----------VLILSPTRELATQI 492
GRD++A AQ+G+GKTA F I+ + ++ R Q LILSPTREL+ QI
Sbjct: 273 AGRDLMACAQTGSGKTAAFCFPIISGIMSS-RPPQRPRGSRTAYPLALILSPTRELSVQI 331
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
V++ GG + +R+L+ G ++ TPG + D++ R
Sbjct: 346 VVVAYGGAPIHQQLRELERGVEILVATPGRLMDLLER 382
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/88 (29%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Frame = +1
Query: 253 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL-- 426
+G+ +++ + + G K IQ+ + P ++G+D++ +A++GTGKT F I IL +
Sbjct: 103 LGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIR 162
Query: 427 ----DTTLRETQVLILSPTRELATQIXK 498
++ + ++L+PTRELA Q+ +
Sbjct: 163 HNEKNSPGKFPLAIVLAPTRELAKQVER 190
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +2
Query: 515 EIS*TFNV--MLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
E S + NV + V GGT + IR+L+YG VV GTPG V D+++R
Sbjct: 191 EFSDSSNVETICVYGGTPISQQIRQLNYGVDVVIGTPGRVIDLLKR 236
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 50.8 bits (116), Expect = 9e-07
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Frame = +1
Query: 247 DSMGLRDELLRGIYTYGFEKPSAIQ-QRSIL-PIVKGRDVIAQAQSGTGKTATFSISILQ 420
+S+ L I PS+++ +R++L P ++G+D+I +A++GTGKT F I I+
Sbjct: 94 ESLELGQACCGSIMVDSITPPSSVETERAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMD 153
Query: 421 TL------DTTLRETQVLILSPTRELATQIXK 498
+ + + R +IL+PTRELA Q+ K
Sbjct: 154 RILRHNEKNGSGRNPLAIILAPTRELARQVEK 185
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 539 MLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
+ V GG + +R L+YG VV GTPG + D++RR V
Sbjct: 196 LCVYGGVPISHQMRALNYGVDVVVGTPGRIIDLLRRGV 233
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 50.8 bits (116), Expect = 9e-07
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 27/164 (16%)
Frame = +1
Query: 142 KMTSSEVSSNXKILS-EDLSNVEFDTSEDV----EVIPTFDSMGLRDELLRGIYTYGFEK 306
KM S E S+ + +D +++E D ++ + + + + + L L+ + GF++
Sbjct: 105 KMESKEDVSDDNVEDMQDGNDMEQDNNDGLILGEDEVYAWRELRLHPLLITAVRRLGFKE 164
Query: 307 PSAIQQRSILPIV--KGRDVIAQAQSGTGKTATFSISILQ------------------TL 426
P+ IQ ++ P +G+DVI A++G+GKT F + ILQ T
Sbjct: 165 PTPIQ-KACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQ 223
Query: 427 DTTLRET--QVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
D RE+ + LIL+PTRELA Q+ + F+ +Q +G
Sbjct: 224 DENSRESPLRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVG 267
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 50.8 bits (116), Expect = 9e-07
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Frame = +1
Query: 331 ILPIVKGRDVIAQAQSGTGKTATFSISILQTL-----DTTLRE---TQVLILSPTRELAT 486
++P + GRD+IA+A++GTGKT F I +++ L ++R +VL+L+PTRELA
Sbjct: 161 LIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAK 220
Query: 487 QIXKVILALGDFMNVQC 537
Q+ K I ++ C
Sbjct: 221 QVEKEIKESAPKLSTVC 237
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMI 640
+ + V GG + L G VV GTPG + D+I
Sbjct: 234 STVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLI 269
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 50.8 bits (116), Expect = 9e-07
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F +G+ + R I + + IQ RSI ++ G+DV+ A++G+GKT F I ++
Sbjct: 98 FSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEM 157
Query: 424 LD----TTLRETQVLILSPTRELATQIXKV 501
L T V+++ PTRELA Q V
Sbjct: 158 LHHAHFMPRNGTGVVVVCPTRELAIQTHNV 187
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 50.8 bits (116), Expect = 9e-07
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Frame = +1
Query: 220 EDV-EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 396
EDV + I F S GL ++L+ + G+ P+ +Q + I + R ++ A +G+GKTA
Sbjct: 175 EDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTA 234
Query: 397 TFSISILQTLD-------TTLRETQVLILSPTRELATQIXKVILALG 516
+F + I+ T + ++L+PTREL Q+ + LG
Sbjct: 235 SFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLG 281
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 530 FNVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
F LV+GG L I +++ G ++ GTPG + D++ +
Sbjct: 286 FKTALVVGGDPLAQQIYRIENGIELIVGTPGRLIDLLMK 324
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL- 417
TF + L D L I + KP+ +Q+ +I + GRD++A AQ+G+GKTA F I+
Sbjct: 324 TFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIIS 383
Query: 418 ---------QTLDTTLRETQVLILSPTRELATQI 492
++ + LILSPTREL+ QI
Sbjct: 384 GIMRSRPPPRSRGSRTAYPLALILSPTRELSVQI 417
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
V++ GG + +R+L+ G ++ TPG + D++ R
Sbjct: 432 VVVAYGGAPITQQLRELERGVEILVATPGRLMDLLER 468
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Frame = +1
Query: 157 EVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSIL 336
E N ++L + E E + F+ G+ ++ + G+ + + +Q+ ++
Sbjct: 316 EEIKNREVLGAERRRYE-SRGESLFTNKRFEECGISPLTVKALTDAGYVQTTVVQETALP 374
Query: 337 PIVKGRDVIAQAQSGTGKTATFSISILQTL------DTTLRETQV--LILSPTRELATQI 492
++G+DV+ +A++GTGK+A F + ++++ T R + + LIL PTRELA Q+
Sbjct: 375 MCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQL 434
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-- 417
F +G + +L+ I GF +P+ IQ + ++GRD+I A++G+GKT + + +
Sbjct: 93 FRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVH 152
Query: 418 ---QTLDTTLRETQVLILSPTRELATQIXKVILALG 516
Q + VL+L+PTRELA QI + G
Sbjct: 153 VNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 188
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 205 EFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGT 384
E VEV+ +F+ +GL +E++ + G KP+ IQ + ++ G V+ + +G+
Sbjct: 99 ELQQKRRVEVVDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGS 158
Query: 385 GKTATFSISILQ-TLDTTLR 441
GKT + + ++Q ++ T R
Sbjct: 159 GKTLAYLLPLVQIEIENTYR 178
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 47.6 bits (108), Expect = 9e-06
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS-IL 417
+F + L + +LR + G EKP+ IQ + + + GRD+I A +G+GKT F + I+
Sbjct: 174 SFGDLRLPEPILRALRGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIM 233
Query: 418 QTLDTTLRETQV-------LILSPTRELATQIXKVI 504
L + V LI+ P+RELA Q +VI
Sbjct: 234 AALQEEILMPIVPGEGPFGLIVCPSRELARQTHEVI 269
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 539 MLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+L +GG ++ + + G H+V TPG + D++ ++
Sbjct: 287 LLCIGGVDMRTQMEVVKKGVHIVVATPGRLKDLLSKK 323
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +1
Query: 250 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL- 426
S L E+++ + GF + + +Q +I ++ +DV A +G+GKT F + +++ L
Sbjct: 27 SPALSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILR 86
Query: 427 ----DTTLRETQVLILSPTRELATQIXKV 501
E +I+SPTREL++QI V
Sbjct: 87 RRPSPPKPHEVLGIIISPTRELSSQIYNV 115
Score = 34.7 bits (76), Expect = 0.065
Identities = 14/37 (37%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +2
Query: 539 MLVLGGTNLGXDIRKLDY-GQHVVSGTPGXVFDMIRR 646
ML++GG ++ +++KL+ G +++ GTPG +FD++ R
Sbjct: 129 MLLVGGFDIKAELKKLEEEGANILVGTPGKLFDVMER 165
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 45.2 bits (102), Expect = 5e-05
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYT-YGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SI 408
+F +GL L + GF+ P+ IQ ++I + G+ ++ +A +GTGKT + +
Sbjct: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
Query: 409 SILQTLDTTLRETQ---VLILSPTRELATQI 492
+LQ + + T L+L PTREL Q+
Sbjct: 84 HLLQMREPRVERTDGTFALVLVPTRELCLQV 114
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = +1
Query: 235 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 414
+P D ++ GI ++ F A +I P RD+ + +G+GKT +++ I
Sbjct: 37 LPRLDPRLVKPLQRMGIESF-FPVQVAAWLETIGPGAFERDICINSPTGSGKTLAYALPI 95
Query: 415 LQTLDT-TLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIGR 555
+Q L T +R + L++ PTR+LA Q+ +V A+ + + + +G+
Sbjct: 96 VQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVVGLSVGSAVGQ 143
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 44.4 bits (100), Expect = 8e-05
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 22/121 (18%)
Frame = +1
Query: 196 SNVEFDTSEDVEV----------IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV 345
+ + FD ED+ V + TF + L L I + +P+ +Q+ +I +
Sbjct: 131 TGINFDAYEDIPVETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISL 190
Query: 346 KGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQ----------VLILSPTRELATQ 489
GRD++A AQ+G+GKTA F I+ + + Q LILSPTREL+ Q
Sbjct: 191 AGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQ 250
Query: 490 I 492
I
Sbjct: 251 I 251
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
V++ GG + +R L+ G ++ TPG + D++ R
Sbjct: 266 VVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLER 302
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/62 (29%), Positives = 37/62 (59%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
+++S+G+ D L ++ G +PS +Q I ++ DVI A++G+GKT + + +++
Sbjct: 83 SWESLGVSDRLASALHGAGLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLIE 142
Query: 421 TL 426
L
Sbjct: 143 KL 144
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
FD + L ++ G+ G+ + S IQ+ ++ + GRDV+ A++G+GKT F I +L +
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLMS 141
Query: 424 LDT 432
T
Sbjct: 142 AAT 144
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS-ILQ 420
F + L + +LR + G +P+ IQ + + ++ GRD+I A +G+GKT F + I+
Sbjct: 184 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 243
Query: 421 TLDTTLRETQV-------LILSPTRELATQIXKVI 504
L + V +I+ P+RELA Q VI
Sbjct: 244 ALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVI 278
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Frame = +1
Query: 259 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL---- 426
+ + L + + G + IQ + ++ G D++ +A++G GKT F + IL++L
Sbjct: 111 ISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGT 170
Query: 427 DTTLRETQ------VLILSPTRELATQI 492
R T VL+L PTRELA Q+
Sbjct: 171 HKASRRTDYGRPPTVLVLLPTRELAKQV 198
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Frame = +1
Query: 349 GRDVIAQAQSGTGKTATFSISILQTL--------DTTLRETQVLILSPTRELATQ 489
G+DV+A+A++GTGKT F + ++ + D V+++ PTRELA Q
Sbjct: 492 GKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELADQ 546
>04_04_0919 -
29422003-29422267,29422411-29422660,29423163-29423481,
29423625-29424794,29424879-29425388,29425449-29425607
Length = 890
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 349 GRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ--VLILSPTRELATQIXKVILAL 513
GR + GTGKT T S+ +L + T +++ VL +PT +Q+ +LAL
Sbjct: 278 GRFSLIWGPPGTGKTKTISVLLLMLMTTATSQSRYRVLTCAPTNTAISQVASRLLAL 334
>04_01_0629 - 8279609-8280244
Length = 211
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 241 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 372
TF +G+RD+ R YG E P A+ R++ GR + +A
Sbjct: 108 TFVGVGVRDDAARLRVGYGLEVPRAVDLRALAADTLGRPDLRRA 151
>09_04_0706 +
19627024-19627380,19629945-19629976,19630657-19630751,
19632116-19632281,19632881-19632938,19633014-19633061,
19633274-19633464,19633580-19633702,19635174-19635289,
19635841-19635924,19636009-19636259,19636438-19636647
Length = 576
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/113 (18%), Positives = 48/113 (42%)
Frame = +1
Query: 283 IYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLIL 462
+ +G + ++ R++L + GR ++ + G A + + L+ +D++ T V
Sbjct: 58 VVVHGRRRGRRLRVRAMLKLNNGRTAVSPLR---GSGAVGAEAYLEGIDSSRWATAVAAA 114
Query: 463 SPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEIGLRTACCVWHTW 621
+ ++ K +L DF ++ C G + +R + WH+W
Sbjct: 115 ASMGTVSRLSLKHLLRCFDFYSIDRKFCNGTNLNTLYQYHWSMRLSTGSWHSW 167
>03_01_0417 -
3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 379 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVIL 507
GTGKT T SILQ L T R VLI + + A + +L
Sbjct: 422 GTGKTMTLVESILQ-LYTAKRRANVLICAASNSAADHVLAKLL 463
>01_07_0233 + 42191465-42191953,42191976-42192272,42192310-42192690
Length = 388
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 311 EGFSKPYVYIPRNNSSRSPMESKVGITSTSSLVS 210
EGF VY P N + +P +V +T+ S+VS
Sbjct: 166 EGFPDVMVYFPDNFMNLTPFAGEVYVTNRGSIVS 199
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,257,115
Number of Sequences: 37544
Number of extensions: 273004
Number of successful extensions: 870
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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