Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_C13
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 205 2e-53
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 205 2e-53
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 142 2e-34
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 142 2e-34
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 91 6e-19
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 82 3e-16
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 82 3e-16
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 79 4e-15
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 75 3e-14
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 75 3e-14
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 75 6e-14
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 75 6e-14
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 75 6e-14
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 74 8e-14
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 73 2e-13
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 73 2e-13
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 71 7e-13
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 71 7e-13
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 64 6e-11
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 61 8e-10
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 59 2e-09
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 56 2e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 56 2e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 56 2e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 56 3e-08
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 53 2e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 53 2e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 53 2e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 52 5e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 52 5e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 52 5e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 51 6e-07
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 51 6e-07
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 49 3e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 49 3e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 44 7e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 44 9e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 44 9e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.13
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.13
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 33 0.23
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.41
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.41
AL034489-9|CAI79279.1| 162|Caenorhabditis elegans Hypothetical ... 31 0.94
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 205 bits (500), Expect = 2e-53
Identities = 96/126 (76%), Positives = 112/126 (88%)
Frame = +1
Query: 175 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 354
K +D++ VEF++SE+V VIPTFD MGLR++LLRGIY YGFEKPSAIQQR++ I+K R
Sbjct: 5 KAEKDDMATVEFESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKAR 64
Query: 355 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQ 534
DVIAQAQSGTGKTATFSIS+LQ+LDT +RETQ LILSPTRELA QI KV+LALGD+MNVQ
Sbjct: 65 DVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQ 124
Query: 535 CHACIG 552
CHACIG
Sbjct: 125 CHACIG 130
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 548 LGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+GGTNLG DIRKLDYGQHVVSGTPG VFDMIRRR
Sbjct: 129 IGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 162
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 205 bits (500), Expect = 2e-53
Identities = 95/123 (77%), Positives = 112/123 (91%)
Frame = +1
Query: 184 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 363
++D++ VEF++SE+V +IPTFD MGLR++LLRGIY YGFEKPSAIQQR+I I+K RDVI
Sbjct: 8 NDDMATVEFESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVI 67
Query: 364 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHA 543
AQAQSGTGKTATFSIS+LQ+LDT +RETQ LILSPTRELA QI KV+LALGD+MNVQCHA
Sbjct: 68 AQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHA 127
Query: 544 CIG 552
CIG
Sbjct: 128 CIG 130
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 548 LGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRR 649
+GGTNLG DIRKLDYGQHVVSGTPG VFDMIRRR
Sbjct: 129 IGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR 162
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 142 bits (344), Expect = 2e-34
Identities = 67/108 (62%), Positives = 86/108 (79%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
+V+ +FD M L++ELLRGIY +GFEKPSAIQ+R+I+P G+DVIAQAQSGTGKTATFS+
Sbjct: 26 QVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSV 85
Query: 409 SILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
SILQ +D Q L+++PTRELA QI KV+ ALG+++NV CIG
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIG 133
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
N++ +GGT++ D RKL+ G HVV GTPG V DMI R
Sbjct: 127 NILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINR 164
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 142 bits (344), Expect = 2e-34
Identities = 67/108 (62%), Positives = 86/108 (79%)
Frame = +1
Query: 229 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 408
+V+ +FD M L++ELLRGIY +GFEKPSAIQ+R+I+P G+DVIAQAQSGTGKTATFS+
Sbjct: 26 QVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSV 85
Query: 409 SILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
SILQ +D Q L+++PTRELA QI KV+ ALG+++NV CIG
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIG 133
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 533 NVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRR 646
N++ +GGT++ D RKL+ G HVV GTPG V DMI R
Sbjct: 127 NILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINR 164
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 91.1 bits (216), Expect = 6e-19
Identities = 45/100 (45%), Positives = 66/100 (66%)
Frame = +1
Query: 253 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT 432
M L++ELLRGIY +GFEKPSAIQ+ ++ P G+DV Q+Q+G+GKT I ILQ +D
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 433 TLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
QV++L+P R +A + + + +LG +NV C+G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLG 99
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 82.2 bits (194), Expect = 3e-16
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Frame = +1
Query: 187 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 366
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 367 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQC 537
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 538 HACIGRYQSWXRYKEI 585
+G Q ++ I
Sbjct: 125 ACLVGGDQIEEQFSTI 140
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 82.2 bits (194), Expect = 3e-16
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Frame = +1
Query: 187 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 366
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 367 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIXKVILALGDFMNVQC 537
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 538 HACIGRYQSWXRYKEI 585
+G Q ++ I
Sbjct: 125 ACLVGGDQIEEQFSTI 140
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/103 (34%), Positives = 63/103 (61%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ L +LL GI+ G+EKPS IQ+ SI + G+D++A+A++GTGKT + I +++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 424 LDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
+ L+ Q +++ PTRELA Q ++ + L + ++ G
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTG 147
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 536 VMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
VM+ GGT+L DI +L+ H+V TPG + D++ + V
Sbjct: 142 VMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGV 180
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 75.4 bits (177), Expect = 3e-14
Identities = 38/107 (35%), Positives = 67/107 (62%)
Frame = +1
Query: 184 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 363
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 364 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVI 504
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI + +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 75.4 bits (177), Expect = 3e-14
Identities = 38/107 (35%), Positives = 67/107 (62%)
Frame = +1
Query: 184 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 363
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 364 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVI 504
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI + +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 74.9 bits (176), Expect = 4e-14
Identities = 45/126 (35%), Positives = 73/126 (57%)
Frame = +1
Query: 175 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 354
K+++E+ +E D EDV+ +F +G+ L G+ KPS IQQ ++ ++G+
Sbjct: 27 KVVTEE---IEKDDEEDVKE-KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGK 82
Query: 355 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQ 534
DVI A++G+GKT F+I +LQ+L + L+L+PTRELA QI + ALG + +
Sbjct: 83 DVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLI 142
Query: 535 CHACIG 552
+G
Sbjct: 143 AAVIVG 148
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 74.5 bits (175), Expect = 6e-14
Identities = 45/134 (33%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Frame = +1
Query: 160 VSSNXKILSEDLSNVEF-DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI- 333
+ K++ + + +V+ D + I +F + L+ E+L+ + T F+ P+ IQ+ ++
Sbjct: 182 IQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALP 241
Query: 334 -LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILA 510
L + ++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+
Sbjct: 242 LLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEK 301
Query: 511 LGDFM-NVQCHACI 549
+G F+ N++ H I
Sbjct: 302 MGKFIDNLKIHYAI 315
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 74.5 bits (175), Expect = 6e-14
Identities = 45/134 (33%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Frame = +1
Query: 160 VSSNXKILSEDLSNVEF-DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI- 333
+ K++ + + +V+ D + I +F + L+ E+L+ + T F+ P+ IQ+ ++
Sbjct: 207 IQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALP 266
Query: 334 -LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILA 510
L + ++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+
Sbjct: 267 LLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEK 326
Query: 511 LGDFM-NVQCHACI 549
+G F+ N++ H I
Sbjct: 327 MGKFIDNLKIHYAI 340
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 74.5 bits (175), Expect = 6e-14
Identities = 45/134 (33%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Frame = +1
Query: 160 VSSNXKILSEDLSNVEF-DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI- 333
+ K++ + + +V+ D + I +F + L+ E+L+ + T F+ P+ IQ+ ++
Sbjct: 591 IQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALP 650
Query: 334 -LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILA 510
L + ++IAQAQSGTGKTA F +++L +D L Q + L+PT ELA QI +V+
Sbjct: 651 LLLMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEK 710
Query: 511 LGDFM-NVQCHACI 549
+G F+ N++ H I
Sbjct: 711 MGKFIDNLKIHYAI 724
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 74.1 bits (174), Expect = 8e-14
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Frame = +1
Query: 184 SEDLSNVEFD-TSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 360
+ED + D S D V +F+ M L ++L+ G+ P+ IQQ I + G+D+
Sbjct: 129 NEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
Query: 361 IAQAQSGTGKTATFSISILQTLDTTLRE---TQVLILSPTRELATQIXKVILALGDFMNV 531
A A +GTGKTA F + IL+ + + T+VL+L PTRELA Q+ +V L F+ +
Sbjct: 189 CACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQL 248
Query: 532 QCHACIG 552
+ C G
Sbjct: 249 EVCLCAG 255
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/133 (32%), Positives = 66/133 (49%)
Frame = +1
Query: 154 SEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 333
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 334 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILAL 513
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 514 GDFMNVQCHACIG 552
G + ++C +G
Sbjct: 181 GKPITLKCSVIVG 193
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 527 TFNVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMI 640
T +++GG +L R+L HVV TPG + D+I
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/133 (32%), Positives = 66/133 (49%)
Frame = +1
Query: 154 SEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 333
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 334 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILAL 513
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 514 GDFMNVQCHACIG 552
G + ++C +G
Sbjct: 181 GKPITLKCSVIVG 193
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 527 TFNVMLVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMI 640
T +++GG +L R+L HVV TPG + D+I
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 70.9 bits (166), Expect = 7e-13
Identities = 38/80 (47%), Positives = 48/80 (60%)
Frame = +1
Query: 259 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 438
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 439 RETQVLILSPTRELATQIXK 498
E V+ + TRELA QI K
Sbjct: 108 GEVSVVCMCHTRELAFQISK 127
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 70.9 bits (166), Expect = 7e-13
Identities = 38/80 (47%), Positives = 48/80 (60%)
Frame = +1
Query: 259 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 438
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 439 RETQVLILSPTRELATQIXK 498
E V+ + TRELA QI K
Sbjct: 108 GEVSVVCMCHTRELAFQISK 127
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 70.9 bits (166), Expect = 7e-13
Identities = 38/80 (47%), Positives = 48/80 (60%)
Frame = +1
Query: 259 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 438
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 47 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 106
Query: 439 RETQVLILSPTRELATQIXK 498
E V+ + TRELA QI K
Sbjct: 107 GEVSVVCMCHTRELAFQISK 126
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 64.5 bits (150), Expect = 6e-11
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Frame = +1
Query: 121 LEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 300
+E IR+MT +EV K E+L ++ + + I T+ G+ +++ + + +
Sbjct: 269 IETEEIRRMTKAEV----KAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEY 324
Query: 301 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQ---VLILS 465
KP++IQ ++I I+ GRDVI A++G+GKT F + + + + L E +IL+
Sbjct: 325 SKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILA 384
Query: 466 PTRELATQIXK 498
PTRELA Q K
Sbjct: 385 PTRELAMQTYK 395
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 60.9 bits (141), Expect = 8e-10
Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Frame = +1
Query: 142 KMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 321
+M S+ K++ E L + D + TF GL + +L+ I G+EK + +Q
Sbjct: 58 RMKKSQAEKRQKLM-ESLVGPQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQ 116
Query: 322 QRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQV----LILSPTRELA 483
+ I ++ ++++ +A++G+GKT F I ++Q L ++ + V +I++PT+EL
Sbjct: 117 ESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELI 176
Query: 484 TQIXKVILAL 513
TQI K+ + L
Sbjct: 177 TQIYKLFVKL 186
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Frame = +1
Query: 271 LLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISILQTLDTTLR 441
LL+ + GF + IQ +SI P+++G+DV+A A++G+GKT F +I +L L+
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 442 E-TQVLILSPTRELATQIXKVILALGDFMNV 531
T V+I+SPTREL+ Q V+ L + N+
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNL 169
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 542 LVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIR 643
LV+GG+N + KL G ++ TPG + D ++
Sbjct: 173 LVMGGSNRSAEKDKLAKGVSILVATPGRLLDHLQ 206
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 58.0 bits (134), Expect = 5e-09
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 10/143 (6%)
Frame = +1
Query: 154 SEVSS-NXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRS 330
SE+S + +I ED N+ + ++ G DE+ + + G+ +P+ IQ+++
Sbjct: 273 SEMSDRDWRIFREDF-NISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQA 331
Query: 331 ILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLR-ETQ--------VLILSPTRELA 483
I ++ RDVI A++G+GKTA F + +L + + + E Q +I++PTRELA
Sbjct: 332 IPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELA 391
Query: 484 TQIXKVILALGDFMNVQCHACIG 552
QI + G + ++ + IG
Sbjct: 392 QQIEEETNKFGKLLGIKTVSVIG 414
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 56.4 bits (130), Expect = 2e-08
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Frame = +1
Query: 199 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 372
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 373 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIXKVIL 507
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 508 ALGDFMNVQCHACIGRYQSW 567
N+Q G +++
Sbjct: 244 KFSYKSNIQTAILYGGRENY 263
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 56.4 bits (130), Expect = 2e-08
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Frame = +1
Query: 199 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 372
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 373 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIXKVIL 507
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 508 ALGDFMNVQCHACIGRYQSW 567
N+Q G +++
Sbjct: 228 KFSYKSNIQTAILYGGRENY 247
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 56.4 bits (130), Expect = 2e-08
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Frame = +1
Query: 199 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 372
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 373 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIXKVIL 507
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 508 ALGDFMNVQCHACIGRYQSW 567
N+Q G +++
Sbjct: 225 KFSYKSNIQTAILYGGRENY 244
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 423
F+ L L G+ + KP+ IQ+ +I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 424 LDTTLRETQ----VLILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L LI+SPTRELA Q I A+G C IG
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIG 184
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 26/132 (19%)
Frame = +1
Query: 175 KILSEDLSNVEFDTSEDVEV----------IPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 324
++ S LS + FD E++ V I F + L + + I T G+++P+ +Q+
Sbjct: 135 ELFSGQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQK 194
Query: 325 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTL-----DTTLRET-----------QVL 456
SI + GRD+++ AQ+G+GKTA F + ++ + D R L
Sbjct: 195 YSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSAL 254
Query: 457 ILSPTRELATQI 492
+LSPTREL+ QI
Sbjct: 255 VLSPTRELSLQI 266
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 53.2 bits (122), Expect = 2e-07
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Frame = +1
Query: 259 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGR-DVIAQAQSGTGKTATFSISIL------ 417
L +E+L I GF +P+ IQ + V+ R DV+ A++G+GKT F I ++
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES 221
Query: 418 -----QTLDTTLRETQVLILSPTRELATQIXKVILAL 513
+T T +R + LI++PTREL QI K I AL
Sbjct: 222 SDDSQETESTEVRGPRALIVAPTRELVIQIMKHINAL 258
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Frame = +1
Query: 175 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 354
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 355 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQI 492
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Frame = +1
Query: 175 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 354
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 355 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQI 492
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Frame = +1
Query: 250 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 429
+ G ++ I GFEKPS IQ + ++ G+D I +Q+G+GKT F + L +D
Sbjct: 88 AFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHID 147
Query: 430 TTLRETQ-----------VLILSPTRELATQI 492
L + + VL+LSPTRELA QI
Sbjct: 148 AQLAQYEKNDEEQKPSPFVLVLSPTRELAQQI 179
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Frame = +1
Query: 175 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 354
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 355 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQI 492
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +1
Query: 226 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 405
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 406 ISIL-QTLDTTLRET--------QVLILSPTRELATQI 492
+ I+ + +D T + +IL+PTREL QI
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +1
Query: 226 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 405
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 406 ISIL-QTLDTTLRET--------QVLILSPTRELATQI 492
+ I+ + +D T + +IL+PTREL QI
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = +1
Query: 226 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 405
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 406 ISIL-QTLDTTLRET--------QVLILSPTRELATQI 492
+ I+ + +D T + +IL+PTREL QI
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 51.2 bits (117), Expect = 6e-07
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Frame = +1
Query: 157 EVSSNXKILSEDLSNVEFDTS-------EDVEVIP--TFDSMGLRDELLRGIYTYGFEKP 309
EV S KI + D + FD S + V + P +F + + R + G+ +
Sbjct: 262 EVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRT 321
Query: 310 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--TLDTTLR-------ETQVLIL 462
+ IQQ ++ + G+D++A AQ+G+GKTA F + I+ L+ L + +IL
Sbjct: 322 TPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIIL 381
Query: 463 SPTRELATQI 492
+PTRELA QI
Sbjct: 382 TPTRELADQI 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 51.2 bits (117), Expect = 6e-07
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Frame = +1
Query: 157 EVSSNXKILSEDLSNVEFDTS-------EDVEVIP--TFDSMGLRDELLRGIYTYGFEKP 309
EV S KI + D + FD S + V + P +F + + R + G+ +
Sbjct: 262 EVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRT 321
Query: 310 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--TLDTTLR-------ETQVLIL 462
+ IQQ ++ + G+D++A AQ+G+GKTA F + I+ L+ L + +IL
Sbjct: 322 TPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIIL 381
Query: 463 SPTRELATQI 492
+PTRELA QI
Sbjct: 382 TPTRELADQI 391
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Frame = +1
Query: 292 YG-FEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----V 453
YG F+KP+ IQ S + GRD+I+ A++G+GKT F + L + + V
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 454 LILSPTRELATQIXKV 501
L+L PTRELA Q+ +V
Sbjct: 206 LVLLPTRELAQQVQEV 221
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 545 VLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMI 640
+ GG + G R L+ G +V TPG + D +
Sbjct: 236 LFGGASKGPQARDLERGVDIVVATPGRLLDFL 267
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Frame = +1
Query: 271 LLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF----SISILQTLDTTL 438
L+ I +E+P+ IQ +I + GRDV+ A++G+GKTA + + I+ D
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 439 RETQV-LILSPTRELATQIXKVILALGDFMNVQCHACIGRYQSWXRYKEI 585
E V +I+ PTRELA Q+ + N+ G W + E+
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNEL 385
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = +1
Query: 202 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 381
VE +E + ++ + GL +L + + IQ I ++ G DV+ QA++
Sbjct: 369 VEIRNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETS 428
Query: 382 TGKTATFSISILQTLDTTLRETQ----------VLILSPTRELATQIXKVI 504
GKTA F + I+ + ET+ LIL+PTRELA QI + +
Sbjct: 429 AGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEAL 479
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 49.2 bits (112), Expect = 3e-06
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Frame = +1
Query: 142 KMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMG-LRDELLRGIYTYGFEKPSAI 318
KM V+++ KI D V ++ + +FD L +L + +P+ I
Sbjct: 704 KMFEDAVNNDDKI-DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPI 762
Query: 319 QQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--------DTTLRE--TQVLILSP 468
Q+ S PI+ G DV+A A +G+GKT F I + L D T + ++LI++P
Sbjct: 763 QRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAP 822
Query: 469 TRELATQIXKVILALGDFMNVQCHACIGRY 558
TREL Q L ++C G Y
Sbjct: 823 TRELVNQTFTTARQLTYETGLKCGLAFGGY 852
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 49.2 bits (112), Expect = 3e-06
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Frame = +1
Query: 142 KMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMG-LRDELLRGIYTYGFEKPSAI 318
KM V+++ KI D V ++ + +FD L +L + +P+ I
Sbjct: 704 KMFEDAVNNDDKI-DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPI 762
Query: 319 QQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--------DTTLRE--TQVLILSP 468
Q+ S PI+ G DV+A A +G+GKT F I + L D T + ++LI++P
Sbjct: 763 QRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAP 822
Query: 469 TRELATQIXKVILALGDFMNVQCHACIGRY 558
TREL Q L ++C G Y
Sbjct: 823 TRELVNQTFTTARQLTYETGLKCGLAFGGY 852
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 48.0 bits (109), Expect = 6e-06
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
Frame = +1
Query: 283 IYTYGFEKPSAIQQRSILPIVKGR-DVIAQAQSGTGKTATFSISIL-----------QTL 426
I+ + F +P+ IQ + V+ R DV+ A++G+GKT F I ++ +T
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 427 DTTLRETQVLILSPTRELATQIXKVILAL 513
T +R + LI++PTREL QI K I AL
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINAL 91
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 44.4 bits (100), Expect = 7e-05
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Frame = +1
Query: 232 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 411
+I F + LL + +PS IQ +SI + + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 412 IL-------QTLDTTLRETQVL---ILSPTRELATQ 489
++ Q D + + L +L PTRELA Q
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 244 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 420
F+ G+ EL + + + P+A+Q +I I+ G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 554 GTNLGXDIRKLDYGQHVVSGTPGXVFDMI 640
G N+ +R L+ G +V GTP VFD+I
Sbjct: 321 GENMNQILRTLETGCDIVVGTPSRVFDLI 349
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Frame = +1
Query: 295 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-----QTLDTTLRETQ--- 450
G P+AIQ + I + GRD+I A +G+GKT TF + ++ Q + ++
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 451 VLILSPTRELATQIXKVILALGD 519
LI+ P+RELA QI +I+ + D
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFD 291
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 542 LVLGGTNLGXDIRKLDYGQHVVSGTPGXVFDMIRRRV 652
L +GG +G + + G H+V TPG + DM+ +++
Sbjct: 305 LCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKI 341
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +1
Query: 259 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTT- 435
L ELL ++ ++ + +Q S ++ DV+ ++ +G+GKT F + +++ +
Sbjct: 17 LGPELLE-VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAK 75
Query: 436 LRETQV--LILSPTRELATQIXKVILALGDFMNVQCHACIG 552
L+ + LILSP+REL +QI VI + +N+ G
Sbjct: 76 LQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTG 116
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Frame = +1
Query: 310 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT---------LDTTLRETQVLIL 462
+A+QQ SI I +GR ++ +A +G GKT F I ++ + T +LI+
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIM 176
Query: 463 SPTRELATQI---XKVILALGDFMNVQ 534
+ T L Q+ ++IL L NV+
Sbjct: 177 ASTSALVDQLFNRCELILGLQCMDNVE 203
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 295 GFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPT 471
GF+ + IQ + + + + VI A +G+GKTA +++L+ + T E + + ++P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 472 RELATQI 492
++AT++
Sbjct: 1377 EDMATKV 1383
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 12/85 (14%)
Frame = +1
Query: 316 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT---------LDTTLRETQVLILSP 468
+QQ SI I +GR ++ +A +G GKT F I ++ ++T +LI++
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 469 TRELATQI---XKVILALGDFMNVQ 534
T L Q+ ++IL L NV+
Sbjct: 79 TSALVDQLFNRCELILGLQCMDNVE 103
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.41
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = +1
Query: 115 KNLEANXIRKMTSSEVSSNXKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTY 294
KNLEA K+TSS V N S + ++ TS+ + I + + + +
Sbjct: 85 KNLEA---LKVTSSWVQ-NATTFS---ATIDSSTSQKLSQIELPEHLTVPSAISTWFPVQ 137
Query: 295 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT-TLRETQVLILSPT 471
PS + P ++ RDV A +G+GKT + + +L + + + Q +IL P
Sbjct: 138 YAVLPSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPV 197
Query: 472 RELATQI 492
+ L QI
Sbjct: 198 QTLVAQI 204
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.9 bits (69), Expect = 0.41
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Frame = +1
Query: 310 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI----------SILQTLDTTLRETQVLI 459
+A+QQ+SI I R ++ A +G GKT F I +L + TT T +LI
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPT-ILI 174
Query: 460 LSPTRELATQI---XKVILALGDFMNV 531
L+ T L Q+ +V+L L D ++
Sbjct: 175 LANTNSLVEQLFNRCEVLLGLIDMEDI 201
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 358 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIXKVILALGDFMNVQC 537
V Q GTGKT T ++ + + + ++ QV++L+PTRE I + M ++
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 538 H 540
H
Sbjct: 142 H 142
>AL034489-9|CAI79279.1| 162|Caenorhabditis elegans Hypothetical
protein Y7A5A.11 protein.
Length = 162
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -1
Query: 356 SLPLTIGKMLLC*IAEGF-SKPYVYIPRNNSS---RSPMESKVGITSTSSLVSNSTFD 195
++PLT LC + + S+ ++Y+PR+NSS R ++ +G S ++ TF+
Sbjct: 13 AVPLTYSSSCLCSLRQSIKSESHMYVPRHNSSVLVRGSKDADIGERSDTTSKFTKTFN 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,722,556
Number of Sequences: 27780
Number of extensions: 262785
Number of successful extensions: 768
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -